RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 CXCL13O43927 109 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 EIF4E2O60573 245 aaKnown RBP2.99□□□□□ -1.93
PRPF39-209ENST00000556353 RAMP1O60894 148 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 ATG12O94817 140 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 IFNA7P01567 189 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 CD8AP01732 235 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 CRYGDP07320 174 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 IFI6P09912 130 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 CD79AP11912 226 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 ZNF250P15622 560 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 TBPP20226 339 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 IL12AP29459 219 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 GABRA3P34903 492 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 HPCAL1P37235 193 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 LEPP41159 167 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 OR10A3P58181 314 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 UBE2MP61081 183 aaKnown RBP2.99□□□□□ -1.93
PRPF39-209ENST00000556353 RHOBP62745 196 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 HIST1H3AP68431 136 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 HBA1P69905 142 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 H3F3AP84243 136 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 EWSR1Q01844 656 aaKnown RBP eCLIP2.99□□□□□ -1.93
PRPF39-209ENST00000556353 BSPH1Q075Z2 132 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 BAXQ07812 192 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 FUT5Q11128 374 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 GABRA6Q16445 453 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 LAMTOR1Q6IAA8 161 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 IL34Q6ZMJ4 242 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 C19orf35Q6ZS72 473 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 Q6ZT83 130 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 HIST2H3AQ71DI3 136 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 HSD17B13Q7Z5P4 300 aaPredicted RBP2.99□□□□□ -1.93
PRPF39-209ENST00000556353 H1FOOQ8IZA3 346 aaPredicted RBP2.99□□□□□ -1.93
PRPF39-209ENST00000556353 KRTCAP2Q8N6L1 136 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 UBAC2Q8NBM4 344 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 OR51S1Q8NGJ8 323 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 OR4X1Q8NH49 305 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 ZNRF2Q8NHG8 242 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 LYPD6BQ8NI32 183 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 PLPPR1Q8TBJ4 325 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 SFXN5Q8TD22 340 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 GNPDA2Q8TDQ7 276 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 CANT1Q8WVQ1 401 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 OR5P2Q8WZ92 322 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 SMIM8Q96KF7 97 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 DNAJC30Q96LL9 226 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 MS4A4EQ96PG1 132 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 RBP7Q96R05 134 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 OR52E6Q96RD3 313 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 TBX15Q96SF7 602 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 GINS3Q9BRX5 216 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 FAIM2Q9BWQ8 316 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 NAA50Q9GZZ1 169 aaKnown RBP2.99□□□□□ -1.93
PRPF39-209ENST00000556353 TMEM126AQ9H061 195 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 ABCG5Q9H222 651 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 MAP1LC3AQ9H492 121 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 ZNF385DQ9H6B1 395 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 EFCAB1Q9HAE3 211 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 TMEM38BQ9NVV0 291 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 AK6Q9Y3D8 172 aaKnown RBP2.99□□□□□ -1.93
PRPF39-209ENST00000556353 DNAJC15Q9Y5T4 150 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 V9GYS6 101 aa2.99□□□□□ -1.93
PRPF39-209ENST00000556353 RYR3Q15413 4870 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 MEIKINA0A087WXM9 373 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 DPRXA6NFQ7 191 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 TAAR5O14804 337 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 GYG2O15488 501 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 LYZL6O75951 148 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 OR7C1O76099 320 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-209ENST00000556353 DIRAS1O95057 198 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 C6orf47O95873 294 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 IGF1P05019 195 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 HMGN2P05204 90 aaKnown RBP2.98□□□□□ -1.93
PRPF39-209ENST00000556353 SULT1A3P0DMM9 295 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 SULT1A4P0DMN0 295 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 BCKDHAP12694 445 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 IL7P13232 177 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 TAC1P20366 129 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 COX5AP20674 150 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 TCL1AP56279 114 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 TAS2R31P59538 309 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 RPS28P62857 69 aaKnown RBP2.98□□□□□ -1.93
PRPF39-209ENST00000556353 RPL38P63173 70 aaKnown RBP2.98□□□□□ -1.93
PRPF39-209ENST00000556353 PAFAH1B2P68402 229 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 CDK5Q00535 292 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 RUNX1Q01196 453 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 OR10J3Q5JRS4 329 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 SOHLH1Q5JUK2 328 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 COL5A1-AS1Q5SY13 56 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 HBMQ6B0K9 141 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 C11orf71Q6IPW1 123 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 FBXW12Q6X9E4 464 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 ZCCHC23Q6ZST2 131 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 HMGN2P46Q86SG4 172 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 OR5D16Q8NGK9 328 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 OR10G9Q8NGN4 311 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 OR10R2Q8NGX6 335 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 SLC7A13Q8TCU3 470 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 DLX4Q92988 240 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-209ENST00000556353 CCDC126Q96EE4 140 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms