RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 C4orf46Q504U0 113 aa15.63■□□□□ 0.09
RCCD1-205ENST00000556333 Q6ZRM9 215 aa15.63■□□□□ 0.09
RCCD1-205ENST00000556333 NECAP1Q8NC96 275 aa15.63■□□□□ 0.09
RCCD1-205ENST00000556333 P2RX4Q99571 388 aa15.63■□□□□ 0.09
RCCD1-205ENST00000556333 ENY2Q9NPA8 101 aa15.63■□□□□ 0.09
RCCD1-205ENST00000556333 C9orf170A2RU37 121 aa15.62■□□□□ 0.09
RCCD1-205ENST00000556333 NXPH3O95157 252 aa15.62■□□□□ 0.09
RCCD1-205ENST00000556333 OR8U8P0C7N1 319 aa15.62■□□□□ 0.09
RCCD1-205ENST00000556333 ERHP84090 104 aaKnown RBP15.62■□□□□ 0.09
RCCD1-205ENST00000556333 EXOSC2Q13868 293 aaKnown RBP15.62■□□□□ 0.09
RCCD1-205ENST00000556333 C15orf32Q32M92 178 aa15.62■□□□□ 0.09
RCCD1-205ENST00000556333 SLC25A24Q6NUK1 477 aa15.62■□□□□ 0.09
RCCD1-205ENST00000556333 LINC00482Q8N8I6 264 aa15.62■□□□□ 0.09
RCCD1-205ENST00000556333 NUDT15Q9NV35 164 aa15.62■□□□□ 0.09
RCCD1-205ENST00000556333 THYN1Q9P016 225 aa15.62■□□□□ 0.09
RCCD1-205ENST00000556333 IGHV4OR15-8A0A075B7B6 117 aa15.61■□□□□ 0.09
RCCD1-205ENST00000556333 A0A087WW49 117 aa15.61■□□□□ 0.09
RCCD1-205ENST00000556333 DUXBA0A1W2PPF3 345 aa15.61■□□□□ 0.09
RCCD1-205ENST00000556333 LINC01619G3V211 115 aa15.61■□□□□ 0.09
RCCD1-205ENST00000556333 HSPB1P04792 205 aaKnown RBP15.61■□□□□ 0.09
RCCD1-205ENST00000556333 SULT1A3P0DMM9 295 aa15.61■□□□□ 0.09
RCCD1-205ENST00000556333 SULT1A4P0DMN0 295 aa15.61■□□□□ 0.09
RCCD1-205ENST00000556333 HOXA1P49639 335 aaPredicted RBP15.61■□□□□ 0.09
RCCD1-205ENST00000556333 LYG2Q86SG7 212 aa15.61■□□□□ 0.09
RCCD1-205ENST00000556333 ENKURQ8TC29 256 aa15.61■□□□□ 0.09
RCCD1-205ENST00000556333 FANCD2OSQ96PS1 177 aa15.61■□□□□ 0.09
RCCD1-205ENST00000556333 NDUFB8O95169 186 aa15.6■□□□□ 0.09
RCCD1-205ENST00000556333 IFITM3Q01628 133 aa15.6■□□□□ 0.09
RCCD1-205ENST00000556333 DHRS2Q13268 280 aa15.6■□□□□ 0.09
RCCD1-205ENST00000556333 COQ8AQ8NI60 647 aa15.6■□□□□ 0.09
RCCD1-205ENST00000556333 PEF1Q9UBV8 284 aaKnown RBP15.6■□□□□ 0.09
RCCD1-205ENST00000556333 F11RQ9Y624 299 aaKnown RBP15.6■□□□□ 0.09
RCCD1-205ENST00000556333 S4R3C0 116 aa15.6■□□□□ 0.09
RCCD1-205ENST00000556333 IGLV11-55A0A075B6I3 123 aa15.59■□□□□ 0.09
RCCD1-205ENST00000556333 IGHV3-23P01764 117 aa15.59■□□□□ 0.09
RCCD1-205ENST00000556333 HOXB5P09067 269 aa15.59■□□□□ 0.09
RCCD1-205ENST00000556333 H2AFB2P0C5Z0 115 aa15.59■□□□□ 0.09
RCCD1-205ENST00000556333 SLURP1P55000 103 aa15.59■□□□□ 0.09
RCCD1-205ENST00000556333 DEFA1P59665 94 aa15.59■□□□□ 0.09
RCCD1-205ENST00000556333 DEFA3P59666 94 aa15.59■□□□□ 0.09
RCCD1-205ENST00000556333 SPCS3P61009 180 aa15.59■□□□□ 0.09
RCCD1-205ENST00000556333 SMCO1Q147U7 214 aa15.59■□□□□ 0.09
RCCD1-205ENST00000556333 NMSQ5H8A3 153 aa15.59■□□□□ 0.09
RCCD1-205ENST00000556333 ZNF343Q6P1L6 599 aa15.59■□□□□ 0.09
RCCD1-205ENST00000556333 OR2C3Q8N628 320 aa15.59■□□□□ 0.09
RCCD1-205ENST00000556333 LRTM2Q8N967 370 aa15.59■□□□□ 0.09
RCCD1-205ENST00000556333 OR1S1Q8NH92 325 aa15.59■□□□□ 0.09
RCCD1-205ENST00000556333 EEF1AKMT3Q96AZ1 226 aa15.59■□□□□ 0.09
RCCD1-205ENST00000556333 RANGRFQ9HD47 186 aaPredicted RBP15.59■□□□□ 0.09
RCCD1-205ENST00000556333 TRRAPQ9Y4A5 3859 aa15.59■□□□□ 0.09
RCCD1-205ENST00000556333 CEBPZOSA8MTT3 80 aa15.58■□□□□ 0.08
RCCD1-205ENST00000556333 IGLL1P15814 213 aa15.58■□□□□ 0.08
RCCD1-205ENST00000556333 SNCAP37840 140 aa15.58■□□□□ 0.08
RCCD1-205ENST00000556333 FHL3Q13643 280 aa15.58■□□□□ 0.08
RCCD1-205ENST00000556333 PDLIM3Q53GG5 364 aaPredicted RBP15.58■□□□□ 0.08
RCCD1-205ENST00000556333 WFDC9Q8NEX5 89 aa15.58■□□□□ 0.08
RCCD1-205ENST00000556333 OR52B4Q8NGK2 314 aa15.58■□□□□ 0.08
RCCD1-205ENST00000556333 OR1L6Q8NGR2 347 aa15.58■□□□□ 0.08
RCCD1-205ENST00000556333 C1QL4Q86Z23 238 aa15.57■□□□□ 0.08
RCCD1-205ENST00000556333 OR52E5Q8NH55 327 aa15.57■□□□□ 0.08
RCCD1-205ENST00000556333 MISP3Q96FF7 219 aa15.57■□□□□ 0.08
RCCD1-205ENST00000556333 RCC1LQ96I51 464 aaKnown RBP15.57■□□□□ 0.08
RCCD1-205ENST00000556333 CXorf58Q96LI9 332 aa15.57■□□□□ 0.08
RCCD1-205ENST00000556333 TMED3Q9Y3Q3 217 aa15.57■□□□□ 0.08
RCCD1-205ENST00000556333 DMRT1Q9Y5R6 373 aa15.57■□□□□ 0.08
RCCD1-205ENST00000556333 VWFP04275 2813 aa15.57■□□□□ 0.08
RCCD1-205ENST00000556333 A0A1B0GU03 582 aa15.56■□□□□ 0.08
RCCD1-205ENST00000556333 G3V4G9 280 aa15.56■□□□□ 0.08
RCCD1-205ENST00000556333 DUS4LO95620 317 aaKnown RBP15.56■□□□□ 0.08
RCCD1-205ENST00000556333 TRBV12-3P01733 135 aa15.56■□□□□ 0.08
RCCD1-205ENST00000556333 ZP3P21754 424 aa15.56■□□□□ 0.08
RCCD1-205ENST00000556333 OXLD1Q5BKU9 147 aa15.56■□□□□ 0.08
RCCD1-205ENST00000556333 OR1P1Q8NH06 330 aa15.56■□□□□ 0.08
RCCD1-205ENST00000556333 DCUN1D4Q92564 292 aa15.56■□□□□ 0.08
RCCD1-205ENST00000556333 HEYLQ9NQ87 328 aaPredicted RBP15.56■□□□□ 0.08
RCCD1-205ENST00000556333 CACFD1Q9UGQ2 172 aa15.56■□□□□ 0.08
RCCD1-205ENST00000556333 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.55■□□□□ 0.08
RCCD1-205ENST00000556333 IGHV3-21A0A0B4J1V1 117 aa15.55■□□□□ 0.08
RCCD1-205ENST00000556333 MFSD2BA6NFX1 497 aa15.55■□□□□ 0.08
RCCD1-205ENST00000556333 OVOL1O14753 267 aa15.55■□□□□ 0.08
RCCD1-205ENST00000556333 IFNA21P01568 189 aa15.55■□□□□ 0.08
RCCD1-205ENST00000556333 HOXD3P31249 432 aaPredicted RBP15.55■□□□□ 0.08
RCCD1-205ENST00000556333 SUB1P53999 127 aaKnown RBP eCLIP15.55■□□□□ 0.083e-7■■■□□ 19
RCCD1-205ENST00000556333 MFAP2P55001 183 aa15.55■□□□□ 0.08
RCCD1-205ENST00000556333 RPEL1Q2QD12 228 aa15.55■□□□□ 0.08
RCCD1-205ENST00000556333 KLK9Q2XQG4 91 aa15.55■□□□□ 0.08
RCCD1-205ENST00000556333 FAM209BQ5JX69 171 aa15.55■□□□□ 0.08
RCCD1-205ENST00000556333 GGNBP1Q5YKI7 109 aa15.55■□□□□ 0.08
RCCD1-205ENST00000556333 CLEC19AQ6UXS0 136 aa15.55■□□□□ 0.08
RCCD1-205ENST00000556333 ZNF114Q8NC26 417 aa15.55■□□□□ 0.08
RCCD1-205ENST00000556333 DLX4Q92988 240 aaPredicted RBP15.55■□□□□ 0.08
RCCD1-205ENST00000556333 MCRIP2Q9BUT9 160 aaKnown RBP15.55■□□□□ 0.08
RCCD1-205ENST00000556333 KLK9Q9UKQ9 250 aa15.55■□□□□ 0.08
RCCD1-205ENST00000556333 TRBV7-1A0A0A6YYK4 115 aa15.54■□□□□ 0.08
RCCD1-205ENST00000556333 ADAP1O75689 374 aa15.54■□□□□ 0.08
RCCD1-205ENST00000556333 AARDQ4LEZ3 155 aa15.54■□□□□ 0.08
RCCD1-205ENST00000556333 UXS1Q8NBZ7 420 aa15.54■□□□□ 0.08
RCCD1-205ENST00000556333 PINX1Q96BK5 328 aaKnown RBP15.54■□□□□ 0.08
RCCD1-205ENST00000556333 SEC22CQ9BRL7 303 aa15.54■□□□□ 0.08
RCCD1-205ENST00000556333 HIPK2Q9H2X6 1198 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms