RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 LPAR5Q9H1C0 372 aa4.96□□□□□ -1.62
ATXN3-236ENST00000556220 TMEM138Q9NPI0 162 aa4.96□□□□□ -1.62
ATXN3-236ENST00000556220 MRPL27Q9P0M9 148 aaKnown RBP4.96□□□□□ -1.62
ATXN3-236ENST00000556220 ABRACLQ9P1F3 81 aa4.96□□□□□ -1.62
ATXN3-236ENST00000556220 ZNF221Q9UK13 617 aa4.96□□□□□ -1.62
ATXN3-236ENST00000556220 V9GY05 133 aa4.96□□□□□ -1.62
ATXN3-236ENST00000556220 IGLV2-18A0A075B6J9 118 aa4.95□□□□□ -1.62
ATXN3-236ENST00000556220 CGB1A6NKQ9 187 aa4.95□□□□□ -1.62
ATXN3-236ENST00000556220 KRTAP29-1A8MX34 341 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-236ENST00000556220 SOCS1O15524 211 aa4.95□□□□□ -1.62
ATXN3-236ENST00000556220 CD3GP09693 182 aa4.95□□□□□ -1.62
ATXN3-236ENST00000556220 HTR2CP28335 458 aa4.95□□□□□ -1.62
ATXN3-236ENST00000556220 BDKRB2P30411 391 aa4.95□□□□□ -1.62
ATXN3-236ENST00000556220 ARL3P36405 182 aa4.95□□□□□ -1.62
ATXN3-236ENST00000556220 PPP5CP53041 499 aa4.95□□□□□ -1.62
ATXN3-236ENST00000556220 MRPL28Q13084 256 aaKnown RBP4.95□□□□□ -1.62
ATXN3-236ENST00000556220 KLF9Q13886 244 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-236ENST00000556220 OXA1LQ15070 435 aa4.95□□□□□ -1.62
ATXN3-236ENST00000556220 PRSS8Q16651 343 aa4.95□□□□□ -1.62
ATXN3-236ENST00000556220 C1orf134Q5TEV5 83 aa4.95□□□□□ -1.62
ATXN3-236ENST00000556220 GLT8D1Q68CQ7 371 aa4.95□□□□□ -1.62
ATXN3-236ENST00000556220 UNQ9165/PRO28630Q6UXU0 137 aa4.95□□□□□ -1.62
ATXN3-236ENST00000556220 LINC00299Q6ZSB3 139 aa4.95□□□□□ -1.62
ATXN3-236ENST00000556220 Q6ZTC4 211 aa4.95□□□□□ -1.62
ATXN3-236ENST00000556220 OR4D10Q8NGI6 311 aa4.95□□□□□ -1.62
ATXN3-236ENST00000556220 OR52I2Q8NH67 350 aa4.95□□□□□ -1.62
ATXN3-236ENST00000556220 CD300LFQ8TDQ1 290 aa4.95□□□□□ -1.62
ATXN3-236ENST00000556220 SCARB1Q8WTV0 552 aa4.95□□□□□ -1.62
ATXN3-236ENST00000556220 SRSF12Q8WXF0 261 aaKnown RBP4.95□□□□□ -1.62
ATXN3-236ENST00000556220 FAM3DQ96BQ1 224 aa4.95□□□□□ -1.62
ATXN3-236ENST00000556220 HDHD3Q9BSH5 251 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-236ENST00000556220 BANF2Q9H503 90 aa4.95□□□□□ -1.62
ATXN3-236ENST00000556220 PLGRKTQ9HBL7 147 aa4.95□□□□□ -1.62
ATXN3-236ENST00000556220 SLC35D1Q9NTN3 355 aa4.95□□□□□ -1.62
ATXN3-236ENST00000556220 RBMX2Q9Y388 322 aaKnown RBP4.95□□□□□ -1.62
ATXN3-236ENST00000556220 AGRNO00468 2067 aa4.95□□□□□ -1.62
ATXN3-236ENST00000556220 IFNA10P01566 189 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 IGHV3-23P01764 117 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 AMBPP02760 352 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 CD2P06729 351 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 FCER2P06734 321 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 ZNF735P0CB33 412 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 INAFM2P0DMQ5 153 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 CEACAM6P40199 344 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 PPP3R1P63098 170 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 TMEM187Q14656 261 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 TNXAQ16473 311 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 LAMTOR1Q6IAA8 161 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 FAAP20Q6NZ36 180 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 GLIPR1L1Q6UWM5 242 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 CLEC19AQ6UXS0 136 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 SLC25A42Q86VD7 318 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 APRG1Q8IVJ8 170 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 CENPSQ8N2Z9 138 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 FAM89BQ8N5H3 189 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 TEX45Q8NA69 505 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 Q8NAQ8 132 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 PTX4Q96A99 478 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 HARBI1Q96MB7 349 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 MYCBPQ99417 103 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-236ENST00000556220 NDUFAF3Q9BU61 184 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 SELENOIQ9C0D9 397 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 RHBDL2Q9NX52 303 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 EXTL2Q9UBQ6 330 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 ANAPC10Q9UM13 185 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 UFC1Q9Y3C8 167 aa4.94□□□□□ -1.62
ATXN3-236ENST00000556220 MEIS3P1A6NDR6 274 aa4.93□□□□□ -1.62
ATXN3-236ENST00000556220 OR4C46A6NHA9 309 aa4.93□□□□□ -1.62
ATXN3-236ENST00000556220 EPM2AB3EWF7 344 aa4.93□□□□□ -1.62
ATXN3-236ENST00000556220 M0R1X1 148 aa4.93□□□□□ -1.62
ATXN3-236ENST00000556220 MFNGO00587 321 aa4.93□□□□□ -1.62
ATXN3-236ENST00000556220 PDCD6O75340 191 aa4.93□□□□□ -1.62
ATXN3-236ENST00000556220 ARL6IP5O75915 188 aa4.93□□□□□ -1.62
ATXN3-236ENST00000556220 APOA1P02647 267 aa4.93□□□□□ -1.62
ATXN3-236ENST00000556220 CLEC3BP05452 202 aa4.93□□□□□ -1.62
ATXN3-236ENST00000556220 RBMY1A1P0DJD3 496 aaKnown RBP4.93□□□□□ -1.62
ATXN3-236ENST00000556220 RBMY1CP0DJD4 496 aa4.93□□□□□ -1.62
ATXN3-236ENST00000556220 MYOD1P15172 320 aa4.93□□□□□ -1.62
ATXN3-236ENST00000556220 MYL9P24844 172 aa4.93□□□□□ -1.62
ATXN3-236ENST00000556220 PSMB6P28072 239 aa4.93□□□□□ -1.62
ATXN3-236ENST00000556220 TAS2R20P59543 309 aa4.93□□□□□ -1.62
ATXN3-236ENST00000556220 ZNF846Q147U1 533 aa4.93□□□□□ -1.62
ATXN3-236ENST00000556220 ZNF880Q6PDB4 577 aa4.93□□□□□ -1.62
ATXN3-236ENST00000556220 BORCS5Q969J3 196 aa4.93□□□□□ -1.62
ATXN3-236ENST00000556220 MRPL48Q96GC5 212 aaKnown RBP4.93□□□□□ -1.62
ATXN3-236ENST00000556220 DIRAS2Q96HU8 199 aa4.93□□□□□ -1.62
ATXN3-236ENST00000556220 SPIN2AQ99865 258 aa4.93□□□□□ -1.62
ATXN3-236ENST00000556220 SPIN2BQ9BPZ2 258 aa4.93□□□□□ -1.62
ATXN3-236ENST00000556220 WDR12Q9GZL7 423 aaKnown RBP4.93□□□□□ -1.62
ATXN3-236ENST00000556220 DEFB131BA0A096LNP1 70 aa4.92□□□□□ -1.62
ATXN3-236ENST00000556220 IGHV4-28A0A0C4DH34 117 aa4.92□□□□□ -1.62
ATXN3-236ENST00000556220 RGS5O15539 181 aa4.92□□□□□ -1.62
ATXN3-236ENST00000556220 GSTZ1O43708 216 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-236ENST00000556220 NOL3O60936 208 aaKnown RBP4.92□□□□□ -1.62
ATXN3-236ENST00000556220 CRTAPO75718 401 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-236ENST00000556220 NAPSAO96009 420 aa4.92□□□□□ -1.62
ATXN3-236ENST00000556220 CA1P00915 261 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-236ENST00000556220 IFNA21P01568 189 aa4.92□□□□□ -1.62
ATXN3-236ENST00000556220 IFNA17P01571 189 aa4.92□□□□□ -1.62
ATXN3-236ENST00000556220 CD74P04233 296 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms