RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 HSPE1P61604 102 aaKnown RBP11.61□□□□□ -0.55
ACTN1-217ENST00000556203 PRCDQ00LT1 54 aa11.61□□□□□ -0.55
ACTN1-217ENST00000556203 DHODHQ02127 395 aa11.61□□□□□ -0.55
ACTN1-217ENST00000556203 DEFB121Q5J5C9 76 aa11.61□□□□□ -0.55
ACTN1-217ENST00000556203 SLC25A24Q6NUK1 477 aa11.61□□□□□ -0.55
ACTN1-217ENST00000556203 HAPLN4Q86UW8 402 aa11.61□□□□□ -0.55
ACTN1-217ENST00000556203 SGPP2Q8IWX5 399 aa11.61□□□□□ -0.55
ACTN1-217ENST00000556203 LHFPL5Q8TAF8 219 aa11.61□□□□□ -0.55
ACTN1-217ENST00000556203 TMEM230Q96A57 120 aa11.61□□□□□ -0.55
ACTN1-217ENST00000556203 RRNAD1Q96FB5 475 aaKnown RBP11.61□□□□□ -0.55
ACTN1-217ENST00000556203 ZNF256Q9Y2P7 627 aaPredicted RBP11.61□□□□□ -0.55
ACTN1-217ENST00000556203 TRBV7-1A0A0A6YYK4 115 aa11.6□□□□□ -0.55
ACTN1-217ENST00000556203 A0A0G2JRQ6 117 aa11.6□□□□□ -0.55
ACTN1-217ENST00000556203 GGCTO75223 188 aaKnown RBP11.6□□□□□ -0.55
ACTN1-217ENST00000556203 LY86O95711 162 aa11.6□□□□□ -0.55
ACTN1-217ENST00000556203 AKR1C4P17516 323 aa11.6□□□□□ -0.55
ACTN1-217ENST00000556203 ARL3P36405 182 aa11.6□□□□□ -0.55
ACTN1-217ENST00000556203 MFAP2P55001 183 aa11.6□□□□□ -0.55
ACTN1-217ENST00000556203 SPINK9Q5DT21 86 aa11.6□□□□□ -0.55
ACTN1-217ENST00000556203 ZNF57Q68EA5 555 aaPredicted RBP11.6□□□□□ -0.55
ACTN1-217ENST00000556203 IL34Q6ZMJ4 242 aa11.6□□□□□ -0.55
ACTN1-217ENST00000556203 SELENOHQ8IZQ5 122 aaKnown RBP11.6□□□□□ -0.55
ACTN1-217ENST00000556203 OR2C3Q8N628 320 aa11.6□□□□□ -0.55
ACTN1-217ENST00000556203 ZNF502Q8TBZ5 544 aa11.6□□□□□ -0.55
ACTN1-217ENST00000556203 DEDD2Q8WXF8 326 aa11.6□□□□□ -0.55
ACTN1-217ENST00000556203 RBPMSQ93062 196 aaKnown RBP11.6□□□□□ -0.55
ACTN1-217ENST00000556203 PLEKHA3Q9HB20 300 aa11.6□□□□□ -0.55
ACTN1-217ENST00000556203 ST8SIA3O43173 380 aa11.59□□□□□ -0.55
ACTN1-217ENST00000556203 OR2C1O95371 312 aa11.59□□□□□ -0.55
ACTN1-217ENST00000556203 IFNA17P01571 189 aa11.59□□□□□ -0.55
ACTN1-217ENST00000556203 CLEC3BP05452 202 aa11.59□□□□□ -0.55
ACTN1-217ENST00000556203 SPNP16150 400 aa11.59□□□□□ -0.55
ACTN1-217ENST00000556203 INPP1P49441 399 aa11.59□□□□□ -0.55
ACTN1-217ENST00000556203 BAK1Q16611 211 aa11.59□□□□□ -0.55
ACTN1-217ENST00000556203 TMEM268Q5VZI3 342 aa11.59□□□□□ -0.55
ACTN1-217ENST00000556203 TRIQKQ629K1 86 aa11.59□□□□□ -0.55
ACTN1-217ENST00000556203 TMED4Q7Z7H5 227 aa11.59□□□□□ -0.55
ACTN1-217ENST00000556203 SLC35G3Q8N808 338 aa11.59□□□□□ -0.55
ACTN1-217ENST00000556203 OR1L6Q8NGR2 347 aa11.59□□□□□ -0.55
ACTN1-217ENST00000556203 OR1P1Q8NH06 330 aa11.59□□□□□ -0.55
ACTN1-217ENST00000556203 VN1R17PQ8TDU5 208 aa11.59□□□□□ -0.55
ACTN1-217ENST00000556203 PDCD10Q9BUL8 212 aa11.59□□□□□ -0.55
ACTN1-217ENST00000556203 ZC4H2Q9NQZ6 224 aa11.59□□□□□ -0.55
ACTN1-217ENST00000556203 PRR13Q9NZ81 148 aa11.59□□□□□ -0.55
ACTN1-217ENST00000556203 PEMTQ9UBM1 199 aa11.59□□□□□ -0.55
ACTN1-217ENST00000556203 KCNIP3Q9Y2W7 256 aa11.59□□□□□ -0.55
ACTN1-217ENST00000556203 IGHV3-21A0A0B4J1V1 117 aa11.58□□□□□ -0.56
ACTN1-217ENST00000556203 CSN3P07498 182 aa11.58□□□□□ -0.56
ACTN1-217ENST00000556203 GPR183P32249 361 aa11.58□□□□□ -0.56
ACTN1-217ENST00000556203 ERHP84090 104 aaKnown RBP11.58□□□□□ -0.56
ACTN1-217ENST00000556203 TMEM187Q14656 261 aa11.58□□□□□ -0.56
ACTN1-217ENST00000556203 Q6ZRM9 215 aa11.58□□□□□ -0.56
ACTN1-217ENST00000556203 FAM219AQ8IW50 185 aa11.58□□□□□ -0.56
ACTN1-217ENST00000556203 GALNT14Q96FL9 552 aa11.58□□□□□ -0.56
ACTN1-217ENST00000556203 SDHCQ99643 169 aaPredicted RBP11.58□□□□□ -0.56
ACTN1-217ENST00000556203 TMEM56-RWDD3S4R434 201 aa11.58□□□□□ -0.56
ACTN1-217ENST00000556203 IGLV1-51P01701 117 aa11.57□□□□□ -0.56
ACTN1-217ENST00000556203 SUPT4H1P63272 117 aaKnown RBP11.57□□□□□ -0.56
ACTN1-217ENST00000556203 ZNF114Q8NC26 417 aa11.57□□□□□ -0.56
ACTN1-217ENST00000556203 SCARB1Q8WTV0 552 aa11.57□□□□□ -0.56
ACTN1-217ENST00000556203 GPR146Q96CH1 333 aa11.57□□□□□ -0.56
ACTN1-217ENST00000556203 MISP3Q96FF7 219 aa11.57□□□□□ -0.56
ACTN1-217ENST00000556203 SLC25A21Q9BQT8 299 aaPredicted RBP11.57□□□□□ -0.56
ACTN1-217ENST00000556203 C21orf62Q9NYP8 219 aa11.57□□□□□ -0.56
ACTN1-217ENST00000556203 K7EIM0 57 aa11.56□□□□□ -0.56
ACTN1-217ENST00000556203 ANXA3P12429 323 aa11.56□□□□□ -0.56
ACTN1-217ENST00000556203 GP9P14770 177 aa11.56□□□□□ -0.56
ACTN1-217ENST00000556203 HOXA1P49639 335 aaPredicted RBP11.56□□□□□ -0.56
ACTN1-217ENST00000556203 DCTN2Q13561 401 aaKnown RBP11.56□□□□□ -0.56
ACTN1-217ENST00000556203 PLET1Q6UQ28 207 aa11.56□□□□□ -0.56
ACTN1-217ENST00000556203 GPHB5Q86YW7 130 aa11.56□□□□□ -0.56
ACTN1-217ENST00000556203 IL22RA2Q969J5 263 aa11.56□□□□□ -0.56
ACTN1-217ENST00000556203 ENY2Q9NPA8 101 aa11.56□□□□□ -0.56
ACTN1-217ENST00000556203 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.56□□□□□ -0.56
ACTN1-217ENST00000556203 SIGLEC8Q9NYZ4 499 aa11.56□□□□□ -0.56
ACTN1-217ENST00000556203 CACNG5Q9UF02 275 aa11.56□□□□□ -0.56
ACTN1-217ENST00000556203 LINC00854A0A1B0GVQ3 168 aa11.55□□□□□ -0.56
ACTN1-217ENST00000556203 ZNF320A2RRD8 509 aa11.55□□□□□ -0.56
ACTN1-217ENST00000556203 OR2T8A6NH00 312 aa11.55□□□□□ -0.56
ACTN1-217ENST00000556203 INS-IGF2F8WCM5 200 aa11.55□□□□□ -0.56
ACTN1-217ENST00000556203 LGALS9O00182 355 aa11.55□□□□□ -0.56
ACTN1-217ENST00000556203 FAM106AQ4KMX7 169 aa11.55□□□□□ -0.56
ACTN1-217ENST00000556203 LGI3Q8N145 548 aa11.55□□□□□ -0.56
ACTN1-217ENST00000556203 UBAC2Q8NBM4 344 aa11.55□□□□□ -0.56
ACTN1-217ENST00000556203 LSM4Q9Y4Z0 139 aaKnown RBP11.55□□□□□ -0.56
ACTN1-217ENST00000556203 IGHV3-35A0A0C4DH35 117 aa11.54□□□□□ -0.56
ACTN1-217ENST00000556203 NAP1L6A6NFF2 107 aa11.54□□□□□ -0.56
ACTN1-217ENST00000556203 C2orf70A6NJV1 201 aa11.54□□□□□ -0.56
ACTN1-217ENST00000556203 I3L2K1 104 aa11.54□□□□□ -0.56
ACTN1-217ENST00000556203 TGOLN2O43493 480 aa11.54□□□□□ -0.56
ACTN1-217ENST00000556203 MT-CO2P00403 227 aa11.54□□□□□ -0.56
ACTN1-217ENST00000556203 IL7P13232 177 aa11.54□□□□□ -0.56
ACTN1-217ENST00000556203 EDN2P20800 178 aa11.54□□□□□ -0.56
ACTN1-217ENST00000556203 VAMP1P23763 118 aa11.54□□□□□ -0.56
ACTN1-217ENST00000556203 SNCAP37840 140 aa11.54□□□□□ -0.56
ACTN1-217ENST00000556203 CCR6P51684 374 aa11.54□□□□□ -0.56
ACTN1-217ENST00000556203 SPCS3P61009 180 aa11.54□□□□□ -0.56
ACTN1-217ENST00000556203 SRPXP78539 464 aa11.54□□□□□ -0.56
ACTN1-217ENST00000556203 RBMS2Q15434 407 aaKnown RBP11.54□□□□□ -0.56
ACTN1-217ENST00000556203 AARDQ4LEZ3 155 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms