RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 C8orf88P0DMB2 117 aa6.97□□□□□ -1.29
VIPAS39-207ENST00000555854 ETV6P41212 452 aa6.97□□□□□ -1.29
VIPAS39-207ENST00000555854 TRIM16LQ309B1 348 aa6.97□□□□□ -1.29
VIPAS39-207ENST00000555854 PHLDA2Q53GA4 152 aa6.97□□□□□ -1.29
VIPAS39-207ENST00000555854 TM4SF20Q53R12 229 aa6.97□□□□□ -1.29
VIPAS39-207ENST00000555854 ZFAND6Q6FIF0 208 aa6.97□□□□□ -1.29
VIPAS39-207ENST00000555854 CD300LFQ8TDQ1 290 aa6.97□□□□□ -1.29
VIPAS39-207ENST00000555854 TMEM190Q8WZ59 177 aa6.97□□□□□ -1.29
VIPAS39-207ENST00000555854 ZNF436Q9C0F3 470 aaPredicted RBP6.97□□□□□ -1.29
VIPAS39-207ENST00000555854 COMMD5Q9GZQ3 224 aa6.97□□□□□ -1.29
VIPAS39-207ENST00000555854 SRD5A3Q9H8P0 318 aa6.97□□□□□ -1.29
VIPAS39-207ENST00000555854 SCPEP1Q9HB40 452 aa6.97□□□□□ -1.29
VIPAS39-207ENST00000555854 TRBV7-1A0A0A6YYK4 115 aa6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 C15orf61A6NNL5 157 aa6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 M0QYG6 137 aa6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 TGOLN2O43493 480 aa6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 DHFRP00374 187 aa6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 KRASP01116 189 aa6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 SERPINE2P07093 398 aa6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 TRAPPC2P0DI81 140 aa6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 TRAPPC2BP0DI82 140 aa6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 OR13C7P0DN81 318 aa6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 DEFA4P12838 97 aa6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 PTBP1P26599 531 aaKnown RBP eCLIP6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 RCVRNP35243 200 aa6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 ADMP35318 185 aa6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 DEFA1P59665 94 aa6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 DEFA3P59666 94 aa6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 RNASE12Q5GAN4 147 aaKnown RBP6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 TBC1D26Q86UD7 250 aa6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 LHFPL1Q86WI0 220 aa6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 CADM3Q8N126 398 aa6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 UXS1Q8NBZ7 420 aa6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 OR1L8Q8NGR8 309 aa6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 LSM10Q969L4 123 aaKnown RBP6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 SEC22AQ96IW7 307 aa6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 CXorf58Q96LI9 332 aa6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 CMTM3Q96MX0 182 aa6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 CHRDL1Q9BU40 450 aa6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 SLIRPQ9GZT3 109 aaKnown RBP6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 TMEM14BQ9NUH8 114 aa6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 TECRQ9NZ01 308 aaKnown RBP6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 F11RQ9Y624 299 aaKnown RBP6.96□□□□□ -1.3
VIPAS39-207ENST00000555854 A0A1B0GVG6 124 aa6.95□□□□□ -1.3
VIPAS39-207ENST00000555854 ZNF320A2RRD8 509 aa6.95□□□□□ -1.3
VIPAS39-207ENST00000555854 OR2T8A6NH00 312 aa6.95□□□□□ -1.3
VIPAS39-207ENST00000555854 TPPPO94811 219 aa6.95□□□□□ -1.3
VIPAS39-207ENST00000555854 SCAF4O95104 1147 aaKnown RBP6.95□□□□□ -1.3
VIPAS39-207ENST00000555854 P0C879 139 aa6.95□□□□□ -1.3
VIPAS39-207ENST00000555854 LYL1P12980 280 aa6.95□□□□□ -1.3
VIPAS39-207ENST00000555854 UCP3P55916 312 aa6.95□□□□□ -1.3
VIPAS39-207ENST00000555854 ERVK-16P61578 105 aa6.95□□□□□ -1.3
VIPAS39-207ENST00000555854 OXA1LQ15070 435 aa6.95□□□□□ -1.3
VIPAS39-207ENST00000555854 GUCA2BQ16661 112 aa6.95□□□□□ -1.3
VIPAS39-207ENST00000555854 IZUMO4Q1ZYL8 232 aa6.95□□□□□ -1.3
VIPAS39-207ENST00000555854 SPANXN2Q5MJ10 180 aa6.95□□□□□ -1.3
VIPAS39-207ENST00000555854 ZNF57Q68EA5 555 aaPredicted RBP6.95□□□□□ -1.3
VIPAS39-207ENST00000555854 THOC7Q6I9Y2 204 aaKnown RBP6.95□□□□□ -1.3
VIPAS39-207ENST00000555854 OR4D10Q8NGI6 311 aa6.95□□□□□ -1.3
VIPAS39-207ENST00000555854 OR6F1Q8NGZ6 308 aa6.95□□□□□ -1.3
VIPAS39-207ENST00000555854 VN1R17PQ8TDU5 208 aa6.95□□□□□ -1.3
VIPAS39-207ENST00000555854 MRGPRFQ96AM1 343 aa6.95□□□□□ -1.3
VIPAS39-207ENST00000555854 AIFM2Q9BRQ8 373 aa6.95□□□□□ -1.3
VIPAS39-207ENST00000555854 CCDC32Q9BV29 185 aa6.95□□□□□ -1.3
VIPAS39-207ENST00000555854 MIXL1Q9H2W2 232 aa6.95□□□□□ -1.3
VIPAS39-207ENST00000555854 TUBA4BQ9H853 241 aa6.95□□□□□ -1.3
VIPAS39-207ENST00000555854 FAM212BQ9NTI7 297 aaPredicted RBP6.95□□□□□ -1.3
VIPAS39-207ENST00000555854 SLC2A8Q9NY64 477 aa6.95□□□□□ -1.3
VIPAS39-207ENST00000555854 KLK11Q9UBX7 282 aa6.95□□□□□ -1.3
VIPAS39-207ENST00000555854 OR51B2Q9Y5P1 312 aa6.95□□□□□ -1.3
VIPAS39-207ENST00000555854 IGHV3OR16-8A0A075B7F1 116 aa6.94□□□□□ -1.3
VIPAS39-207ENST00000555854 LCE6AA0A183 80 aa6.94□□□□□ -1.3
VIPAS39-207ENST00000555854 OR11H12B2RN74 326 aa6.94□□□□□ -1.3
VIPAS39-207ENST00000555854 IGKV1-5P01602 117 aa6.94□□□□□ -1.3
VIPAS39-207ENST00000555854 PI3P19957 117 aa6.94□□□□□ -1.3
VIPAS39-207ENST00000555854 RORCP51449 518 aa6.94□□□□□ -1.3
VIPAS39-207ENST00000555854 BCAP31P51572 246 aa6.94□□□□□ -1.3
VIPAS39-207ENST00000555854 FAM106AQ4KMX7 169 aa6.94□□□□□ -1.3
VIPAS39-207ENST00000555854 HSD17B13Q7Z5P4 300 aaPredicted RBP6.94□□□□□ -1.3
VIPAS39-207ENST00000555854 CMTM1Q8IZ96 169 aa6.94□□□□□ -1.3
VIPAS39-207ENST00000555854 CENPSQ8N2Z9 138 aa6.94□□□□□ -1.3
VIPAS39-207ENST00000555854 OR5B3Q8NH48 314 aa6.94□□□□□ -1.3
VIPAS39-207ENST00000555854 OR52I2Q8NH67 350 aa6.94□□□□□ -1.3
VIPAS39-207ENST00000555854 SCARB1Q8WTV0 552 aa6.94□□□□□ -1.3
VIPAS39-207ENST00000555854 AP3S1Q92572 193 aa6.94□□□□□ -1.3
VIPAS39-207ENST00000555854 ABHD1Q96SE0 405 aa6.94□□□□□ -1.3
VIPAS39-207ENST00000555854 HINT2Q9BX68 163 aa6.94□□□□□ -1.3
VIPAS39-207ENST00000555854 A0A0G2JRQ6 117 aa6.93□□□□□ -1.3
VIPAS39-207ENST00000555854 I3L2K1 104 aa6.93□□□□□ -1.3
VIPAS39-207ENST00000555854 UPK1BO75841 260 aa6.93□□□□□ -1.3
VIPAS39-207ENST00000555854 PTTG1O95997 202 aa6.93□□□□□ -1.3
VIPAS39-207ENST00000555854 CD3DP04234 171 aa6.93□□□□□ -1.3
VIPAS39-207ENST00000555854 HNRNPCP07910 306 aaKnown RBP eCLIP6.93□□□□□ -1.3
VIPAS39-207ENST00000555854 ELLP55199 621 aaPredicted RBP6.93□□□□□ -1.3
VIPAS39-207ENST00000555854 RND3P61587 244 aa6.93□□□□□ -1.3
VIPAS39-207ENST00000555854 TSPAN5P62079 268 aa6.93□□□□□ -1.3
VIPAS39-207ENST00000555854 PRCDQ00LT1 54 aa6.93□□□□□ -1.3
VIPAS39-207ENST00000555854 ODF3L2Q3SX64 289 aa6.93□□□□□ -1.3
VIPAS39-207ENST00000555854 SLC25A24Q6NUK1 477 aa6.93□□□□□ -1.3
VIPAS39-207ENST00000555854 PLET1Q6UQ28 207 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms