RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 TRBV7-1A0A0A6YYK4 115 aa10.45□□□□□ -0.74
SHMT2-219ENST00000555563 A0A0B4J293 547 aa10.45□□□□□ -0.74
SHMT2-219ENST00000555563 CYB5BO43169 146 aa10.45□□□□□ -0.74
SHMT2-219ENST00000555563 GGCTO75223 188 aaKnown RBP10.45□□□□□ -0.74
SHMT2-219ENST00000555563 ATG12O94817 140 aa10.45□□□□□ -0.74
SHMT2-219ENST00000555563 OR2C1O95371 312 aa10.45□□□□□ -0.74
SHMT2-219ENST00000555563 IGLV1-51P01701 117 aa10.45□□□□□ -0.74
SHMT2-219ENST00000555563 CSN3P07498 182 aa10.45□□□□□ -0.74
SHMT2-219ENST00000555563 GPR183P32249 361 aa10.45□□□□□ -0.74
SHMT2-219ENST00000555563 FAUP35544 74 aaKnown RBP10.45□□□□□ -0.74
SHMT2-219ENST00000555563 ETV6P41212 452 aa10.45□□□□□ -0.74
SHMT2-219ENST00000555563 AP3S2P59780 193 aa10.45□□□□□ -0.74
SHMT2-219ENST00000555563 SPINK9Q5DT21 86 aa10.45□□□□□ -0.74
SHMT2-219ENST00000555563 SPANXN2Q5MJ10 180 aa10.45□□□□□ -0.74
SHMT2-219ENST00000555563 SLC25A24Q6NUK1 477 aa10.45□□□□□ -0.74
SHMT2-219ENST00000555563 TOMM5Q8N4H5 51 aa10.45□□□□□ -0.74
SHMT2-219ENST00000555563 OR2C3Q8N628 320 aa10.45□□□□□ -0.74
SHMT2-219ENST00000555563 GLYATL2Q8WU03 294 aa10.45□□□□□ -0.74
SHMT2-219ENST00000555563 TMEM230Q96A57 120 aa10.45□□□□□ -0.74
SHMT2-219ENST00000555563 SRRQ9GZT4 340 aa10.45□□□□□ -0.74
SHMT2-219ENST00000555563 PLEKHA3Q9HB20 300 aa10.45□□□□□ -0.74
SHMT2-219ENST00000555563 ZC4H2Q9NQZ6 224 aa10.45□□□□□ -0.74
SHMT2-219ENST00000555563 PEMTQ9UBM1 199 aa10.45□□□□□ -0.74
SHMT2-219ENST00000555563 LSM4Q9Y4Z0 139 aaKnown RBP10.45□□□□□ -0.74
SHMT2-219ENST00000555563 ST8SIA3O43173 380 aa10.44□□□□□ -0.74
SHMT2-219ENST00000555563 CDS2O95674 445 aa10.44□□□□□ -0.74
SHMT2-219ENST00000555563 GP9P14770 177 aa10.44□□□□□ -0.74
SHMT2-219ENST00000555563 HSPE1P61604 102 aaKnown RBP10.44□□□□□ -0.74
SHMT2-219ENST00000555563 RNASE11Q8TAA1 199 aaKnown RBP10.44□□□□□ -0.74
SHMT2-219ENST00000555563 RBPMSQ93062 196 aaKnown RBP10.44□□□□□ -0.74
SHMT2-219ENST00000555563 RRNAD1Q96FB5 475 aaKnown RBP10.44□□□□□ -0.74
SHMT2-219ENST00000555563 IGHV3-21A0A0B4J1V1 117 aa10.43□□□□□ -0.74
SHMT2-219ENST00000555563 K7EIM0 57 aa10.43□□□□□ -0.74
SHMT2-219ENST00000555563 CLEC3BP05452 202 aa10.43□□□□□ -0.74
SHMT2-219ENST00000555563 EDN2P20800 178 aa10.43□□□□□ -0.74
SHMT2-219ENST00000555563 DHODHQ02127 395 aa10.43□□□□□ -0.74
SHMT2-219ENST00000555563 ADAMTSL5Q6ZMM2 481 aa10.43□□□□□ -0.74
SHMT2-219ENST00000555563 SGPP2Q8IWX5 399 aa10.43□□□□□ -0.74
SHMT2-219ENST00000555563 SLC35G3Q8N808 338 aa10.43□□□□□ -0.74
SHMT2-219ENST00000555563 ZNF114Q8NC26 417 aa10.43□□□□□ -0.74
SHMT2-219ENST00000555563 OR1P1Q8NH06 330 aa10.43□□□□□ -0.74
SHMT2-219ENST00000555563 VN1R17PQ8TDU5 208 aa10.43□□□□□ -0.74
SHMT2-219ENST00000555563 SCGB3A2Q96PL1 93 aa10.43□□□□□ -0.74
SHMT2-219ENST00000555563 SIGLEC8Q9NYZ4 499 aa10.43□□□□□ -0.74
SHMT2-219ENST00000555563 PRR13Q9NZ81 148 aa10.43□□□□□ -0.74
SHMT2-219ENST00000555563 NDUFA13Q9P0J0 144 aa10.43□□□□□ -0.74
SHMT2-219ENST00000555563 LGALS9O00182 355 aa10.42□□□□□ -0.74
SHMT2-219ENST00000555563 CD69Q07108 199 aa10.42□□□□□ -0.74
SHMT2-219ENST00000555563 TMEM268Q5VZI3 342 aa10.42□□□□□ -0.74
SHMT2-219ENST00000555563 Q6ZRM9 215 aa10.42□□□□□ -0.74
SHMT2-219ENST00000555563 GPHB5Q86YW7 130 aa10.42□□□□□ -0.74
SHMT2-219ENST00000555563 SELENOHQ8IZQ5 122 aaKnown RBP10.42□□□□□ -0.74
SHMT2-219ENST00000555563 OR1L6Q8NGR2 347 aa10.42□□□□□ -0.74
SHMT2-219ENST00000555563 SCARB1Q8WTV0 552 aa10.42□□□□□ -0.74
SHMT2-219ENST00000555563 GALNT14Q96FL9 552 aa10.42□□□□□ -0.74
SHMT2-219ENST00000555563 B9D2Q9BPU9 175 aa10.42□□□□□ -0.74
SHMT2-219ENST00000555563 IGHV3-35A0A0C4DH35 117 aa10.41□□□□□ -0.74
SHMT2-219ENST00000555563 OR2T8A6NH00 312 aa10.41□□□□□ -0.74
SHMT2-219ENST00000555563 C2orf70A6NJV1 201 aa10.41□□□□□ -0.74
SHMT2-219ENST00000555563 A8MWP6 167 aa10.41□□□□□ -0.74
SHMT2-219ENST00000555563 F8W735 103 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-219ENST00000555563 TGOLN2O43493 480 aa10.41□□□□□ -0.74
SHMT2-219ENST00000555563 IFNA17P01571 189 aa10.41□□□□□ -0.74
SHMT2-219ENST00000555563 AKR1C4P17516 323 aa10.41□□□□□ -0.74
SHMT2-219ENST00000555563 HOXA1P49639 335 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-219ENST00000555563 SUPT4H1P63272 117 aaKnown RBP10.41□□□□□ -0.74
SHMT2-219ENST00000555563 TMEM187Q14656 261 aa10.41□□□□□ -0.74
SHMT2-219ENST00000555563 ZNF57Q68EA5 555 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-219ENST00000555563 UNQ9165/PRO28630Q6UXU0 137 aa10.41□□□□□ -0.74
SHMT2-219ENST00000555563 TMED4Q7Z7H5 227 aa10.41□□□□□ -0.74
SHMT2-219ENST00000555563 FAM219AQ8IW50 185 aa10.41□□□□□ -0.74
SHMT2-219ENST00000555563 DYNLRB2Q8TF09 96 aa10.41□□□□□ -0.74
SHMT2-219ENST00000555563 DEDD2Q8WXF8 326 aa10.41□□□□□ -0.74
SHMT2-219ENST00000555563 MISP3Q96FF7 219 aa10.41□□□□□ -0.74
SHMT2-219ENST00000555563 SDHCQ99643 169 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-219ENST00000555563 PDCD10Q9BUL8 212 aa10.41□□□□□ -0.74
SHMT2-219ENST00000555563 C21orf62Q9NYP8 219 aa10.41□□□□□ -0.74
SHMT2-219ENST00000555563 CACNG5Q9UF02 275 aa10.41□□□□□ -0.74
SHMT2-219ENST00000555563 TMEM56-RWDD3S4R434 201 aa10.41□□□□□ -0.74
SHMT2-219ENST00000555563 ZNF320A2RRD8 509 aa10.4□□□□□ -0.74
SHMT2-219ENST00000555563 TMEM213A2RRL7 107 aa10.4□□□□□ -0.74
SHMT2-219ENST00000555563 IZUMO1RA6ND01 250 aa10.4□□□□□ -0.74
SHMT2-219ENST00000555563 INS-IGF2F8WCM5 200 aa10.4□□□□□ -0.74
SHMT2-219ENST00000555563 FOLR2P14207 255 aa10.4□□□□□ -0.74
SHMT2-219ENST00000555563 ERHP84090 104 aaKnown RBP10.4□□□□□ -0.74
SHMT2-219ENST00000555563 BAK1Q16611 211 aa10.4□□□□□ -0.74
SHMT2-219ENST00000555563 AARDQ4LEZ3 155 aa10.4□□□□□ -0.74
SHMT2-219ENST00000555563 TRIQKQ629K1 86 aa10.4□□□□□ -0.74
SHMT2-219ENST00000555563 LCN12Q6JVE5 192 aa10.4□□□□□ -0.74
SHMT2-219ENST00000555563 PLET1Q6UQ28 207 aa10.4□□□□□ -0.74
SHMT2-219ENST00000555563 UBAC2Q8NBM4 344 aa10.4□□□□□ -0.74
SHMT2-219ENST00000555563 CACNG8Q8WXS5 425 aa10.4□□□□□ -0.74
SHMT2-219ENST00000555563 IL22RA2Q969J5 263 aa10.4□□□□□ -0.74
SHMT2-219ENST00000555563 KCNIP3Q9Y2W7 256 aa10.4□□□□□ -0.74
SHMT2-219ENST00000555563 SMAD5-AS1Q9Y6J3 95 aa10.4□□□□□ -0.74
SHMT2-219ENST00000555563 SORL1Q92673 2214 aa10.39□□□□□ -0.75
SHMT2-219ENST00000555563 I3L2K1 104 aa10.39□□□□□ -0.75
SHMT2-219ENST00000555563 CD300EQ496F6 205 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-219ENST00000555563 FAM106AQ4KMX7 169 aa10.39□□□□□ -0.75
SHMT2-219ENST00000555563 Q56UQ5 140 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms