RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 TNFRSF9Q07011 255 aa7.91□□□□□ -1.14
PSEN1-213ENST00000555386 HES1Q14469 280 aa7.91□□□□□ -1.14
PSEN1-213ENST00000555386 HNF4GQ14541 408 aa7.91□□□□□ -1.14
PSEN1-213ENST00000555386 ATP6V1FQ16864 119 aa7.91□□□□□ -1.14
PSEN1-213ENST00000555386 TMEM30BQ3MIR4 351 aa7.91□□□□□ -1.14
PSEN1-213ENST00000555386 ZNF506Q5JVG8 444 aa7.91□□□□□ -1.14
PSEN1-213ENST00000555386 SLC25A24Q6NUK1 477 aa7.91□□□□□ -1.14
PSEN1-213ENST00000555386 SLC25A48Q6ZT89 311 aaKnown RBP7.91□□□□□ -1.14
PSEN1-213ENST00000555386 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.91□□□□□ -1.14
PSEN1-213ENST00000555386 ZNF439Q8NDP4 499 aa7.91□□□□□ -1.14
PSEN1-213ENST00000555386 OR10G4Q8NGN3 311 aa7.91□□□□□ -1.14
PSEN1-213ENST00000555386 PINX1Q96BK5 328 aaKnown RBP7.91□□□□□ -1.14
PSEN1-213ENST00000555386 CIB3Q96Q77 187 aaPredicted RBP7.91□□□□□ -1.14
PSEN1-213ENST00000555386 YPEL2Q96QA6 119 aa7.91□□□□□ -1.14
PSEN1-213ENST00000555386 MEGF9Q9H1U4 602 aa7.91□□□□□ -1.14
PSEN1-213ENST00000555386 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.91□□□□□ -1.14
PSEN1-213ENST00000555386 MLXQ9UH92 298 aa7.91□□□□□ -1.14
PSEN1-213ENST00000555386 TIMM9Q9Y5J7 89 aa7.91□□□□□ -1.14
PSEN1-213ENST00000555386 ITGB1BP1O14713 200 aa7.9□□□□□ -1.14
PSEN1-213ENST00000555386 NXPH3O95157 252 aa7.9□□□□□ -1.14
PSEN1-213ENST00000555386 HSPB1P04792 205 aaKnown RBP7.9□□□□□ -1.14
PSEN1-213ENST00000555386 CRYBA1P05813 215 aa7.9□□□□□ -1.14
PSEN1-213ENST00000555386 TMEM267Q0VDI3 215 aaPredicted RBP7.9□□□□□ -1.14
PSEN1-213ENST00000555386 RNF212Q495C1 297 aa7.9□□□□□ -1.14
PSEN1-213ENST00000555386 FBLN7Q53RD9 439 aa7.9□□□□□ -1.14
PSEN1-213ENST00000555386 KHDC3LQ587J8 217 aa7.9□□□□□ -1.14
PSEN1-213ENST00000555386 RPL39P5Q59GN2 51 aa7.9□□□□□ -1.14
PSEN1-213ENST00000555386 SOHLH1Q5JUK2 328 aa7.9□□□□□ -1.14
PSEN1-213ENST00000555386 TMEM14EPQ6UXP3 125 aa7.9□□□□□ -1.14
PSEN1-213ENST00000555386 THNSL2Q86YJ6 484 aa7.9□□□□□ -1.14
PSEN1-213ENST00000555386 TGIF2LXQ8IUE1 241 aa7.9□□□□□ -1.14
PSEN1-213ENST00000555386 PRDM13Q9H4Q3 707 aa7.9□□□□□ -1.14
PSEN1-213ENST00000555386 VPREB3Q9UKI3 123 aa7.9□□□□□ -1.14
PSEN1-213ENST00000555386 FBXO7Q9Y3I1 522 aa7.9□□□□□ -1.14
PSEN1-213ENST00000555386 SAA2-SAA4A0A096LPE2 208 aa7.89□□□□□ -1.15
PSEN1-213ENST00000555386 C7orf77A4D0Y5 90 aa7.89□□□□□ -1.15
PSEN1-213ENST00000555386 COLCA2A8K830 154 aa7.89□□□□□ -1.15
PSEN1-213ENST00000555386 TSPAN9O75954 239 aa7.89□□□□□ -1.15
PSEN1-213ENST00000555386 RNASE1P07998 156 aaKnown RBP7.89□□□□□ -1.15
PSEN1-213ENST00000555386 SAA2P0DJI9 122 aaPredicted RBP7.89□□□□□ -1.15
PSEN1-213ENST00000555386 IAPPP10997 89 aa7.89□□□□□ -1.15
PSEN1-213ENST00000555386 BRS3P32247 399 aa7.89□□□□□ -1.15
PSEN1-213ENST00000555386 GPR12P47775 334 aa7.89□□□□□ -1.15
PSEN1-213ENST00000555386 RUNX1Q01196 453 aa7.89□□□□□ -1.15
PSEN1-213ENST00000555386 PMS2P11Q13670 270 aa7.89□□□□□ -1.15
PSEN1-213ENST00000555386 AWAT1Q58HT5 328 aa7.89□□□□□ -1.15
PSEN1-213ENST00000555386 CCDC144NLQ6NUI1 221 aa7.89□□□□□ -1.15
PSEN1-213ENST00000555386 CENPVQ7Z7K6 275 aaPredicted RBP7.89□□□□□ -1.15
PSEN1-213ENST00000555386 LILRB2Q8N423 598 aa7.89□□□□□ -1.15
PSEN1-213ENST00000555386 LINC00311Q8N616 119 aa7.89□□□□□ -1.15
PSEN1-213ENST00000555386 OR5R1Q8NH85 324 aa7.89□□□□□ -1.15
PSEN1-213ENST00000555386 PIFOQ8TCI5 191 aa7.89□□□□□ -1.15
PSEN1-213ENST00000555386 TCTEX1D2Q8WW35 142 aa7.89□□□□□ -1.15
PSEN1-213ENST00000555386 MBD3L1Q8WWY6 194 aa7.89□□□□□ -1.15
PSEN1-213ENST00000555386 TMEM158Q8WZ71 300 aa7.89□□□□□ -1.15
PSEN1-213ENST00000555386 C5orf30Q96GV9 206 aa7.89□□□□□ -1.15
PSEN1-213ENST00000555386 MDFIQ99750 246 aa7.89□□□□□ -1.15
PSEN1-213ENST00000555386 AGMATQ9BSE5 352 aa7.89□□□□□ -1.15
PSEN1-213ENST00000555386 C19orf24Q9BVV8 132 aa7.89□□□□□ -1.15
PSEN1-213ENST00000555386 MRPL20Q9BYC9 149 aaKnown RBP7.89□□□□□ -1.15
PSEN1-213ENST00000555386 IFI27L2Q9H2X8 130 aa7.89□□□□□ -1.15
PSEN1-213ENST00000555386 RBKSQ9H477 322 aa7.89□□□□□ -1.15
PSEN1-213ENST00000555386 RPS10P5Q9NQ39 176 aa7.89□□□□□ -1.15
PSEN1-213ENST00000555386 GAB2Q9UQC2 676 aa7.89□□□□□ -1.15
PSEN1-213ENST00000555386 IGHV1-3A0A0C4DH29 117 aa7.88□□□□□ -1.15
PSEN1-213ENST00000555386 A0A1W2PPI3 338 aa7.88□□□□□ -1.15
PSEN1-213ENST00000555386 H3BP45 60 aa7.88□□□□□ -1.15
PSEN1-213ENST00000555386 RBFOX2O43251 390 aaKnown RBP eCLIP7.88□□□□□ -1.15
PSEN1-213ENST00000555386 RAMP3O60896 148 aa7.88□□□□□ -1.15
PSEN1-213ENST00000555386 NDUFS6O75380 124 aaKnown RBP7.88□□□□□ -1.15
PSEN1-213ENST00000555386 IGKV1D-33P01593 117 aa7.88□□□□□ -1.15
PSEN1-213ENST00000555386 IGKV1-33P01594 117 aa7.88□□□□□ -1.15
PSEN1-213ENST00000555386 MT-ND4LP03901 98 aa7.88□□□□□ -1.15
PSEN1-213ENST00000555386 SNRNP70P08621 437 aaKnown RBP7.88□□□□□ -1.15
PSEN1-213ENST00000555386 SRP19P09132 144 aaKnown RBP7.88□□□□□ -1.15
PSEN1-213ENST00000555386 METTL15P1P0C7V9 234 aa7.88□□□□□ -1.15
PSEN1-213ENST00000555386 KIR2DS2P43631 304 aa7.88□□□□□ -1.15
PSEN1-213ENST00000555386 RAB7AP51149 207 aa7.88□□□□□ -1.15
PSEN1-213ENST00000555386 RPL30P62888 115 aaKnown RBP7.88□□□□□ -1.15
PSEN1-213ENST00000555386 IZUMO4Q1ZYL8 232 aa7.88□□□□□ -1.15
PSEN1-213ENST00000555386 Q3ZCU0 254 aa7.88□□□□□ -1.15
PSEN1-213ENST00000555386 AARDQ4LEZ3 155 aa7.88□□□□□ -1.15
PSEN1-213ENST00000555386 H2BFWTQ7Z2G1 175 aa7.88□□□□□ -1.15
PSEN1-213ENST00000555386 HAPLN4Q86UW8 402 aa7.88□□□□□ -1.15
PSEN1-213ENST00000555386 TMEM86BQ8N661 226 aa7.88□□□□□ -1.15
PSEN1-213ENST00000555386 C8orf31Q8N9H6 132 aa7.88□□□□□ -1.15
PSEN1-213ENST00000555386 RXFP4Q8TDU9 374 aa7.88□□□□□ -1.15
PSEN1-213ENST00000555386 SFT2D1Q8WV19 159 aa7.88□□□□□ -1.15
PSEN1-213ENST00000555386 WDR61Q9GZS3 305 aaKnown RBP7.88□□□□□ -1.15
PSEN1-213ENST00000555386 PLXNB1O43157 2135 aa7.88□□□□□ -1.15
PSEN1-213ENST00000555386 SH2D7A6NKC9 451 aaPredicted RBP7.87□□□□□ -1.15
PSEN1-213ENST00000555386 CLDN34H7C241 214 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 M0R036 132 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 M0R1X1 148 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 SOX15O60248 233 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 S1PR2O95136 353 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 HPRT1P00492 218 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 KRASP01116 189 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 MBP02144 154 aa7.87□□□□□ -1.15
PSEN1-213ENST00000555386 TMEM11P17152 192 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms