RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 P2RX4Q99571 388 aa8.22□□□□□ -1.09
TMEM260-206ENST00000555046 PLEKHA3Q9HB20 300 aa8.22□□□□□ -1.09
TMEM260-206ENST00000555046 PEF1Q9UBV8 284 aaKnown RBP8.22□□□□□ -1.09
TMEM260-206ENST00000555046 FBXL7Q9UJT9 491 aa8.22□□□□□ -1.09
TMEM260-206ENST00000555046 KLK9Q9UKQ9 250 aa8.22□□□□□ -1.09
TMEM260-206ENST00000555046 TMED3Q9Y3Q3 217 aa8.22□□□□□ -1.09
TMEM260-206ENST00000555046 NOTCH3Q9UM47 2321 aa8.21□□□□□ -1.09
TMEM260-206ENST00000555046 COL7A1Q02388 2944 aa8.21□□□□□ -1.09
TMEM260-206ENST00000555046 TRBV7-1A0A0A6YYK4 115 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 A0A1B0GU03 582 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 IGLC7A0M8Q6 106 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 E7EUB6 86 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 INS-IGF2F8WCM5 200 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 PLA2G10O15496 165 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 UPK1BO75841 260 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 IFNA21P01568 189 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 TCRBP04435 133 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 P0C879 139 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 SULT1A3P0DMM9 295 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 SULT1A4P0DMN0 295 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 AREGP15514 252 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 SPCS3P61009 180 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 ASAH1Q13510 395 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 C15orf32Q32M92 178 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 C4orf46Q504U0 113 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 SLC25A24Q6NUK1 477 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 ZNF343Q6P1L6 599 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 SLC35G3Q8N808 338 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 LRTM2Q8N967 370 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 OR1P1Q8NH06 330 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 EEF1AKMT3Q96AZ1 226 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 RAX2Q96IS3 184 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 ATP6V0BQ99437 205 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 HIPK2Q9H2X6 1198 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 GNB4Q9HAV0 340 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 GAR1Q9NY12 217 aaKnown RBP8.21□□□□□ -1.1
TMEM260-206ENST00000555046 SACSQ9NZJ4 4579 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 TNCP24821 2201 aa8.21□□□□□ -1.1
TMEM260-206ENST00000555046 OR2J3O76001 311 aa8.2□□□□□ -1.1
TMEM260-206ENST00000555046 LY86O95711 162 aa8.2□□□□□ -1.1
TMEM260-206ENST00000555046 IGHV3-11P01762 117 aa8.2□□□□□ -1.1
TMEM260-206ENST00000555046 HLA-AP01891 365 aaKnown RBP8.2□□□□□ -1.1
TMEM260-206ENST00000555046 OR4E1P0C645 316 aa8.2□□□□□ -1.1
TMEM260-206ENST00000555046 SLC25A6P12236 298 aa8.2□□□□□ -1.1
TMEM260-206ENST00000555046 INSL3P51460 131 aa8.2□□□□□ -1.1
TMEM260-206ENST00000555046 ATP5IP56385 69 aaPredicted RBP8.2□□□□□ -1.1
TMEM260-206ENST00000555046 SUPT4H1P63272 117 aaKnown RBP8.2□□□□□ -1.1
TMEM260-206ENST00000555046 SMCO1Q147U7 214 aa8.2□□□□□ -1.1
TMEM260-206ENST00000555046 AARDQ4LEZ3 155 aa8.2□□□□□ -1.1
TMEM260-206ENST00000555046 C18orf65Q6ZTR6 163 aa8.2□□□□□ -1.1
TMEM260-206ENST00000555046 OR2C3Q8N628 320 aa8.2□□□□□ -1.1
TMEM260-206ENST00000555046 LINC00482Q8N8I6 264 aa8.2□□□□□ -1.1
TMEM260-206ENST00000555046 OR10W1Q8NGF6 305 aa8.2□□□□□ -1.1
TMEM260-206ENST00000555046 VN1R17PQ8TDU5 208 aa8.2□□□□□ -1.1
TMEM260-206ENST00000555046 CASTOR1Q8WTX7 329 aa8.2□□□□□ -1.1
TMEM260-206ENST00000555046 GPR146Q96CH1 333 aa8.2□□□□□ -1.1
TMEM260-206ENST00000555046 OR5B12Q96R08 314 aa8.2□□□□□ -1.1
TMEM260-206ENST00000555046 F11RQ9Y624 299 aaKnown RBP8.2□□□□□ -1.1
TMEM260-206ENST00000555046 TET2Q6N021 2002 aaPredicted RBP8.2□□□□□ -1.1
TMEM260-206ENST00000555046 HERC2O95714 4834 aa8.2□□□□□ -1.1
TMEM260-206ENST00000555046 PLXNB1O43157 2135 aa8.2□□□□□ -1.1
TMEM260-206ENST00000555046 IGLV11-55A0A075B6I3 123 aa8.19□□□□□ -1.1
TMEM260-206ENST00000555046 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.19□□□□□ -1.1
TMEM260-206ENST00000555046 A0A1B0GW64 132 aa8.19□□□□□ -1.1
TMEM260-206ENST00000555046 C9orf170A2RU37 121 aa8.19□□□□□ -1.1
TMEM260-206ENST00000555046 CGB1A6NKQ9 187 aa8.19□□□□□ -1.1
TMEM260-206ENST00000555046 CORTO00230 105 aa8.19□□□□□ -1.1
TMEM260-206ENST00000555046 ST8SIA3O43173 380 aa8.19□□□□□ -1.1
TMEM260-206ENST00000555046 MED6O75586 246 aa8.19□□□□□ -1.1
TMEM260-206ENST00000555046 PRH1P02810 166 aa8.19□□□□□ -1.1
TMEM260-206ENST00000555046 REG1AP05451 166 aa8.19□□□□□ -1.1
TMEM260-206ENST00000555046 MYOD1P15172 320 aa8.19□□□□□ -1.1
TMEM260-206ENST00000555046 HOXA1P49639 335 aaPredicted RBP8.19□□□□□ -1.1
TMEM260-206ENST00000555046 WT1-ASQ06250 92 aa8.19□□□□□ -1.1
TMEM260-206ENST00000555046 PPP1R1AQ13522 171 aa8.19□□□□□ -1.1
TMEM260-206ENST00000555046 FHL3Q13643 280 aa8.19□□□□□ -1.1
TMEM260-206ENST00000555046 LYZL2Q7Z4W2 148 aa8.19□□□□□ -1.1
TMEM260-206ENST00000555046 LYG2Q86SG7 212 aa8.19□□□□□ -1.1
TMEM260-206ENST00000555046 ENKURQ8TC29 256 aa8.19□□□□□ -1.1
TMEM260-206ENST00000555046 FANCD2OSQ96PS1 177 aa8.19□□□□□ -1.1
TMEM260-206ENST00000555046 ELOVL1Q9BW60 279 aa8.19□□□□□ -1.1
TMEM260-206ENST00000555046 CACNG5Q9UF02 275 aa8.19□□□□□ -1.1
TMEM260-206ENST00000555046 ANKRD34BA5PLL1 514 aa8.18□□□□□ -1.1
TMEM260-206ENST00000555046 CEBPZOSA8MTT3 80 aa8.18□□□□□ -1.1
TMEM260-206ENST00000555046 SCGB2A1O75556 95 aa8.18□□□□□ -1.1
TMEM260-206ENST00000555046 H2AFB2P0C5Z0 115 aa8.18□□□□□ -1.1
TMEM260-206ENST00000555046 BTCP35070 178 aa8.18□□□□□ -1.1
TMEM260-206ENST00000555046 HTR2BP41595 481 aa8.18□□□□□ -1.1
TMEM260-206ENST00000555046 RPP30P78346 268 aaKnown RBP8.18□□□□□ -1.1
TMEM260-206ENST00000555046 IZUMO4Q1ZYL8 232 aa8.18□□□□□ -1.1
TMEM260-206ENST00000555046 RPEL1Q2QD12 228 aa8.18□□□□□ -1.1
TMEM260-206ENST00000555046 DEFB136Q30KP8 78 aa8.18□□□□□ -1.1
TMEM260-206ENST00000555046 FAM106AQ4KMX7 169 aa8.18□□□□□ -1.1
TMEM260-206ENST00000555046 NMSQ5H8A3 153 aa8.18□□□□□ -1.1
TMEM260-206ENST00000555046 ETV3LQ6ZN32 361 aa8.18□□□□□ -1.1
TMEM260-206ENST00000555046 Q6ZRM9 215 aa8.18□□□□□ -1.1
TMEM260-206ENST00000555046 ZNF114Q8NC26 417 aa8.18□□□□□ -1.1
TMEM260-206ENST00000555046 OR1S1Q8NH92 325 aa8.18□□□□□ -1.1
TMEM260-206ENST00000555046 LHFPL5Q8TAF8 219 aa8.18□□□□□ -1.1
TMEM260-206ENST00000555046 C20orf85Q9H1P6 137 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms