RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 OR52E6Q96RD3 313 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 HIST1H2BNQ99877 126 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 HIST1H2BMQ99879 126 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 HSPB9Q9BQS6 159 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 DERL1Q9BUN8 251 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 TMEM147Q9BVK8 224 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 CHST6Q9GZX3 395 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 PRTFDC1Q9NRG1 225 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 FBXL12Q9NXK8 326 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 MRPL27Q9P0M9 148 aaKnown RBP1.18□□□□□ -2.22
SCFD1-213ENST00000554776 RSL24D1Q9UHA3 163 aaKnown RBP1.18□□□□□ -2.22
SCFD1-213ENST00000554776 PRELID3BQ9Y3B1 194 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 MDC1Q14676 2089 aaKnown RBP1.18□□□□□ -2.22
SCFD1-213ENST00000554776 FN1P02751 2386 aaKnown RBP1.18□□□□□ -2.22
SCFD1-213ENST00000554776 SCAF11Q99590 1463 aaKnown RBP1.18□□□□□ -2.22
SCFD1-213ENST00000554776 TRAV26-2A0A0B4J265 109 aa1.17□□□□□ -2.22
SCFD1-213ENST00000554776 SIGLEC16A6NMB1 481 aa1.17□□□□□ -2.22
SCFD1-213ENST00000554776 CIAO1O76071 339 aa1.17□□□□□ -2.22
SCFD1-213ENST00000554776 CRYZL1O95825 349 aa1.17□□□□□ -2.22
SCFD1-213ENST00000554776 GPX2P18283 190 aa1.17□□□□□ -2.22
SCFD1-213ENST00000554776 AP3S2P59780 193 aa1.17□□□□□ -2.22
SCFD1-213ENST00000554776 HIST1H4AP62805 103 aaKnown RBP1.17□□□□□ -2.22
SCFD1-213ENST00000554776 CCL20P78556 96 aa1.17□□□□□ -2.22
SCFD1-213ENST00000554776 SRSF6Q13247 344 aaKnown RBP1.17□□□□□ -2.22
SCFD1-213ENST00000554776 MOGQ16653 247 aa1.17□□□□□ -2.22
SCFD1-213ENST00000554776 C7orf65Q6ZTY9 151 aa1.17□□□□□ -2.22
SCFD1-213ENST00000554776 S100A7AQ86SG5 101 aa1.17□□□□□ -2.22
SCFD1-213ENST00000554776 CLVS1Q8IUQ0 354 aaPredicted RBP1.17□□□□□ -2.22
SCFD1-213ENST00000554776 DYNAPQ8N1N2 210 aa1.17□□□□□ -2.22
SCFD1-213ENST00000554776 DNAJC9Q8WXX5 260 aa1.17□□□□□ -2.22
SCFD1-213ENST00000554776 CST9LQ9H4G1 147 aa1.17□□□□□ -2.22
SCFD1-213ENST00000554776 C14orf105Q9NVL8 296 aa1.17□□□□□ -2.22
SCFD1-213ENST00000554776 CCDC144AA2RUR9 1427 aa1.16□□□□□ -2.22
SCFD1-213ENST00000554776 EXOC1LA0A1B0GW35 172 aa1.16□□□□□ -2.22
SCFD1-213ENST00000554776 PQLC2LA1A4F0 135 aa1.16□□□□□ -2.22
SCFD1-213ENST00000554776 MEIS3P1A6NDR6 274 aa1.16□□□□□ -2.22
SCFD1-213ENST00000554776 DPRXA6NFQ7 191 aa1.16□□□□□ -2.22
SCFD1-213ENST00000554776 OR51F1A6NGY5 319 aa1.16□□□□□ -2.22
SCFD1-213ENST00000554776 TTRP02766 147 aa1.16□□□□□ -2.22
SCFD1-213ENST00000554776 GPX1P07203 203 aa1.16□□□□□ -2.22
SCFD1-213ENST00000554776 ANP32AP39687 249 aaKnown RBP1.16□□□□□ -2.22
SCFD1-213ENST00000554776 CDK10Q15131 360 aa1.16□□□□□ -2.22
SCFD1-213ENST00000554776 TMEM86AQ8N2M4 240 aa1.16□□□□□ -2.22
SCFD1-213ENST00000554776 H1FXQ92522 213 aaKnown RBP1.16□□□□□ -2.22
SCFD1-213ENST00000554776 TSPAN32Q96QS1 320 aa1.16□□□□□ -2.22
SCFD1-213ENST00000554776 COMMD5Q9GZQ3 224 aa1.16□□□□□ -2.22
SCFD1-213ENST00000554776 RNASE7Q9H1E1 156 aaKnown RBP1.16□□□□□ -2.22
SCFD1-213ENST00000554776 DCSTAMPQ9H295 470 aa1.16□□□□□ -2.22
SCFD1-213ENST00000554776 GLTPQ9NZD2 209 aa1.16□□□□□ -2.22
SCFD1-213ENST00000554776 CRCT1Q9UGL9 99 aa1.16□□□□□ -2.22
SCFD1-213ENST00000554776 ROBO3Q96MS0 1386 aa1.16□□□□□ -2.22
SCFD1-213ENST00000554776 KIF13BQ9NQT8 1826 aa1.15□□□□□ -2.22
SCFD1-213ENST00000554776 TRAV9-1A0A075B6T8 112 aa1.15□□□□□ -2.23
SCFD1-213ENST00000554776 TRBV10-2A0A0K0K1G8 114 aa1.15□□□□□ -2.23
SCFD1-213ENST00000554776 IRGMA1A4Y4 181 aa1.15□□□□□ -2.23
SCFD1-213ENST00000554776 CRPP02741 224 aa1.15□□□□□ -2.23
SCFD1-213ENST00000554776 C1QAP02745 245 aa1.15□□□□□ -2.23
SCFD1-213ENST00000554776 SHBGP04278 402 aa1.15□□□□□ -2.23
SCFD1-213ENST00000554776 IFNA6P05013 189 aa1.15□□□□□ -2.23
SCFD1-213ENST00000554776 CTXN2P0C2S0 81 aa1.15□□□□□ -2.23
SCFD1-213ENST00000554776 UBBP0CG47 229 aa1.15□□□□□ -2.23
SCFD1-213ENST00000554776 MAGEA12P43365 314 aa1.15□□□□□ -2.23
SCFD1-213ENST00000554776 FADDQ13158 208 aa1.15□□□□□ -2.23
SCFD1-213ENST00000554776 ARHGAP11BQ3KRB8 267 aa1.15□□□□□ -2.23
SCFD1-213ENST00000554776 IBA57Q5T440 356 aaKnown RBP1.15□□□□□ -2.23
SCFD1-213ENST00000554776 RPL22L1Q6P5R6 122 aaKnown RBP1.15□□□□□ -2.23
SCFD1-213ENST00000554776 C9orf163Q8N9P6 203 aa1.15□□□□□ -2.23
SCFD1-213ENST00000554776 OR52R1Q8NGF1 315 aa1.15□□□□□ -2.23
SCFD1-213ENST00000554776 MCFD2Q8NI22 146 aa1.15□□□□□ -2.23
SCFD1-213ENST00000554776 PRAP1Q96NZ9 151 aa1.15□□□□□ -2.23
SCFD1-213ENST00000554776 NIPSNAP1Q9BPW8 284 aa1.15□□□□□ -2.23
SCFD1-213ENST00000554776 C8orf4Q9NR00 106 aa1.15□□□□□ -2.23
SCFD1-213ENST00000554776 DOK5Q9P104 306 aa1.15□□□□□ -2.23
SCFD1-213ENST00000554776 SLC22A13Q9Y226 551 aa1.15□□□□□ -2.23
SCFD1-213ENST00000554776 TMEM56-RWDD3S4R434 201 aa1.15□□□□□ -2.23
SCFD1-213ENST00000554776 DISP1Q96F81 1524 aa1.15□□□□□ -2.23
SCFD1-213ENST00000554776 MYH11P35749 1972 aa1.14□□□□□ -2.23
SCFD1-213ENST00000554776 TRGV2A0A075B6R0 118 aa1.14□□□□□ -2.23
SCFD1-213ENST00000554776 IBA57-AS1B1ANH7 110 aa1.14□□□□□ -2.23
SCFD1-213ENST00000554776 BUB1B-PAK6H3BSN5 160 aa1.14□□□□□ -2.23
SCFD1-213ENST00000554776 PIRO00625 290 aa1.14□□□□□ -2.23
SCFD1-213ENST00000554776 FADS1O60427 444 aa1.14□□□□□ -2.23
SCFD1-213ENST00000554776 CRYGAP11844 174 aa1.14□□□□□ -2.23
SCFD1-213ENST00000554776 ERVS71-1P61550 626 aa1.14□□□□□ -2.23
SCFD1-213ENST00000554776 CCL7P80098 99 aa1.14□□□□□ -2.23
SCFD1-213ENST00000554776 REEP5Q00765 189 aa1.14□□□□□ -2.23
SCFD1-213ENST00000554776 EDDM3AQ14507 147 aa1.14□□□□□ -2.23
SCFD1-213ENST00000554776 OR6V1Q8N148 313 aa1.14□□□□□ -2.23
SCFD1-213ENST00000554776 ZNF439Q8NDP4 499 aa1.14□□□□□ -2.23
SCFD1-213ENST00000554776 WFDC11Q8NEX6 87 aa1.14□□□□□ -2.23
SCFD1-213ENST00000554776 RASSF5Q8WWW0 418 aa1.14□□□□□ -2.23
SCFD1-213ENST00000554776 TOMM6Q96B49 74 aa1.14□□□□□ -2.23
SCFD1-213ENST00000554776 Q96M85 177 aa1.14□□□□□ -2.23
SCFD1-213ENST00000554776 CMSS1Q9BQ75 279 aaKnown RBP1.14□□□□□ -2.23
SCFD1-213ENST00000554776 MRPL32Q9BYC8 188 aaKnown RBP1.14□□□□□ -2.23
SCFD1-213ENST00000554776 TRIM4Q9C037 500 aa1.14□□□□□ -2.23
SCFD1-213ENST00000554776 UQCC1Q9NVA1 299 aa1.14□□□□□ -2.23
SCFD1-213ENST00000554776 IDI2-AS1Q9NZ38 188 aa1.14□□□□□ -2.23
SCFD1-213ENST00000554776 BAIAP2Q9UQB8 552 aa1.14□□□□□ -2.23
SCFD1-213ENST00000554776 CYSLTR1Q9Y271 337 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms