RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 CRIP2P52943 208 aaPredicted RBP11.36□□□□□ -0.59
SHOX2-206ENST00000554685 HILS1P60008 231 aa11.36□□□□□ -0.59
SHOX2-206ENST00000554685 HBG1P69891 147 aa11.36□□□□□ -0.59
SHOX2-206ENST00000554685 HBG2P69892 147 aa11.36□□□□□ -0.59
SHOX2-206ENST00000554685 TMEM252Q8N6L7 170 aa11.36□□□□□ -0.59
SHOX2-206ENST00000554685 ZNF114Q8NC26 417 aa11.36□□□□□ -0.59
SHOX2-206ENST00000554685 OR10W1Q8NGF6 305 aa11.36□□□□□ -0.59
SHOX2-206ENST00000554685 ZNF580Q9UK33 172 aa11.36□□□□□ -0.59
SHOX2-206ENST00000554685 CELSR1Q9NYQ6 3014 aa11.36□□□□□ -0.59
SHOX2-206ENST00000554685 A0A1B0GW64 132 aa11.35□□□□□ -0.59
SHOX2-206ENST00000554685 FAM24AA6NFZ4 105 aa11.35□□□□□ -0.59
SHOX2-206ENST00000554685 NPIPB5A8MRT5 1133 aa11.35□□□□□ -0.59
SHOX2-206ENST00000554685 AP4M1O00189 453 aa11.35□□□□□ -0.59
SHOX2-206ENST00000554685 CORTO00230 105 aa11.35□□□□□ -0.59
SHOX2-206ENST00000554685 ATP6V0E1O15342 81 aa11.35□□□□□ -0.59
SHOX2-206ENST00000554685 IGF1P05019 195 aa11.35□□□□□ -0.59
SHOX2-206ENST00000554685 HKR1P10072 659 aa11.35□□□□□ -0.59
SHOX2-206ENST00000554685 SULT1A1P50225 295 aa11.35□□□□□ -0.59
SHOX2-206ENST00000554685 NDPQ00604 133 aa11.35□□□□□ -0.59
SHOX2-206ENST00000554685 EWSR1Q01844 656 aaKnown RBP eCLIP11.35□□□□□ -0.59
SHOX2-206ENST00000554685 WT1-ASQ06250 92 aa11.35□□□□□ -0.59
SHOX2-206ENST00000554685 BSXQ3C1V8 233 aa11.35□□□□□ -0.59
SHOX2-206ENST00000554685 C2orf83Q53S99 150 aa11.35□□□□□ -0.59
SHOX2-206ENST00000554685 TMEM14EPQ6UXP3 125 aa11.35□□□□□ -0.59
SHOX2-206ENST00000554685 PAIP2BQ9ULR5 123 aaKnown RBP11.35□□□□□ -0.59
SHOX2-206ENST00000554685 TLN2Q9Y4G6 2542 aa11.35□□□□□ -0.59
SHOX2-206ENST00000554685 RNF222A6NCQ9 220 aa11.34□□□□□ -0.59
SHOX2-206ENST00000554685 C15orf62A8K5M9 175 aa11.34□□□□□ -0.59
SHOX2-206ENST00000554685 IFNA4P05014 189 aa11.34□□□□□ -0.59
SHOX2-206ENST00000554685 CRYBA1P05813 215 aa11.34□□□□□ -0.59
SHOX2-206ENST00000554685 CRYGCP07315 174 aa11.34□□□□□ -0.59
SHOX2-206ENST00000554685 RNASE1P07998 156 aaKnown RBP11.34□□□□□ -0.59
SHOX2-206ENST00000554685 RNASE2P10153 161 aaKnown RBP11.34□□□□□ -0.59
SHOX2-206ENST00000554685 AREGP15514 252 aa11.34□□□□□ -0.59
SHOX2-206ENST00000554685 BLCAPP62952 87 aa11.34□□□□□ -0.59
SHOX2-206ENST00000554685 AKIRIN2Q53H80 203 aa11.34□□□□□ -0.59
SHOX2-206ENST00000554685 ARSJQ5FYB0 599 aaPredicted RBP11.34□□□□□ -0.59
SHOX2-206ENST00000554685 UNQ5815/PRO19632Q6UWF5 114 aa11.34□□□□□ -0.59
SHOX2-206ENST00000554685 KCNRGQ8N5I3 272 aa11.34□□□□□ -0.59
SHOX2-206ENST00000554685 TTC9CQ8N5M4 171 aa11.34□□□□□ -0.59
SHOX2-206ENST00000554685 OR10P1Q8NGE3 313 aa11.34□□□□□ -0.59
SHOX2-206ENST00000554685 OR1P1Q8NH06 330 aa11.34□□□□□ -0.59
SHOX2-206ENST00000554685 PINX1Q96BK5 328 aaKnown RBP11.34□□□□□ -0.59
SHOX2-206ENST00000554685 OR4C12Q96R67 309 aa11.34□□□□□ -0.59
SHOX2-206ENST00000554685 FAM103A1Q9BTL3 118 aaKnown RBP11.34□□□□□ -0.59
SHOX2-206ENST00000554685 GON7Q9BXV9 100 aa11.34□□□□□ -0.59
SHOX2-206ENST00000554685 HSPB11Q9Y547 144 aa11.34□□□□□ -0.59
SHOX2-206ENST00000554685 F11RQ9Y624 299 aaKnown RBP11.34□□□□□ -0.59
SHOX2-206ENST00000554685 TRAV41A0A0B4J266 112 aa11.33□□□□□ -0.6
SHOX2-206ENST00000554685 IGSF23A1L1A6 192 aa11.33□□□□□ -0.6
SHOX2-206ENST00000554685 SH2D7A6NKC9 451 aaPredicted RBP11.33□□□□□ -0.6
SHOX2-206ENST00000554685 TAAR5O14804 337 aa11.33□□□□□ -0.6
SHOX2-206ENST00000554685 TCF21O43680 179 aa11.33□□□□□ -0.6
SHOX2-206ENST00000554685 METTL15P1P0C7V9 234 aa11.33□□□□□ -0.6
SHOX2-206ENST00000554685 EGR2P11161 476 aaPredicted RBP11.33□□□□□ -0.6
SHOX2-206ENST00000554685 DEFA4P12838 97 aa11.33□□□□□ -0.6
SHOX2-206ENST00000554685 CTRB1P17538 263 aa11.33□□□□□ -0.6
SHOX2-206ENST00000554685 S100A11P31949 105 aa11.33□□□□□ -0.6
SHOX2-206ENST00000554685 AP2S1P53680 142 aaPredicted RBP11.33□□□□□ -0.6
SHOX2-206ENST00000554685 ECSCRQ19T08 205 aa11.33□□□□□ -0.6
SHOX2-206ENST00000554685 CTRB2Q6GPI1 263 aa11.33□□□□□ -0.6
SHOX2-206ENST00000554685 ETV3LQ6ZN32 361 aa11.33□□□□□ -0.6
SHOX2-206ENST00000554685 STPG2Q8N412 459 aa11.33□□□□□ -0.6
SHOX2-206ENST00000554685 LFNGQ8NES3 379 aa11.33□□□□□ -0.6
SHOX2-206ENST00000554685 FAM110DQ8TAY7 271 aaPredicted RBP11.33□□□□□ -0.6
SHOX2-206ENST00000554685 RNASEH2CQ8TDP1 164 aaKnown RBP11.33□□□□□ -0.6
SHOX2-206ENST00000554685 DUX5Q96PT3 197 aa11.33□□□□□ -0.6
SHOX2-206ENST00000554685 P2RX4Q99571 388 aa11.33□□□□□ -0.6
SHOX2-206ENST00000554685 HIVEP1P15822 2718 aa11.32□□□□□ -0.6
SHOX2-206ENST00000554685 KANTRA0A1W2PQU2 76 aa11.32□□□□□ -0.6
SHOX2-206ENST00000554685 FBXO24O75426 580 aa11.32□□□□□ -0.6
SHOX2-206ENST00000554685 DFFBO76075 338 aa11.32□□□□□ -0.6
SHOX2-206ENST00000554685 REG1AP05451 166 aa11.32□□□□□ -0.6
SHOX2-206ENST00000554685 APELAP0DMC3 54 aa11.32□□□□□ -0.6
SHOX2-206ENST00000554685 HIST1H1BP16401 226 aaKnown RBP11.32□□□□□ -0.6
SHOX2-206ENST00000554685 UBA52P62987 128 aaKnown RBP11.32□□□□□ -0.6
SHOX2-206ENST00000554685 EXOSC2Q13868 293 aaKnown RBP11.32□□□□□ -0.6
SHOX2-206ENST00000554685 ATP6V1FQ16864 119 aa11.32□□□□□ -0.6
SHOX2-206ENST00000554685 LILRB2Q8N423 598 aa11.32□□□□□ -0.6
SHOX2-206ENST00000554685 C9orf62Q8N4C0 152 aa11.32□□□□□ -0.6
SHOX2-206ENST00000554685 OR1S2Q8NGQ3 325 aa11.32□□□□□ -0.6
SHOX2-206ENST00000554685 ARL6Q9H0F7 186 aa11.32□□□□□ -0.6
SHOX2-206ENST00000554685 ESM1Q9NQ30 184 aa11.32□□□□□ -0.6
SHOX2-206ENST00000554685 THYN1Q9P016 225 aa11.32□□□□□ -0.6
SHOX2-206ENST00000554685 FBXO7Q9Y3I1 522 aa11.32□□□□□ -0.6
SHOX2-206ENST00000554685 RPS10-NUDT3A0A1W2PQS6 291 aa11.31□□□□□ -0.6
SHOX2-206ENST00000554685 FAM181BA6NEQ2 426 aa11.31□□□□□ -0.6
SHOX2-206ENST00000554685 CST7O76096 145 aa11.31□□□□□ -0.6
SHOX2-206ENST00000554685 CXCL2P19875 107 aa11.31□□□□□ -0.6
SHOX2-206ENST00000554685 NKX2-5P52952 324 aaPredicted RBP11.31□□□□□ -0.6
SHOX2-206ENST00000554685 LGALSLQ3ZCW2 172 aaPredicted RBP11.31□□□□□ -0.6
SHOX2-206ENST00000554685 ASPHD1Q5U4P2 390 aa11.31□□□□□ -0.6
SHOX2-206ENST00000554685 PVRIGQ6DKI7 326 aa11.31□□□□□ -0.6
SHOX2-206ENST00000554685 OR8G2PQ6IF36 304 aa11.31□□□□□ -0.6
SHOX2-206ENST00000554685 ETFRF1Q6IPR1 90 aa11.31□□□□□ -0.6
SHOX2-206ENST00000554685 TMUB2Q71RG4 321 aa11.31□□□□□ -0.6
SHOX2-206ENST00000554685 Q8N2B8 174 aa11.31□□□□□ -0.6
SHOX2-206ENST00000554685 ARPC5LQ9BPX5 153 aa11.31□□□□□ -0.6
SHOX2-206ENST00000554685 GGACTQ9BVM4 153 aa11.31□□□□□ -0.6
SHOX2-206ENST00000554685 WNT10AQ9GZT5 417 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms