RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 PCNPQ8WW12 178 aaKnown RBP4.36□□□□□ -1.71
ATXN3-226ENST00000554350 HPSE2Q8WWQ2 592 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 ERGIC1Q969X5 290 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 GINS3Q9BRX5 216 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 HDHD3Q9BSH5 251 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-226ENST00000554350 CABLES2Q9BTV7 478 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 PAPOLGQ9BWT3 736 aaKnown RBP4.36□□□□□ -1.71
ATXN3-226ENST00000554350 TOLLIPQ9H0E2 274 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 OR51I2Q9H344 312 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 TAF9BQ9HBM6 251 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 MTCH1Q9NZJ7 389 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 KIAA1456Q9P272 454 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 POLDIP2Q9Y2S7 368 aa4.36□□□□□ -1.71
ATXN3-226ENST00000554350 STRAPQ9Y3F4 350 aaKnown RBP4.36□□□□□ -1.71
ATXN3-226ENST00000554350 A0A1B0GVY2 172 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 A0A1B0GWJ7 208 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 MSGN1A6NI15 193 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 IQCF6A8MYZ5 107 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 ZNF732B4DXR9 585 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 UMAD1C9J7I0 102 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 H0Y980 276 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-226ENST00000554350 DEGS1O15121 323 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 SAP30O75446 220 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 SNAPINO95295 136 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 BRI3O95415 125 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 MBPP02686 304 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-226ENST00000554350 CD5P06127 495 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 RBMY1CP0DJD4 496 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 SPP1P10451 314 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 AADACP22760 399 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 HAAOP46952 286 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 INSL3P51460 131 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 PAX5Q02548 391 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 ZNF266Q14584 549 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 ATXN7L3Q14CW9 347 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-226ENST00000554350 ZNF146Q15072 292 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 SPIN3Q5JUX0 258 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 LGALS9CQ6DKI2 356 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 FAM58AQ8N1B3 248 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 DYNAPQ8N1N2 210 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 TCTEX1D1Q8N7M0 179 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 ZNF565Q8N9K5 539 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 ZBTB34Q8NCN2 500 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 LFNGQ8NES3 379 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 MAFIPQ8WZ33 124 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 LSM10Q969L4 123 aaKnown RBP4.35□□□□□ -1.71
ATXN3-226ENST00000554350 TSNAXQ99598 290 aaKnown RBP4.35□□□□□ -1.71
ATXN3-226ENST00000554350 MICU1Q9BPX6 476 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 RTL8AQ9BWD3 113 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 FGF23Q9GZV9 251 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-226ENST00000554350 SLC25A31Q9H0C2 315 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 C11orf1Q9H5F2 150 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 TUBA4BQ9H853 241 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 SCRT2Q9NQ03 307 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 GSKIPQ9P0R6 139 aa4.35□□□□□ -1.71
ATXN3-226ENST00000554350 KLK5Q9Y337 293 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-226ENST00000554350 A0A1B0GU03 582 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 ZNF705EA8MWA4 302 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-226ENST00000554350 DNASE2O00115 360 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-226ENST00000554350 PITX3O75364 302 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 NDUFS6O75380 124 aaKnown RBP4.34□□□□□ -1.71
ATXN3-226ENST00000554350 APOC3P02656 99 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 ARG1P05089 322 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 SELLP14151 372 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 BCL3P20749 454 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 F2RP25116 425 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 NKX2-1P43699 371 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-226ENST00000554350 NPBWR2P48146 333 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 GPM6AP51674 278 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 TAS2R30P59541 319 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 S100A10P60903 97 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 HLA-DRB3P79483 266 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 MZT1Q08AG7 82 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 BTN1A1Q13410 526 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 FHL3Q13643 280 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 NMSQ5H8A3 153 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 FAM74A1Q5RGS3 127 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 RPL7L1Q6DKI1 246 aaKnown RBP4.34□□□□□ -1.71
ATXN3-226ENST00000554350 Q6P435 159 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 FAM122CQ6P4D5 195 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 CEMP1Q6PRD7 247 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-226ENST00000554350 DPPA3Q6W0C5 159 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 ACP7Q6ZNF0 438 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 ZNF826PQ6ZT77 177 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 LYZL2Q7Z4W2 148 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 ZNF429Q86V71 674 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 H1FOOQ8IZA3 346 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-226ENST00000554350 SELENOHQ8IZQ5 122 aaKnown RBP4.34□□□□□ -1.71
ATXN3-226ENST00000554350 OR2C3Q8N628 320 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 DMBX1Q8NFW5 382 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 MRPL30Q8TCC3 161 aaKnown RBP4.34□□□□□ -1.71
ATXN3-226ENST00000554350 TMED6Q8WW62 240 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 TOMM40LQ969M1 308 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 SLAMF9Q96A28 289 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 GNPNAT1Q96EK6 184 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-226ENST00000554350 NRIP2Q9BQI9 281 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 NKX6-2Q9C056 277 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-226ENST00000554350 HES4Q9HCC6 221 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 ZC4H2Q9NQZ6 224 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms