RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 RBMXP38159 391 aaKnown RBP3.35□□□□□ -1.87
RDH11-204ENST00000553578 ZNF121P58317 390 aaPredicted RBP3.35□□□□□ -1.87
RDH11-204ENST00000553578 GRB2P62993 217 aaKnown RBP3.35□□□□□ -1.87
RDH11-204ENST00000553578 ARL16Q0P5N6 197 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 ELOCQ15369 112 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 MEIG1Q5JSS6 88 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 SLC25A34Q6PIV7 304 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 IL17RELQ6ZVW7 336 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 OR5AK2Q8NH90 309 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 AQP10Q96PS8 301 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 ST20Q9HBF5 79 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 KLHDC2Q9Y2U9 406 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 IER3IP1Q9Y5U9 82 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 RTTNQ86VV8 2226 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 TRGV10A0A0A0MS01 117 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 FRG2CA6NGY1 282 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 H3BP45 60 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 RS1O15537 224 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 PLA2G1BP04054 148 aaKnown RBP3.35□□□□□ -1.87
RDH11-204ENST00000553578 GYPBP06028 91 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 PPICP45877 212 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 TAS2R46P59540 309 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 RHOBP62745 196 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 CCL20P78556 96 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 FHL3Q13643 280 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 PMCHL1Q16048 86 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 TMEM176BQ3YBM2 270 aaPredicted RBP3.35□□□□□ -1.87
RDH11-204ENST00000553578 RASL11AQ6T310 242 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 FAM159AQ6UWV7 190 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 POC1AQ8NBT0 407 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 OR1L8Q8NGR8 309 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 PP6455Q8WZ26 134 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 AJUBAQ96IF1 538 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 GMPPAQ96IJ6 420 aaPredicted RBP3.35□□□□□ -1.87
RDH11-204ENST00000553578 WDR61Q9GZS3 305 aaKnown RBP3.35□□□□□ -1.87
RDH11-204ENST00000553578 C6orf106Q9H6K1 298 aaPredicted RBP3.35□□□□□ -1.87
RDH11-204ENST00000553578 EHFQ9NZC4 300 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 CEBPZOSA8MTT3 80 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.35□□□□□ -1.87
RDH11-204ENST00000553578 H0YGG7 62 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 SLC2A10O95528 541 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 HSPB1P04792 205 aaKnown RBP3.35□□□□□ -1.87
RDH11-204ENST00000553578 SEC11BP0C7V7 166 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 FUT6P51993 359 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 UCNP55089 124 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 LCN12Q6JVE5 192 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 ZNF584Q8IVC4 421 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 SFTPA2Q8IWL1 248 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 NFAM1Q8NET5 270 aaPredicted RBP3.35□□□□□ -1.87
RDH11-204ENST00000553578 C8orf46Q8TAG6 207 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 SLC37A2Q8TED4 501 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 AQP3Q92482 292 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 RASL10BQ96S79 203 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 NMES1Q9C002 83 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 SH3BGRL3Q9H299 93 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 TMEM242Q9NWH2 141 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 C1RLQ9NZP8 487 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 PKIGQ9Y2B9 76 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 HILPDAQ9Y5L2 63 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 V9GY05 133 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 ATG2BQ96BY7 2078 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 CABIN1Q9Y6J0 2220 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 CENPVL1A0A0U1RR11 272 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 CENPVL3A0A0U1RRI6 287 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 ANGPTL7O43827 346 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 CHST1O43916 411 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 MT-ATP8P03928 68 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 HMGN2P05204 90 aaKnown RBP3.35□□□□□ -1.87
RDH11-204ENST00000553578 ZNF43P17038 809 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 ATP6V0CP27449 155 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 CD38P28907 300 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 CTRLP40313 264 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 SLURP1P55000 103 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 PPP1CBP62140 327 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 ETDBQ3ZM63 59 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 LYRM7Q5U5X0 104 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 C20orf196Q8IYI0 205 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 OR1L3Q8NH93 324 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 ZNF721Q8TF20 911 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 POLR1DQ9Y2S0 133 aa3.35□□□□□ -1.87
RDH11-204ENST00000553578 SCN3AQ9NY46 2000 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 TRAV9-2A0A087WT02 112 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 A0A087WUU8 490 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 FAM24AA6NFZ4 105 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 STK17BO94768 372 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 HBE1P02100 147 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 GAPDHP04406 335 aaKnown RBP3.34□□□□□ -1.87
RDH11-204ENST00000553578 HIST1H1CP16403 213 aaKnown RBP3.34□□□□□ -1.87
RDH11-204ENST00000553578 RPL7P18124 248 aaKnown RBP3.34□□□□□ -1.87
RDH11-204ENST00000553578 CSRP1P21291 193 aaKnown RBP3.34□□□□□ -1.87
RDH11-204ENST00000553578 SLC35B1P78383 322 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 ZNF74Q16587 644 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 KRTAP19-1Q8IUB9 90 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 OR1F12Q8NHA8 337 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 VSTM2AQ8TAG5 236 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 CT55Q8WUE5 264 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 ARPC1AQ92747 370 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 OXGR1Q96P68 337 aa3.34□□□□□ -1.87
RDH11-204ENST00000553578 TMEM74BQ9NUR3 256 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms