RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 FNDC10F2Z333 226 aa12.41□□□□□ -0.42
ABCD4-218ENST00000553486 MYOD1P15172 320 aa12.41□□□□□ -0.42
ABCD4-218ENST00000553486 TAGLN2P37802 199 aaKnown RBP12.41□□□□□ -0.42
ABCD4-218ENST00000553486 OPRK1P41145 380 aa12.41□□□□□ -0.42
ABCD4-218ENST00000553486 CEBPGP53567 150 aa12.41□□□□□ -0.42
ABCD4-218ENST00000553486 WDR25Q64LD2 544 aaPredicted RBP12.41□□□□□ -0.42
ABCD4-218ENST00000553486 FAM122CQ6P4D5 195 aa12.41□□□□□ -0.42
ABCD4-218ENST00000553486 CYB561D1Q8N8Q1 229 aa12.41□□□□□ -0.42
ABCD4-218ENST00000553486 COMMD5Q9GZQ3 224 aa12.41□□□□□ -0.42
ABCD4-218ENST00000553486 SLC25A22Q9H936 323 aa12.41□□□□□ -0.42
ABCD4-218ENST00000553486 PUS1Q9Y606 427 aaKnown RBP eCLIP12.41□□□□□ -0.42
ABCD4-218ENST00000553486 IGHV2-26A0A0B4J1V2 119 aa12.4□□□□□ -0.42
ABCD4-218ENST00000553486 RPL8P62917 257 aaKnown RBP12.4□□□□□ -0.42
ABCD4-218ENST00000553486 DIAPH2-AS1Q14236 149 aa12.4□□□□□ -0.42
ABCD4-218ENST00000553486 DTX2Q86UW9 622 aa12.4□□□□□ -0.42
ABCD4-218ENST00000553486 Q8N7P7 452 aa12.4□□□□□ -0.42
ABCD4-218ENST00000553486 OR1L8Q8NGR8 309 aa12.4□□□□□ -0.42
ABCD4-218ENST00000553486 TMEM167AQ8TBQ9 72 aa12.4□□□□□ -0.42
ABCD4-218ENST00000553486 SOD3P08294 240 aa12.39□□□□□ -0.43
ABCD4-218ENST00000553486 FBP1P09467 338 aa12.39□□□□□ -0.43
ABCD4-218ENST00000553486 RAB31Q13636 194 aa12.39□□□□□ -0.43
ABCD4-218ENST00000553486 RAB24Q969Q5 203 aa12.39□□□□□ -0.43
ABCD4-218ENST00000553486 SMR3AQ99954 134 aa12.39□□□□□ -0.43
ABCD4-218ENST00000553486 C20orf24Q9BUV8 137 aa12.39□□□□□ -0.43
ABCD4-218ENST00000553486 CLEC7AQ9BXN2 247 aa12.39□□□□□ -0.43
ABCD4-218ENST00000553486 TUBA4BQ9H853 241 aa12.39□□□□□ -0.43
ABCD4-218ENST00000553486 TNCP24821 2201 aa12.39□□□□□ -0.43
ABCD4-218ENST00000553486 MALRD1Q5VYJ5 2156 aa12.39□□□□□ -0.43
ABCD4-218ENST00000553486 H3BQ15 152 aa12.39□□□□□ -0.43
ABCD4-218ENST00000553486 OPN1MWP04001 364 aa12.39□□□□□ -0.43
ABCD4-218ENST00000553486 LIPFP07098 398 aa12.39□□□□□ -0.43
ABCD4-218ENST00000553486 OPN1MW2P0DN77 364 aa12.39□□□□□ -0.43
ABCD4-218ENST00000553486 OPN1MW3P0DN78 364 aa12.39□□□□□ -0.43
ABCD4-218ENST00000553486 LGALS7P47929 136 aa12.39□□□□□ -0.43
ABCD4-218ENST00000553486 CDC34P49427 236 aaPredicted RBP12.39□□□□□ -0.43
ABCD4-218ENST00000553486 PSMB3P49720 205 aa12.39□□□□□ -0.43
ABCD4-218ENST00000553486 ERHP84090 104 aaKnown RBP12.39□□□□□ -0.43
ABCD4-218ENST00000553486 HLA-DRB5Q30154 266 aa12.39□□□□□ -0.43
ABCD4-218ENST00000553486 VMA21Q3ZAQ7 101 aa12.39□□□□□ -0.43
ABCD4-218ENST00000553486 C2orf83Q53S99 150 aa12.39□□□□□ -0.43
ABCD4-218ENST00000553486 TEPPQ6URK8 271 aa12.39□□□□□ -0.43
ABCD4-218ENST00000553486 C15orf54Q8N8G6 183 aa12.39□□□□□ -0.43
ABCD4-218ENST00000553486 BEND2Q8NDZ0 799 aa12.39□□□□□ -0.43
ABCD4-218ENST00000553486 MGST2Q99735 147 aa12.39□□□□□ -0.43
ABCD4-218ENST00000553486 NIPSNAP3BQ9BS92 247 aa12.39□□□□□ -0.43
ABCD4-218ENST00000553486 MANBALQ9NQG1 85 aa12.39□□□□□ -0.43
ABCD4-218ENST00000553486 ZANQ9Y493 2812 aa12.39□□□□□ -0.43
ABCD4-218ENST00000553486 A0A1W2PN81 502 aa12.38□□□□□ -0.43
ABCD4-218ENST00000553486 A0A1W2PPV4 95 aa12.38□□□□□ -0.43
ABCD4-218ENST00000553486 SEC14L6B5MCN3 397 aa12.38□□□□□ -0.43
ABCD4-218ENST00000553486 IGLV1-47P01700 117 aa12.38□□□□□ -0.43
ABCD4-218ENST00000553486 PAX6P26367 422 aa12.38□□□□□ -0.43
ABCD4-218ENST00000553486 CHRNA7P36544 502 aa12.38□□□□□ -0.43
ABCD4-218ENST00000553486 ARSJQ5FYB0 599 aaPredicted RBP12.38□□□□□ -0.43
ABCD4-218ENST00000553486 LY6G5BQ8NDX9 201 aa12.38□□□□□ -0.43
ABCD4-218ENST00000553486 TVP23CQ96ET8 276 aa12.38□□□□□ -0.43
ABCD4-218ENST00000553486 GGTLC1Q9BX51 225 aa12.38□□□□□ -0.43
ABCD4-218ENST00000553486 CHODLQ9H9P2 273 aa12.38□□□□□ -0.43
ABCD4-218ENST00000553486 NDUFA4L2Q9NRX3 87 aa12.38□□□□□ -0.43
ABCD4-218ENST00000553486 AMMECR1Q9Y4X0 333 aaPredicted RBP12.38□□□□□ -0.43
ABCD4-218ENST00000553486 LSM4Q9Y4Z0 139 aaKnown RBP12.38□□□□□ -0.43
ABCD4-218ENST00000553486 PXMP4Q9Y6I8 212 aa12.38□□□□□ -0.43
ABCD4-218ENST00000553486 INS-IGF2F8WCM5 200 aa12.37□□□□□ -0.43
ABCD4-218ENST00000553486 HMGB3O15347 200 aaKnown RBP12.37□□□□□ -0.43
ABCD4-218ENST00000553486 NDUFS6O75380 124 aaKnown RBP12.37□□□□□ -0.43
ABCD4-218ENST00000553486 AKR1C3P42330 323 aa12.37□□□□□ -0.43
ABCD4-218ENST00000553486 SLC35E3Q7Z769 313 aa12.37□□□□□ -0.43
ABCD4-218ENST00000553486 ENSAO43768 121 aaKnown RBP12.37□□□□□ -0.43
ABCD4-218ENST00000553486 LY6HO94772 140 aa12.37□□□□□ -0.43
ABCD4-218ENST00000553486 IGLV2-23P01705 113 aa12.37□□□□□ -0.43
ABCD4-218ENST00000553486 TMEM249Q2WGJ8 235 aa12.37□□□□□ -0.43
ABCD4-218ENST00000553486 BSXQ3C1V8 233 aa12.37□□□□□ -0.43
ABCD4-218ENST00000553486 Q71RC1 249 aaPredicted RBP12.37□□□□□ -0.43
ABCD4-218ENST00000553486 COLCA2A8K830 154 aa12.36□□□□□ -0.43
ABCD4-218ENST00000553486 BUB1B-PAK6H3BSN5 160 aa12.36□□□□□ -0.43
ABCD4-218ENST00000553486 EIF3GO75821 320 aaKnown RBP eCLIP12.36□□□□□ -0.43
ABCD4-218ENST00000553486 RNASE2P10153 161 aaKnown RBP12.36□□□□□ -0.43
ABCD4-218ENST00000553486 MEF2BQ02080 365 aaPredicted RBP12.36□□□□□ -0.43
ABCD4-218ENST00000553486 Q5PR19 223 aa12.36□□□□□ -0.43
ABCD4-218ENST00000553486 MIC13Q5XKP0 118 aa12.36□□□□□ -0.43
ABCD4-218ENST00000553486 LRRC75A-AS1Q8N1F1 130 aa12.36□□□□□ -0.43
ABCD4-218ENST00000553486 TMPRSS5Q9H3S3 457 aa12.36□□□□□ -0.43
ABCD4-218ENST00000553486 PATZ1Q9HBE1 687 aaKnown RBP12.36□□□□□ -0.43
ABCD4-218ENST00000553486 ONECUT1Q9UBC0 465 aa12.36□□□□□ -0.43
ABCD4-218ENST00000553486 INSIG2Q9Y5U4 225 aa12.36□□□□□ -0.43
ABCD4-218ENST00000553486 YIF1AO95070 293 aa12.35□□□□□ -0.43
ABCD4-218ENST00000553486 RPL29P47914 159 aaKnown RBP12.35□□□□□ -0.43
ABCD4-218ENST00000553486 FAM90A2PQ658T7 463 aa12.35□□□□□ -0.43
ABCD4-218ENST00000553486 TEX45Q8NA69 505 aa12.35□□□□□ -0.43
ABCD4-218ENST00000553486 C1orf159Q96HA4 380 aa12.35□□□□□ -0.43
ABCD4-218ENST00000553486 ZNF430Q9H8G1 570 aaPredicted RBP12.35□□□□□ -0.43
ABCD4-218ENST00000553486 JMJD1CQ15652 2540 aa12.35□□□□□ -0.43
ABCD4-218ENST00000553486 FN1P02751 2386 aaKnown RBP12.35□□□□□ -0.43
ABCD4-218ENST00000553486 SLC25A17O43808 307 aa12.34□□□□□ -0.43
ABCD4-218ENST00000553486 COX7A1P24310 79 aa12.34□□□□□ -0.43
ABCD4-218ENST00000553486 SUB1P53999 127 aaKnown RBP eCLIP12.34□□□□□ -0.43
ABCD4-218ENST00000553486 B2MP61769 119 aa12.34□□□□□ -0.43
ABCD4-218ENST00000553486 TMEM144Q7Z5S9 345 aa12.34□□□□□ -0.43
ABCD4-218ENST00000553486 MOB3BQ86TA1 216 aa12.34□□□□□ -0.43
ABCD4-218ENST00000553486 IQCF2Q8IXL9 164 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms