RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 MOB4Q9Y3A3 225 aa13.96□□□□□ -0.17
PSEN1-206ENST00000553447 IFNA5P01569 189 aa13.95□□□□□ -0.18
PSEN1-206ENST00000553447 HLA-DRB1P01911 266 aa13.95□□□□□ -0.18
PSEN1-206ENST00000553447 AREGP15514 252 aa13.95□□□□□ -0.18
PSEN1-206ENST00000553447 CX3CL1P78423 397 aa13.95□□□□□ -0.18
PSEN1-206ENST00000553447 VWC2Q2TAL6 325 aa13.95□□□□□ -0.18
PSEN1-206ENST00000553447 TUSC1Q2TAM9 212 aa13.95□□□□□ -0.18
PSEN1-206ENST00000553447 C5orf56Q8N8D9 126 aa13.95□□□□□ -0.18
PSEN1-206ENST00000553447 ZNF114Q8NC26 417 aa13.95□□□□□ -0.18
PSEN1-206ENST00000553447 SSMEM1Q8WWF3 244 aa13.95□□□□□ -0.18
PSEN1-206ENST00000553447 C22orf15Q8WYQ4 148 aa13.95□□□□□ -0.18
PSEN1-206ENST00000553447 ARPC1AQ92747 370 aa13.95□□□□□ -0.18
PSEN1-206ENST00000553447 ITPR3Q14573 2671 aa13.95□□□□□ -0.18
PSEN1-206ENST00000553447 HECTD1Q9ULT8 2610 aa13.94□□□□□ -0.18
PSEN1-206ENST00000553447 IGHV7-81A0A0B4J1V7 117 aa13.94□□□□□ -0.18
PSEN1-206ENST00000553447 FGF16O43320 207 aa13.94□□□□□ -0.18
PSEN1-206ENST00000553447 REG1AP05451 166 aa13.94□□□□□ -0.18
PSEN1-206ENST00000553447 SUB1P53999 127 aaKnown RBP eCLIP13.94□□□□□ -0.18
PSEN1-206ENST00000553447 DLK1P80370 383 aa13.94□□□□□ -0.18
PSEN1-206ENST00000553447 LY6EQ16553 131 aa13.94□□□□□ -0.18
PSEN1-206ENST00000553447 EIF5AL1Q6IS14 154 aaKnown RBP13.94□□□□□ -0.18
PSEN1-206ENST00000553447 HSD17B11Q8NBQ5 300 aa13.94□□□□□ -0.18
PSEN1-206ENST00000553447 ABHD5Q8WTS1 349 aa13.94□□□□□ -0.18
PSEN1-206ENST00000553447 P2RX4Q99571 388 aa13.94□□□□□ -0.18
PSEN1-206ENST00000553447 GGACTQ9BVM4 153 aa13.94□□□□□ -0.18
PSEN1-206ENST00000553447 PARD6GQ9BYG4 376 aaPredicted RBP13.94□□□□□ -0.18
PSEN1-206ENST00000553447 UQCC1Q9NVA1 299 aa13.94□□□□□ -0.18
PSEN1-206ENST00000553447 PITPNC1Q9UKF7 332 aa13.94□□□□□ -0.18
PSEN1-206ENST00000553447 ITPR2Q14571 2701 aa13.93□□□□□ -0.18
PSEN1-206ENST00000553447 UBE2L5PA0A1B0GUS4 154 aa13.93□□□□□ -0.18
PSEN1-206ENST00000553447 APELAP0DMC3 54 aa13.93□□□□□ -0.18
PSEN1-206ENST00000553447 NDPQ00604 133 aa13.93□□□□□ -0.18
PSEN1-206ENST00000553447 SLC25A24Q6NUK1 477 aa13.93□□□□□ -0.18
PSEN1-206ENST00000553447 SCGB1C1Q8TD33 95 aa13.93□□□□□ -0.18
PSEN1-206ENST00000553447 TMED6Q8WW62 240 aa13.93□□□□□ -0.18
PSEN1-206ENST00000553447 CREBBPQ92793 2442 aa13.93□□□□□ -0.18
PSEN1-206ENST00000553447 NAV3Q8IVL0 2385 aa13.92□□□□□ -0.18
PSEN1-206ENST00000553447 FBXO24O75426 580 aa13.92□□□□□ -0.18
PSEN1-206ENST00000553447 SPP1P10451 314 aa13.92□□□□□ -0.18
PSEN1-206ENST00000553447 ATP6V0CP27449 155 aa13.92□□□□□ -0.18
PSEN1-206ENST00000553447 FAM74A1Q5RGS3 127 aa13.92□□□□□ -0.18
PSEN1-206ENST00000553447 PVRIGQ6DKI7 326 aa13.92□□□□□ -0.18
PSEN1-206ENST00000553447 C16orf82Q7Z2V1 217 aa13.92□□□□□ -0.18
PSEN1-206ENST00000553447 HSPB9Q9BQS6 159 aa13.92□□□□□ -0.18
PSEN1-206ENST00000553447 FAM103A1Q9BTL3 118 aaKnown RBP13.92□□□□□ -0.18
PSEN1-206ENST00000553447 WDR61Q9GZS3 305 aaKnown RBP13.92□□□□□ -0.18
PSEN1-206ENST00000553447 CSMD1Q96PZ7 3565 aa13.91□□□□□ -0.18
PSEN1-206ENST00000553447 IGHV4-59P01825 116 aa13.91□□□□□ -0.18
PSEN1-206ENST00000553447 SEC11BP0C7V7 166 aa13.91□□□□□ -0.18
PSEN1-206ENST00000553447 IER3P46695 156 aa13.91□□□□□ -0.18
PSEN1-206ENST00000553447 RUNX1Q01196 453 aa13.91□□□□□ -0.18
PSEN1-206ENST00000553447 Q6YL49 198 aa13.91□□□□□ -0.18
PSEN1-206ENST00000553447 RNASEH2CQ8TDP1 164 aaKnown RBP13.91□□□□□ -0.18
PSEN1-206ENST00000553447 GNPNAT1Q96EK6 184 aaPredicted RBP13.91□□□□□ -0.18
PSEN1-206ENST00000553447 ZNF48Q96MX3 618 aaPredicted RBP13.91□□□□□ -0.18
PSEN1-206ENST00000553447 SH3BGRL3Q9H299 93 aa13.91□□□□□ -0.18
PSEN1-206ENST00000553447 SLC25A32Q9H2D1 315 aa13.91□□□□□ -0.18
PSEN1-206ENST00000553447 YAE1D1Q9NRH1 226 aa13.91□□□□□ -0.18
PSEN1-206ENST00000553447 F11RQ9Y624 299 aaKnown RBP13.91□□□□□ -0.18
PSEN1-206ENST00000553447 CSPG4Q6UVK1 2322 aa13.91□□□□□ -0.18
PSEN1-206ENST00000553447 CCDC168Q8NDH2 2452 aa13.9□□□□□ -0.18
PSEN1-206ENST00000553447 RPS10-NUDT3A0A1W2PQS6 291 aa13.9□□□□□ -0.18
PSEN1-206ENST00000553447 FNDC10F2Z333 226 aa13.9□□□□□ -0.18
PSEN1-206ENST00000553447 AMY1AP04745 511 aa13.9□□□□□ -0.18
PSEN1-206ENST00000553447 EGR2P11161 476 aaPredicted RBP13.9□□□□□ -0.18
PSEN1-206ENST00000553447 CTRB1P17538 263 aa13.9□□□□□ -0.18
PSEN1-206ENST00000553447 MDKP21741 143 aaPredicted RBP13.9□□□□□ -0.18
PSEN1-206ENST00000553447 MFAP2P55001 183 aa13.9□□□□□ -0.18
PSEN1-206ENST00000553447 CD69Q07108 199 aa13.9□□□□□ -0.18
PSEN1-206ENST00000553447 ASPHD1Q5U4P2 390 aa13.9□□□□□ -0.18
PSEN1-206ENST00000553447 CTRB2Q6GPI1 263 aa13.9□□□□□ -0.18
PSEN1-206ENST00000553447 SPNS3Q6ZMD2 512 aa13.9□□□□□ -0.18
PSEN1-206ENST00000553447 IL17RELQ6ZVW7 336 aa13.9□□□□□ -0.18
PSEN1-206ENST00000553447 OR1P1Q8NH06 330 aa13.9□□□□□ -0.18
PSEN1-206ENST00000553447 OR5R1Q8NH85 324 aa13.9□□□□□ -0.18
PSEN1-206ENST00000553447 TAF15Q92804 592 aaKnown RBP eCLIP13.9□□□□□ -0.18
PSEN1-206ENST00000553447 PRDM13Q9H4Q3 707 aa13.9□□□□□ -0.18
PSEN1-206ENST00000553447 PLA2G2EQ9NZK7 142 aa13.9□□□□□ -0.18
PSEN1-206ENST00000553447 WDR83OSQ9Y284 106 aa13.9□□□□□ -0.18
PSEN1-206ENST00000553447 FBXO7Q9Y3I1 522 aa13.9□□□□□ -0.18
PSEN1-206ENST00000553447 SMCO3A2RU48 225 aa13.89□□□□□ -0.19
PSEN1-206ENST00000553447 SH2D7A6NKC9 451 aaPredicted RBP13.89□□□□□ -0.19
PSEN1-206ENST00000553447 M0QZK8 103 aa13.89□□□□□ -0.19
PSEN1-206ENST00000553447 CRYGCP07315 174 aa13.89□□□□□ -0.19
PSEN1-206ENST00000553447 FGF7P21781 194 aa13.89□□□□□ -0.19
PSEN1-206ENST00000553447 GPX4P36969 197 aaPredicted RBP13.89□□□□□ -0.19
PSEN1-206ENST00000553447 RAB14P61106 215 aa13.89□□□□□ -0.19
PSEN1-206ENST00000553447 ARSJQ5FYB0 599 aaPredicted RBP13.89□□□□□ -0.19
PSEN1-206ENST00000553447 CLLU1Q5K131 121 aa13.89□□□□□ -0.19
PSEN1-206ENST00000553447 C19orf35Q6ZS72 473 aa13.89□□□□□ -0.19
PSEN1-206ENST00000553447 PCNPQ8WW12 178 aaKnown RBP13.89□□□□□ -0.19
PSEN1-206ENST00000553447 PARP11Q9NR21 331 aa13.89□□□□□ -0.19
PSEN1-206ENST00000553447 BTBD17A6NE02 478 aa13.88□□□□□ -0.19
PSEN1-206ENST00000553447 NPIPB5A8MRT5 1133 aa13.88□□□□□ -0.19
PSEN1-206ENST00000553447 CORTO00230 105 aa13.88□□□□□ -0.19
PSEN1-206ENST00000553447 BTNL8Q6UX41 500 aa13.88□□□□□ -0.19
PSEN1-206ENST00000553447 SLC16A13Q7RTY0 426 aa13.88□□□□□ -0.19
PSEN1-206ENST00000553447 TTC9CQ8N5M4 171 aa13.88□□□□□ -0.19
PSEN1-206ENST00000553447 OR2G3Q8NGZ4 309 aa13.88□□□□□ -0.19
PSEN1-206ENST00000553447 SGMS2Q8NHU3 365 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms