RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 C5orf66Q9H5L9 145 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 EHFQ9NZC4 300 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 COMMD9Q9P000 198 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 PLA2G2DQ9UNK4 145 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 TP53TG1Q9Y2A0 90 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 DMRT1Q9Y5R6 373 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 ETV7Q9Y603 341 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 AGRNO00468 2067 aa7.39□□□□□ -1.23
ACTN1-208ENST00000553370 IGHV3OR16-8A0A075B7F1 116 aa7.38□□□□□ -1.23
ACTN1-208ENST00000553370 TRAV3A0A0B4J244 114 aa7.38□□□□□ -1.23
ACTN1-208ENST00000553370 MEIS3P1A6NDR6 274 aa7.38□□□□□ -1.23
ACTN1-208ENST00000553370 UPK2O00526 184 aa7.38□□□□□ -1.23
ACTN1-208ENST00000553370 YIF1AO95070 293 aa7.38□□□□□ -1.23
ACTN1-208ENST00000553370 ATP6V1G2O95670 118 aa7.38□□□□□ -1.23
ACTN1-208ENST00000553370 PTBP1P26599 531 aaKnown RBP eCLIP7.38□□□□□ -1.23
ACTN1-208ENST00000553370 S100GP29377 79 aa7.38□□□□□ -1.23
ACTN1-208ENST00000553370 SDC2P34741 201 aa7.38□□□□□ -1.23
ACTN1-208ENST00000553370 CBX5P45973 191 aa7.38□□□□□ -1.23
ACTN1-208ENST00000553370 TFPI2P48307 235 aa7.38□□□□□ -1.23
ACTN1-208ENST00000553370 TNFRSF9Q07011 255 aa7.38□□□□□ -1.23
ACTN1-208ENST00000553370 EIF4EBP1Q13541 118 aaPredicted RBP7.38□□□□□ -1.23
ACTN1-208ENST00000553370 CEMP1Q6PRD7 247 aaPredicted RBP7.38□□□□□ -1.23
ACTN1-208ENST00000553370 ZNF818PQ6ZRF7 136 aa7.38□□□□□ -1.23
ACTN1-208ENST00000553370 HOGA1Q86XE5 327 aa7.38□□□□□ -1.23
ACTN1-208ENST00000553370 OR10W1Q8NGF6 305 aa7.38□□□□□ -1.23
ACTN1-208ENST00000553370 LSM10Q969L4 123 aaKnown RBP7.38□□□□□ -1.23
ACTN1-208ENST00000553370 RAB24Q969Q5 203 aa7.38□□□□□ -1.23
ACTN1-208ENST00000553370 GALNT14Q96FL9 552 aa7.38□□□□□ -1.23
ACTN1-208ENST00000553370 PLEKHA2Q9HB19 425 aa7.38□□□□□ -1.23
ACTN1-208ENST00000553370 C21orf62Q9NYP8 219 aa7.38□□□□□ -1.23
ACTN1-208ENST00000553370 IGKV3-7A0A075B6H7 116 aa7.37□□□□□ -1.23
ACTN1-208ENST00000553370 MARCH11A6NNE9 402 aa7.37□□□□□ -1.23
ACTN1-208ENST00000553370 NDUFA4O00483 81 aa7.37□□□□□ -1.23
ACTN1-208ENST00000553370 TSPAN4O14817 238 aa7.37□□□□□ -1.23
ACTN1-208ENST00000553370 MRPS14O60783 128 aaKnown RBP7.37□□□□□ -1.23
ACTN1-208ENST00000553370 SERPINE2P07093 398 aa7.37□□□□□ -1.23
ACTN1-208ENST00000553370 C8orf88P0DMB2 117 aa7.37□□□□□ -1.23
ACTN1-208ENST00000553370 FGF9P31371 208 aaPredicted RBP7.37□□□□□ -1.23
ACTN1-208ENST00000553370 RELQ04864 619 aaPredicted RBP7.37□□□□□ -1.23
ACTN1-208ENST00000553370 UBE2UQ5VVX9 321 aa7.37□□□□□ -1.23
ACTN1-208ENST00000553370 CMTM1Q8IZ96 169 aa7.37□□□□□ -1.23
ACTN1-208ENST00000553370 OR5AP2Q8NGF4 316 aa7.37□□□□□ -1.23
ACTN1-208ENST00000553370 TMEM56Q96MV1 263 aa7.37□□□□□ -1.23
ACTN1-208ENST00000553370 ZNF436Q9C0F3 470 aaPredicted RBP7.37□□□□□ -1.23
ACTN1-208ENST00000553370 RAB26Q9ULW5 256 aa7.37□□□□□ -1.23
ACTN1-208ENST00000553370 OR51B2Q9Y5P1 312 aa7.37□□□□□ -1.23
ACTN1-208ENST00000553370 A0A0A6YYH2 397 aa7.36□□□□□ -1.23
ACTN1-208ENST00000553370 KIR2DL5BA0A0G2JN68 375 aa7.36□□□□□ -1.23
ACTN1-208ENST00000553370 KIR2DL5BA0A0G2JPC4 375 aa7.36□□□□□ -1.23
ACTN1-208ENST00000553370 A6NJ64 397 aa7.36□□□□□ -1.23
ACTN1-208ENST00000553370 CGB1A6NKQ9 187 aa7.36□□□□□ -1.23
ACTN1-208ENST00000553370 NUPL2O15504 423 aaKnown RBP7.36□□□□□ -1.23
ACTN1-208ENST00000553370 KRASP01116 189 aa7.36□□□□□ -1.23
ACTN1-208ENST00000553370 IFNA4P05014 189 aa7.36□□□□□ -1.23
ACTN1-208ENST00000553370 CTSDP07339 412 aaPredicted RBP7.36□□□□□ -1.23
ACTN1-208ENST00000553370 BRWD1-AS2P59051 145 aa7.36□□□□□ -1.23
ACTN1-208ENST00000553370 KIR2DL5AQ8N109 375 aa7.36□□□□□ -1.23
ACTN1-208ENST00000553370 CENPSQ8N2Z9 138 aa7.36□□□□□ -1.23
ACTN1-208ENST00000553370 OR5H6Q8NGV6 325 aa7.36□□□□□ -1.23
ACTN1-208ENST00000553370 OR5H2Q8NGV7 314 aa7.36□□□□□ -1.23
ACTN1-208ENST00000553370 KIR2DL5BQ8NHK3 375 aa7.36□□□□□ -1.23
ACTN1-208ENST00000553370 RNF183Q96D59 192 aa7.36□□□□□ -1.23
ACTN1-208ENST00000553370 AUNIPQ9H7T9 357 aa7.36□□□□□ -1.23
ACTN1-208ENST00000553370 FKBP11Q9NYL4 201 aa7.36□□□□□ -1.23
ACTN1-208ENST00000553370 FBXL17Q9UF56 701 aa7.36□□□□□ -1.23
ACTN1-208ENST00000553370 PRNDQ9UKY0 176 aa7.36□□□□□ -1.23
ACTN1-208ENST00000553370 F11RQ9Y624 299 aaKnown RBP7.36□□□□□ -1.23
ACTN1-208ENST00000553370 FRAS1Q86XX4 4008 aa7.36□□□□□ -1.23
ACTN1-208ENST00000553370 IGHV3-49A0A0A0MS15 119 aa7.35□□□□□ -1.23
ACTN1-208ENST00000553370 TEX50A0A1B0GTY4 177 aa7.35□□□□□ -1.23
ACTN1-208ENST00000553370 MPTX1A8MV57 137 aa7.35□□□□□ -1.23
ACTN1-208ENST00000553370 G6PCP35575 357 aa7.35□□□□□ -1.23
ACTN1-208ENST00000553370 LPAR6P43657 344 aa7.35□□□□□ -1.23
ACTN1-208ENST00000553370 CMC4P56277 68 aaPredicted RBP7.35□□□□□ -1.23
ACTN1-208ENST00000553370 TAS2R46P59540 309 aa7.35□□□□□ -1.23
ACTN1-208ENST00000553370 PAFAH1B2P68402 229 aa7.35□□□□□ -1.23
ACTN1-208ENST00000553370 WT1-ASQ06250 92 aa7.35□□□□□ -1.23
ACTN1-208ENST00000553370 POU2AF1Q16633 256 aa7.35□□□□□ -1.23
ACTN1-208ENST00000553370 ODF3L2Q3SX64 289 aa7.35□□□□□ -1.23
ACTN1-208ENST00000553370 TMEM69Q5SWH9 247 aa7.35□□□□□ -1.23
ACTN1-208ENST00000553370 APRG1Q8IVJ8 170 aa7.35□□□□□ -1.23
ACTN1-208ENST00000553370 SPARTQ8N0X7 666 aa7.35□□□□□ -1.23
ACTN1-208ENST00000553370 TMEM116Q8NCL8 245 aa7.35□□□□□ -1.23
ACTN1-208ENST00000553370 PHLDA1Q8WV24 401 aaPredicted RBP7.35□□□□□ -1.23
ACTN1-208ENST00000553370 SLC25A38Q96DW6 304 aa7.35□□□□□ -1.23
ACTN1-208ENST00000553370 TSC22D3Q99576 134 aa7.35□□□□□ -1.23
ACTN1-208ENST00000553370 ZNF2Q9BSG1 426 aaPredicted RBP7.35□□□□□ -1.23
ACTN1-208ENST00000553370 MFFQ9GZY8 342 aa7.35□□□□□ -1.23
ACTN1-208ENST00000553370 NSG2Q9Y328 171 aa7.35□□□□□ -1.23
ACTN1-208ENST00000553370 C15orf62A8K5M9 175 aa7.34□□□□□ -1.23
ACTN1-208ENST00000553370 DNASE2O00115 360 aaPredicted RBP7.34□□□□□ -1.23
ACTN1-208ENST00000553370 GNG7O60262 68 aa7.34□□□□□ -1.23
ACTN1-208ENST00000553370 PMP2P02689 132 aa7.34□□□□□ -1.23
ACTN1-208ENST00000553370 FGF2P09038 288 aa7.34□□□□□ -1.23
ACTN1-208ENST00000553370 F2RP25116 425 aa7.34□□□□□ -1.23
ACTN1-208ENST00000553370 FCGR2BP31994 310 aaPredicted RBP7.34□□□□□ -1.23
ACTN1-208ENST00000553370 TSPAN5P62079 268 aa7.34□□□□□ -1.23
ACTN1-208ENST00000553370 EWSR1Q01844 656 aaKnown RBP eCLIP7.34□□□□□ -1.23
ACTN1-208ENST00000553370 RBMS2Q15434 407 aaKnown RBP7.34□□□□□ -1.23
ACTN1-208ENST00000553370 NEDD8Q15843 81 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms