RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 C18orf65Q6ZTR6 163 aa10.9□□□□□ -0.66
SMARCC2-212ENST00000552566 HSD17B13Q7Z5P4 300 aaPredicted RBP10.9□□□□□ -0.66
SMARCC2-212ENST00000552566 SLC35E3Q7Z769 313 aa10.9□□□□□ -0.66
SMARCC2-212ENST00000552566 AKAP14Q86UN6 197 aa10.9□□□□□ -0.66
SMARCC2-212ENST00000552566 LINC00482Q8N8I6 264 aa10.9□□□□□ -0.66
SMARCC2-212ENST00000552566 GRPEL2Q8TAA5 225 aa10.9□□□□□ -0.66
SMARCC2-212ENST00000552566 ARPC1AQ92747 370 aa10.9□□□□□ -0.66
SMARCC2-212ENST00000552566 DPF1Q92782 380 aa10.9□□□□□ -0.66
SMARCC2-212ENST00000552566 PLEKHA3Q9HB20 300 aa10.9□□□□□ -0.66
SMARCC2-212ENST00000552566 PARP11Q9NR21 331 aa10.9□□□□□ -0.66
SMARCC2-212ENST00000552566 WI2-2373I1.2A0A1W2PRP0 233 aa10.89□□□□□ -0.67
SMARCC2-212ENST00000552566 PITX3O75364 302 aa10.89□□□□□ -0.67
SMARCC2-212ENST00000552566 NXPH3O95157 252 aa10.89□□□□□ -0.67
SMARCC2-212ENST00000552566 RPP30P78346 268 aaKnown RBP10.89□□□□□ -0.67
SMARCC2-212ENST00000552566 SLC35B1P78383 322 aa10.89□□□□□ -0.67
SMARCC2-212ENST00000552566 TNFRSF9Q07011 255 aa10.89□□□□□ -0.67
SMARCC2-212ENST00000552566 CXorf66Q5JRM2 361 aaPredicted RBP10.89□□□□□ -0.67
SMARCC2-212ENST00000552566 C8orf86Q6ZUL3 223 aa10.89□□□□□ -0.67
SMARCC2-212ENST00000552566 OR4D5Q8NGN0 318 aa10.89□□□□□ -0.67
SMARCC2-212ENST00000552566 SRSF12Q8WXF0 261 aaKnown RBP10.89□□□□□ -0.67
SMARCC2-212ENST00000552566 CIB3Q96Q77 187 aaPredicted RBP10.89□□□□□ -0.67
SMARCC2-212ENST00000552566 HEYLQ9NQ87 328 aaPredicted RBP10.89□□□□□ -0.67
SMARCC2-212ENST00000552566 HSPB7Q9UBY9 170 aa10.89□□□□□ -0.67
SMARCC2-212ENST00000552566 LSM5Q9Y4Y9 91 aaKnown RBP10.89□□□□□ -0.67
SMARCC2-212ENST00000552566 IGHV7-81A0A0B4J1V7 117 aa10.88□□□□□ -0.67
SMARCC2-212ENST00000552566 MSGN1A6NI15 193 aa10.88□□□□□ -0.67
SMARCC2-212ENST00000552566 CYB5BO43169 146 aa10.88□□□□□ -0.67
SMARCC2-212ENST00000552566 SYNGR2O43760 224 aa10.88□□□□□ -0.67
SMARCC2-212ENST00000552566 PFDN1O60925 122 aa10.88□□□□□ -0.67
SMARCC2-212ENST00000552566 PSMB6P28072 239 aa10.88□□□□□ -0.67
SMARCC2-212ENST00000552566 SNCAP37840 140 aa10.88□□□□□ -0.67
SMARCC2-212ENST00000552566 PRCDQ00LT1 54 aa10.88□□□□□ -0.67
SMARCC2-212ENST00000552566 ID3Q02535 119 aa10.88□□□□□ -0.67
SMARCC2-212ENST00000552566 LRRC37A5PQ49AS3 106 aa10.88□□□□□ -0.67
SMARCC2-212ENST00000552566 ETV3LQ6ZN32 361 aa10.88□□□□□ -0.67
SMARCC2-212ENST00000552566 KLHL30-AS1Q8NEE0 82 aa10.88□□□□□ -0.67
SMARCC2-212ENST00000552566 THAP6Q8TBB0 222 aa10.88□□□□□ -0.67
SMARCC2-212ENST00000552566 CHAC2Q8WUX2 184 aa10.88□□□□□ -0.67
SMARCC2-212ENST00000552566 TMEM68Q96MH6 324 aa10.88□□□□□ -0.67
SMARCC2-212ENST00000552566 SRSF8Q9BRL6 282 aaKnown RBP10.88□□□□□ -0.67
SMARCC2-212ENST00000552566 GON7Q9BXV9 100 aa10.88□□□□□ -0.67
SMARCC2-212ENST00000552566 GPR61Q9BZJ8 451 aa10.88□□□□□ -0.67
SMARCC2-212ENST00000552566 MAGT1Q9H0U3 335 aa10.88□□□□□ -0.67
SMARCC2-212ENST00000552566 RBKSQ9H477 322 aa10.88□□□□□ -0.67
SMARCC2-212ENST00000552566 NDUFA4L2Q9NRX3 87 aa10.88□□□□□ -0.67
SMARCC2-212ENST00000552566 LINC01548A6NM66 108 aa10.87□□□□□ -0.67
SMARCC2-212ENST00000552566 AP4M1O00189 453 aa10.87□□□□□ -0.67
SMARCC2-212ENST00000552566 SSSCA1O60232 199 aa10.87□□□□□ -0.67
SMARCC2-212ENST00000552566 IGHG2P01859 326 aa10.87□□□□□ -0.67
SMARCC2-212ENST00000552566 MBPP02686 304 aaPredicted RBP10.87□□□□□ -0.67
SMARCC2-212ENST00000552566 SUB1P53999 127 aaKnown RBP eCLIP10.87□□□□□ -0.67
SMARCC2-212ENST00000552566 POLR2GP62487 172 aaKnown RBP eCLIP10.87□□□□□ -0.67
SMARCC2-212ENST00000552566 AARDQ4LEZ3 155 aa10.87□□□□□ -0.67
SMARCC2-212ENST00000552566 C11orf87Q6NUJ2 197 aa10.87□□□□□ -0.67
SMARCC2-212ENST00000552566 NOXA1Q86UR1 476 aa10.87□□□□□ -0.67
SMARCC2-212ENST00000552566 STPG2Q8N412 459 aa10.87□□□□□ -0.67
SMARCC2-212ENST00000552566 OR2T35Q8NGX2 323 aa10.87□□□□□ -0.67
SMARCC2-212ENST00000552566 DTD1Q8TEA8 209 aa10.87□□□□□ -0.67
SMARCC2-212ENST00000552566 PPP1R1CQ8WVI7 109 aa10.87□□□□□ -0.67
SMARCC2-212ENST00000552566 DUX3Q96PT4 197 aa10.87□□□□□ -0.67
SMARCC2-212ENST00000552566 RAB40CQ96S21 281 aa10.87□□□□□ -0.67
SMARCC2-212ENST00000552566 OR13C7P0DN81 318 aa10.86□□□□□ -0.67
SMARCC2-212ENST00000552566 DEFA4P12838 97 aa10.86□□□□□ -0.67
SMARCC2-212ENST00000552566 MYOD1P15172 320 aa10.86□□□□□ -0.67
SMARCC2-212ENST00000552566 NUP62P37198 522 aaPredicted RBP10.86□□□□□ -0.67
SMARCC2-212ENST00000552566 MYCNOSP40205 109 aa10.86□□□□□ -0.67
SMARCC2-212ENST00000552566 EGFEM1PQ0D2K5 195 aa10.86□□□□□ -0.67
SMARCC2-212ENST00000552566 RAB32Q13637 225 aa10.86□□□□□ -0.67
SMARCC2-212ENST00000552566 SPINK9Q5DT21 86 aa10.86□□□□□ -0.67
SMARCC2-212ENST00000552566 C10orf55Q5SWW7 151 aa10.86□□□□□ -0.67
SMARCC2-212ENST00000552566 UNQ5815/PRO19632Q6UWF5 114 aa10.86□□□□□ -0.67
SMARCC2-212ENST00000552566 COMMD1Q8N668 190 aa10.86□□□□□ -0.67
SMARCC2-212ENST00000552566 HSPB9Q9BQS6 159 aa10.86□□□□□ -0.67
SMARCC2-212ENST00000552566 MCRIP2Q9BUT9 160 aaKnown RBP10.86□□□□□ -0.67
SMARCC2-212ENST00000552566 K7EPK0 472 aa10.85□□□□□ -0.67
SMARCC2-212ENST00000552566 ATP6V0E1O15342 81 aa10.85□□□□□ -0.67
SMARCC2-212ENST00000552566 MPC2O95563 127 aa10.85□□□□□ -0.67
SMARCC2-212ENST00000552566 IFNA10P01566 189 aa10.85□□□□□ -0.67
SMARCC2-212ENST00000552566 IAPPP10997 89 aa10.85□□□□□ -0.67
SMARCC2-212ENST00000552566 ATP5IP56385 69 aaPredicted RBP10.85□□□□□ -0.67
SMARCC2-212ENST00000552566 CD69Q07108 199 aa10.85□□□□□ -0.67
SMARCC2-212ENST00000552566 ECSCRQ19T08 205 aa10.85□□□□□ -0.67
SMARCC2-212ENST00000552566 MRGPRG-AS1Q2M3A8 158 aa10.85□□□□□ -0.67
SMARCC2-212ENST00000552566 TEX38Q6PEX7 206 aa10.85□□□□□ -0.67
SMARCC2-212ENST00000552566 LCNL1Q6ZST4 164 aa10.85□□□□□ -0.67
SMARCC2-212ENST00000552566 LFNGQ8NES3 379 aa10.85□□□□□ -0.67
SMARCC2-212ENST00000552566 FAM103A1Q9BTL3 118 aaKnown RBP10.85□□□□□ -0.67
SMARCC2-212ENST00000552566 RANGRFQ9HD47 186 aaPredicted RBP10.85□□□□□ -0.67
SMARCC2-212ENST00000552566 PSENENQ9NZ42 101 aa10.85□□□□□ -0.67
SMARCC2-212ENST00000552566 PAIP2BQ9ULR5 123 aaKnown RBP10.85□□□□□ -0.67
SMARCC2-212ENST00000552566 RCL1Q9Y2P8 373 aaKnown RBP10.85□□□□□ -0.67
SMARCC2-212ENST00000552566 U3KQ87 197 aa10.85□□□□□ -0.67
SMARCC2-212ENST00000552566 PLXNB1O43157 2135 aa10.85□□□□□ -0.67
SMARCC2-212ENST00000552566 NOTCH3Q9UM47 2321 aa10.84□□□□□ -0.67
SMARCC2-212ENST00000552566 TRAV41A0A0B4J266 112 aa10.84□□□□□ -0.67
SMARCC2-212ENST00000552566 E5RGE8 158 aa10.84□□□□□ -0.67
SMARCC2-212ENST00000552566 RPLP1P05386 114 aaKnown RBP10.84□□□□□ -0.67
SMARCC2-212ENST00000552566 APELAP0DMC3 54 aa10.84□□□□□ -0.67
SMARCC2-212ENST00000552566 HTR2BP41595 481 aa10.84□□□□□ -0.67
SMARCC2-212ENST00000552566 TAS2R30P59541 319 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms