RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 C17orf112F2Z3M2 114 aa10.11□□□□□ -0.79
CACNB3-223ENST00000552480 MPDU1O75352 247 aa10.11□□□□□ -0.79
CACNB3-223ENST00000552480 TGFAP01135 160 aa10.11□□□□□ -0.79
CACNB3-223ENST00000552480 PRH1P02810 166 aa10.11□□□□□ -0.79
CACNB3-223ENST00000552480 SERF2P84101 59 aa10.11□□□□□ -0.79
CACNB3-223ENST00000552480 TMEM249Q2WGJ8 235 aa10.11□□□□□ -0.79
CACNB3-223ENST00000552480 BTNL8Q6UX41 500 aa10.11□□□□□ -0.79
CACNB3-223ENST00000552480 BRD3OSQ6XYD6 125 aa10.11□□□□□ -0.79
CACNB3-223ENST00000552480 MAPK1IP1LQ8NDC0 245 aa10.11□□□□□ -0.79
CACNB3-223ENST00000552480 RNASEH2CQ8TDP1 164 aaKnown RBP10.11□□□□□ -0.79
CACNB3-223ENST00000552480 CITED4Q96RK1 184 aa10.11□□□□□ -0.79
CACNB3-223ENST00000552480 NPCDR1Q9BY65 106 aa10.11□□□□□ -0.79
CACNB3-223ENST00000552480 FBXO7Q9Y3I1 522 aa10.11□□□□□ -0.79
CACNB3-223ENST00000552480 SPTAN1Q13813 2472 aaKnown RBP10.11□□□□□ -0.79
CACNB3-223ENST00000552480 FBN2P35556 2912 aa10.1□□□□□ -0.79
CACNB3-223ENST00000552480 LRRK2Q5S007 2527 aa10.1□□□□□ -0.79
CACNB3-223ENST00000552480 UTP20O75691 2785 aaKnown RBP10.1□□□□□ -0.79
CACNB3-223ENST00000552480 AKAP6Q13023 2319 aa10.1□□□□□ -0.79
CACNB3-223ENST00000552480 A0A0U1RQK1 487 aa10.1□□□□□ -0.79
CACNB3-223ENST00000552480 NCBP2LA6PVI3 153 aaKnown RBP10.1□□□□□ -0.79
CACNB3-223ENST00000552480 CNIH1O95406 144 aa10.1□□□□□ -0.79
CACNB3-223ENST00000552480 AVPP01185 164 aa10.1□□□□□ -0.79
CACNB3-223ENST00000552480 GPX4P36969 197 aaPredicted RBP10.1□□□□□ -0.79
CACNB3-223ENST00000552480 ARSJQ5FYB0 599 aaPredicted RBP10.1□□□□□ -0.79
CACNB3-223ENST00000552480 KLF17Q5JT82 389 aaPredicted RBP10.1□□□□□ -0.79
CACNB3-223ENST00000552480 PVRIGQ6DKI7 326 aa10.1□□□□□ -0.79
CACNB3-223ENST00000552480 TREML4Q6UXN2 200 aa10.1□□□□□ -0.79
CACNB3-223ENST00000552480 ZNF709Q8N972 641 aa10.1□□□□□ -0.79
CACNB3-223ENST00000552480 LYPD6BQ8NI32 183 aa10.1□□□□□ -0.79
CACNB3-223ENST00000552480 FAM213BQ8TBF2 198 aa10.1□□□□□ -0.79
CACNB3-223ENST00000552480 P2RX4Q99571 388 aa10.1□□□□□ -0.79
CACNB3-223ENST00000552480 NPVFQ9HCQ7 196 aa10.1□□□□□ -0.79
CACNB3-223ENST00000552480 SOX15O60248 233 aa10.09□□□□□ -0.79
CACNB3-223ENST00000552480 REG1AP05451 166 aa10.09□□□□□ -0.79
CACNB3-223ENST00000552480 AREGP15514 252 aa10.09□□□□□ -0.79
CACNB3-223ENST00000552480 BPIFB3P59826 476 aa10.09□□□□□ -0.79
CACNB3-223ENST00000552480 AKR1C1Q04828 323 aa10.09□□□□□ -0.79
CACNB3-223ENST00000552480 CD69Q07108 199 aa10.09□□□□□ -0.79
CACNB3-223ENST00000552480 ZNF616Q08AN1 781 aa10.09□□□□□ -0.79
CACNB3-223ENST00000552480 FXYD3Q14802 87 aa10.09□□□□□ -0.79
CACNB3-223ENST00000552480 AANATQ16613 207 aa10.09□□□□□ -0.79
CACNB3-223ENST00000552480 TMEM41BQ5BJD5 291 aa10.09□□□□□ -0.79
CACNB3-223ENST00000552480 ZNF562Q6V9R5 426 aa10.09□□□□□ -0.79
CACNB3-223ENST00000552480 IL34Q6ZMJ4 242 aa10.09□□□□□ -0.79
CACNB3-223ENST00000552480 EIF4E3Q8N5X7 224 aaKnown RBP10.09□□□□□ -0.79
CACNB3-223ENST00000552480 Q8N9W7 124 aa10.09□□□□□ -0.79
CACNB3-223ENST00000552480 ABHD5Q8WTS1 349 aa10.09□□□□□ -0.79
CACNB3-223ENST00000552480 SSMEM1Q8WWF3 244 aa10.09□□□□□ -0.79
CACNB3-223ENST00000552480 CACNG8Q8WXS5 425 aa10.09□□□□□ -0.79
CACNB3-223ENST00000552480 MARC2Q969Z3 335 aa10.09□□□□□ -0.79
CACNB3-223ENST00000552480 FAM96BQ9Y3D0 163 aa10.09□□□□□ -0.79
CACNB3-223ENST00000552480 RAB19A4D1S5 217 aa10.08□□□□□ -0.8
CACNB3-223ENST00000552480 TEX46H3BTG2 121 aa10.08□□□□□ -0.8
CACNB3-223ENST00000552480 HLA-DRB1P01911 266 aa10.08□□□□□ -0.8
CACNB3-223ENST00000552480 MBP02144 154 aa10.08□□□□□ -0.8
CACNB3-223ENST00000552480 FBP1P09467 338 aa10.08□□□□□ -0.8
CACNB3-223ENST00000552480 FHITP49789 147 aa10.08□□□□□ -0.8
CACNB3-223ENST00000552480 CYB5R2Q6BCY4 276 aa10.08□□□□□ -0.8
CACNB3-223ENST00000552480 TEPPQ6URK8 271 aa10.08□□□□□ -0.8
CACNB3-223ENST00000552480 SLC16A13Q7RTY0 426 aa10.08□□□□□ -0.8
CACNB3-223ENST00000552480 OR1P1Q8NH06 330 aa10.08□□□□□ -0.8
CACNB3-223ENST00000552480 ARPC1AQ92747 370 aa10.08□□□□□ -0.8
CACNB3-223ENST00000552480 SLC35E1Q96K37 410 aa10.08□□□□□ -0.8
CACNB3-223ENST00000552480 MGST2Q99735 147 aa10.08□□□□□ -0.8
CACNB3-223ENST00000552480 RASL11BQ9BPW5 248 aa10.08□□□□□ -0.8
CACNB3-223ENST00000552480 HRH4Q9H3N8 390 aa10.08□□□□□ -0.8
CACNB3-223ENST00000552480 KCNIP2Q9NS61 270 aa10.08□□□□□ -0.8
CACNB3-223ENST00000552480 LSM4Q9Y4Z0 139 aaKnown RBP10.08□□□□□ -0.8
CACNB3-223ENST00000552480 F11RQ9Y624 299 aaKnown RBP10.08□□□□□ -0.8
CACNB3-223ENST00000552480 USP9YO00507 2555 aaPredicted RBP10.08□□□□□ -0.8
CACNB3-223ENST00000552480 TENM4Q6N022 2769 aa10.08□□□□□ -0.8
CACNB3-223ENST00000552480 CORTO00230 105 aa10.07□□□□□ -0.8
CACNB3-223ENST00000552480 TSPAN9O75954 239 aa10.07□□□□□ -0.8
CACNB3-223ENST00000552480 TSPAN15O95858 294 aa10.07□□□□□ -0.8
CACNB3-223ENST00000552480 OPRK1P41145 380 aa10.07□□□□□ -0.8
CACNB3-223ENST00000552480 ELLP55199 621 aaPredicted RBP10.07□□□□□ -0.8
CACNB3-223ENST00000552480 CX3CL1P78423 397 aa10.07□□□□□ -0.8
CACNB3-223ENST00000552480 RAB31Q13636 194 aa10.07□□□□□ -0.8
CACNB3-223ENST00000552480 FFAR4Q5NUL3 377 aa10.07□□□□□ -0.8
CACNB3-223ENST00000552480 ETFRF1Q6IPR1 90 aa10.07□□□□□ -0.8
CACNB3-223ENST00000552480 ACSM6Q6P461 480 aa10.07□□□□□ -0.8
CACNB3-223ENST00000552480 TMEM144Q7Z5S9 345 aa10.07□□□□□ -0.8
CACNB3-223ENST00000552480 COMMD1Q8N668 190 aa10.07□□□□□ -0.8
CACNB3-223ENST00000552480 PIFOQ8TCI5 191 aa10.07□□□□□ -0.8
CACNB3-223ENST00000552480 RBM14Q96PK6 669 aaKnown RBP10.07□□□□□ -0.8
CACNB3-223ENST00000552480 FOXC2Q99958 501 aa10.07□□□□□ -0.8
CACNB3-223ENST00000552480 VSIRQ9H7M9 311 aa10.07□□□□□ -0.8
CACNB3-223ENST00000552480 MOB4Q9Y3A3 225 aa10.07□□□□□ -0.8
CACNB3-223ENST00000552480 GCN1Q92616 2671 aaKnown RBP10.07□□□□□ -0.8
CACNB3-223ENST00000552480 CR1P17927 2039 aa10.06□□□□□ -0.8
CACNB3-223ENST00000552480 IGHV7-81A0A0B4J1V7 117 aa10.06□□□□□ -0.8
CACNB3-223ENST00000552480 ANKRD34BA5PLL1 514 aa10.06□□□□□ -0.8
CACNB3-223ENST00000552480 FSHBP01225 129 aa10.06□□□□□ -0.8
CACNB3-223ENST00000552480 H2AFB1P0C5Y9 115 aa10.06□□□□□ -0.8
CACNB3-223ENST00000552480 APELAP0DMC3 54 aa10.06□□□□□ -0.8
CACNB3-223ENST00000552480 CTRB1P17538 263 aa10.06□□□□□ -0.8
CACNB3-223ENST00000552480 MFAP2P55001 183 aa10.06□□□□□ -0.8
CACNB3-223ENST00000552480 GAMTQ14353 236 aa10.06□□□□□ -0.8
CACNB3-223ENST00000552480 CTRB2Q6GPI1 263 aa10.06□□□□□ -0.8
CACNB3-223ENST00000552480 UQCC3Q6UW78 93 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms