RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 EGFEM1PQ0D2K5 195 aa14.2□□□□□ -0.14
PRPF40B-216ENST00000552301 ZNF429Q86V71 674 aa14.2□□□□□ -0.14
PRPF40B-216ENST00000552301 OR1L6Q8NGR2 347 aa14.2□□□□□ -0.14
PRPF40B-216ENST00000552301 TMEM230Q96A57 120 aa14.2□□□□□ -0.14
PRPF40B-216ENST00000552301 GALNT14Q96FL9 552 aa14.2□□□□□ -0.14
PRPF40B-216ENST00000552301 F11RQ9Y624 299 aaKnown RBP14.2□□□□□ -0.14
PRPF40B-216ENST00000552301 PIGBOS1A0A0B4J2F0 54 aa14.19□□□□□ -0.14
PRPF40B-216ENST00000552301 A6NHS1 94 aa14.19□□□□□ -0.14
PRPF40B-216ENST00000552301 IGHV3-23P01764 117 aa14.19□□□□□ -0.14
PRPF40B-216ENST00000552301 P0C879 139 aa14.19□□□□□ -0.14
PRPF40B-216ENST00000552301 SYNJ2BPP57105 145 aa14.19□□□□□ -0.14
PRPF40B-216ENST00000552301 ERHP84090 104 aaKnown RBP14.19□□□□□ -0.14
PRPF40B-216ENST00000552301 RBMS2Q15434 407 aaKnown RBP14.19□□□□□ -0.14
PRPF40B-216ENST00000552301 KLK9Q2XQG4 91 aa14.19□□□□□ -0.14
PRPF40B-216ENST00000552301 CNPY1Q3B7I2 92 aa14.19□□□□□ -0.14
PRPF40B-216ENST00000552301 SELENOHQ8IZQ5 122 aaKnown RBP14.19□□□□□ -0.14
PRPF40B-216ENST00000552301 LHFPL5Q8TAF8 219 aa14.19□□□□□ -0.14
PRPF40B-216ENST00000552301 MRAPQ8TCY5 172 aa14.19□□□□□ -0.14
PRPF40B-216ENST00000552301 IL22RA2Q969J5 263 aa14.19□□□□□ -0.14
PRPF40B-216ENST00000552301 ENY2Q9NPA8 101 aa14.19□□□□□ -0.14
PRPF40B-216ENST00000552301 KLK9Q9UKQ9 250 aa14.19□□□□□ -0.14
PRPF40B-216ENST00000552301 S4R3C0 116 aa14.19□□□□□ -0.14
PRPF40B-216ENST00000552301 TRBV7-1A0A0A6YYK4 115 aa14.18□□□□□ -0.14
PRPF40B-216ENST00000552301 A0A0B4J293 547 aa14.18□□□□□ -0.14
PRPF40B-216ENST00000552301 BMPR1BO00238 502 aa14.18□□□□□ -0.14
PRPF40B-216ENST00000552301 ST8SIA3O43173 380 aa14.18□□□□□ -0.14
PRPF40B-216ENST00000552301 IL7P13232 177 aa14.18□□□□□ -0.14
PRPF40B-216ENST00000552301 VAMP1P23763 118 aa14.18□□□□□ -0.14
PRPF40B-216ENST00000552301 HOXA1P49639 335 aaPredicted RBP14.18□□□□□ -0.14
PRPF40B-216ENST00000552301 KRTAP10-11P60412 298 aa14.18□□□□□ -0.14
PRPF40B-216ENST00000552301 TMEM187Q14656 261 aa14.18□□□□□ -0.14
PRPF40B-216ENST00000552301 SPINK9Q5DT21 86 aa14.18□□□□□ -0.14
PRPF40B-216ENST00000552301 ACSM6Q6P461 480 aa14.18□□□□□ -0.14
PRPF40B-216ENST00000552301 CLEC19AQ6UXS0 136 aa14.18□□□□□ -0.14
PRPF40B-216ENST00000552301 LGI3Q8N145 548 aa14.18□□□□□ -0.14
PRPF40B-216ENST00000552301 SDHCQ99643 169 aaPredicted RBP14.18□□□□□ -0.14
PRPF40B-216ENST00000552301 C7orf50Q9BRJ6 194 aaKnown RBP14.18□□□□□ -0.14
PRPF40B-216ENST00000552301 TMEM56-RWDD3S4R434 201 aa14.18□□□□□ -0.14
PRPF40B-216ENST00000552301 A0A0G2JRQ6 117 aa14.17□□□□□ -0.14
PRPF40B-216ENST00000552301 MFSD2BA6NFX1 497 aa14.17□□□□□ -0.14
PRPF40B-216ENST00000552301 GGCTO75223 188 aaKnown RBP14.17□□□□□ -0.14
PRPF40B-216ENST00000552301 ARL3P36405 182 aa14.17□□□□□ -0.14
PRPF40B-216ENST00000552301 KLF5Q13887 457 aaPredicted RBP14.17□□□□□ -0.14
PRPF40B-216ENST00000552301 TMEM128Q5BJH2 165 aa14.17□□□□□ -0.14
PRPF40B-216ENST00000552301 LINC00299Q6ZSB3 139 aa14.17□□□□□ -0.14
PRPF40B-216ENST00000552301 CENPSQ8N2Z9 138 aa14.17□□□□□ -0.14
PRPF40B-216ENST00000552301 OR2C3Q8N628 320 aa14.17□□□□□ -0.14
PRPF40B-216ENST00000552301 OR1P1Q8NH06 330 aa14.17□□□□□ -0.14
PRPF40B-216ENST00000552301 CCDC140Q96MF4 163 aa14.17□□□□□ -0.14
PRPF40B-216ENST00000552301 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.17□□□□□ -0.14
PRPF40B-216ENST00000552301 CACNG5Q9UF02 275 aa14.17□□□□□ -0.14
PRPF40B-216ENST00000552301 PPP5D1E7EU14 171 aa14.16□□□□□ -0.14
PRPF40B-216ENST00000552301 SNCAP37840 140 aa14.16□□□□□ -0.14
PRPF40B-216ENST00000552301 CCR6P51684 374 aa14.16□□□□□ -0.14
PRPF40B-216ENST00000552301 OR9G4Q8NGQ1 327 aa14.16□□□□□ -0.14
PRPF40B-216ENST00000552301 VN1R17PQ8TDU5 208 aa14.16□□□□□ -0.14
PRPF40B-216ENST00000552301 S100ZQ8WXG8 99 aa14.16□□□□□ -0.14
PRPF40B-216ENST00000552301 PRR13Q9NZ81 148 aa14.16□□□□□ -0.14
PRPF40B-216ENST00000552301 PEMTQ9UBM1 199 aa14.16□□□□□ -0.14
PRPF40B-216ENST00000552301 DMRT1Q9Y5R6 373 aa14.16□□□□□ -0.14
PRPF40B-216ENST00000552301 A0A0B4J2A0 478 aa14.15□□□□□ -0.14
PRPF40B-216ENST00000552301 LY86O95711 162 aa14.15□□□□□ -0.14
PRPF40B-216ENST00000552301 GPR183P32249 361 aa14.15□□□□□ -0.14
PRPF40B-216ENST00000552301 SUPT4H1P63272 117 aaKnown RBP14.15□□□□□ -0.14
PRPF40B-216ENST00000552301 ZNF114Q8NC26 417 aa14.15□□□□□ -0.14
PRPF40B-216ENST00000552301 ZNF502Q8TBZ5 544 aa14.15□□□□□ -0.14
PRPF40B-216ENST00000552301 GPR146Q96CH1 333 aa14.15□□□□□ -0.14
PRPF40B-216ENST00000552301 MISP3Q96FF7 219 aa14.15□□□□□ -0.14
PRPF40B-216ENST00000552301 BATF3Q9NR55 127 aa14.15□□□□□ -0.14
PRPF40B-216ENST00000552301 PTTG2Q9NZH5 202 aa14.15□□□□□ -0.14
PRPF40B-216ENST00000552301 SHPKQ9UHJ6 478 aa14.15□□□□□ -0.14
PRPF40B-216ENST00000552301 NDUFB6O95139 128 aa14.14□□□□□ -0.15
PRPF40B-216ENST00000552301 SULT1A3P0DMM9 295 aa14.14□□□□□ -0.15
PRPF40B-216ENST00000552301 SULT1A4P0DMN0 295 aa14.14□□□□□ -0.15
PRPF40B-216ENST00000552301 SUB1P53999 127 aaKnown RBP eCLIP14.14□□□□□ -0.15
PRPF40B-216ENST00000552301 MFAP2P55001 183 aa14.14□□□□□ -0.15
PRPF40B-216ENST00000552301 SPCS3P61009 180 aa14.14□□□□□ -0.15
PRPF40B-216ENST00000552301 CCDC32Q9BV29 185 aa14.14□□□□□ -0.15
PRPF40B-216ENST00000552301 C21orf62Q9NYP8 219 aa14.14□□□□□ -0.15
PRPF40B-216ENST00000552301 CACFD1Q9UGQ2 172 aa14.14□□□□□ -0.15
PRPF40B-216ENST00000552301 IGHV3-21A0A0B4J1V1 117 aa14.13□□□□□ -0.15
PRPF40B-216ENST00000552301 OR2C1O95371 312 aa14.13□□□□□ -0.15
PRPF40B-216ENST00000552301 HLA-AP01891 365 aaKnown RBP14.13□□□□□ -0.15
PRPF40B-216ENST00000552301 CLEC3BP05452 202 aa14.13□□□□□ -0.15
PRPF40B-216ENST00000552301 UBE2MP61081 183 aaKnown RBP14.13□□□□□ -0.15
PRPF40B-216ENST00000552301 DCTN2Q13561 401 aaKnown RBP14.13□□□□□ -0.15
PRPF40B-216ENST00000552301 PLET1Q6UQ28 207 aa14.13□□□□□ -0.15
PRPF40B-216ENST00000552301 Q6ZRM9 215 aa14.13□□□□□ -0.15
PRPF40B-216ENST00000552301 OR52E5Q8NH55 327 aa14.13□□□□□ -0.15
PRPF40B-216ENST00000552301 ZNF256Q9Y2P7 627 aaPredicted RBP14.13□□□□□ -0.15
PRPF40B-216ENST00000552301 PRKDCP78527 4128 aaKnown RBP14.12□□□□□ -0.15
PRPF40B-216ENST00000552301 DUXBA0A1W2PPF3 345 aa14.12□□□□□ -0.15
PRPF40B-216ENST00000552301 WI2-2373I1.2A0A1W2PRP0 233 aa14.12□□□□□ -0.15
PRPF40B-216ENST00000552301 CEBPZOSA8MTT3 80 aa14.12□□□□□ -0.15
PRPF40B-216ENST00000552301 INS-IGF2F8WCM5 200 aa14.12□□□□□ -0.15
PRPF40B-216ENST00000552301 SFT2D2O95562 160 aa14.12□□□□□ -0.15
PRPF40B-216ENST00000552301 PPP1R1AQ13522 171 aa14.12□□□□□ -0.15
PRPF40B-216ENST00000552301 FAM106AQ4KMX7 169 aa14.12□□□□□ -0.15
PRPF40B-216ENST00000552301 Q56UQ5 140 aa14.12□□□□□ -0.15
PRPF40B-216ENST00000552301 LYZL2Q7Z4W2 148 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms