RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 ZNF846Q147U1 533 aa12.59□□□□□ -0.39
GCN1-209ENST00000551920 NMSQ5H8A3 153 aa12.59□□□□□ -0.39
GCN1-209ENST00000551920 LYZL2Q7Z4W2 148 aa12.59□□□□□ -0.39
GCN1-209ENST00000551920 HSD17B13Q7Z5P4 300 aaPredicted RBP12.59□□□□□ -0.39
GCN1-209ENST00000551920 FAM219AQ8IW50 185 aa12.59□□□□□ -0.39
GCN1-209ENST00000551920 CCDC140Q96MF4 163 aa12.59□□□□□ -0.39
GCN1-209ENST00000551920 CACNG5Q9UF02 275 aa12.59□□□□□ -0.39
GCN1-209ENST00000551920 A0A0B4J2A0 478 aa12.58□□□□□ -0.4
GCN1-209ENST00000551920 MFSD2BA6NFX1 497 aa12.58□□□□□ -0.4
GCN1-209ENST00000551920 UPK1BO75841 260 aa12.58□□□□□ -0.4
GCN1-209ENST00000551920 HSPB1P04792 205 aaKnown RBP12.58□□□□□ -0.4
GCN1-209ENST00000551920 DEFA4P12838 97 aa12.58□□□□□ -0.4
GCN1-209ENST00000551920 ANXA7P20073 488 aaKnown RBP12.58□□□□□ -0.4
GCN1-209ENST00000551920 HOXD3P31249 432 aaPredicted RBP12.58□□□□□ -0.4
GCN1-209ENST00000551920 ATP5G2Q06055 141 aa12.58□□□□□ -0.4
GCN1-209ENST00000551920 BEAN1Q3B7T3 259 aa12.58□□□□□ -0.4
GCN1-209ENST00000551920 KPRPQ5T749 579 aaPredicted RBP12.58□□□□□ -0.4
GCN1-209ENST00000551920 DLX4Q92988 240 aaPredicted RBP12.58□□□□□ -0.4
GCN1-209ENST00000551920 RCC1LQ96I51 464 aaKnown RBP12.58□□□□□ -0.4
GCN1-209ENST00000551920 SHPKQ9UHJ6 478 aa12.58□□□□□ -0.4
GCN1-209ENST00000551920 F11RQ9Y624 299 aaKnown RBP12.58□□□□□ -0.4
GCN1-209ENST00000551920 SFT2D2O95562 160 aa12.57□□□□□ -0.4
GCN1-209ENST00000551920 DHFRP00374 187 aa12.57□□□□□ -0.4
GCN1-209ENST00000551920 IGHV3-23P01764 117 aa12.57□□□□□ -0.4
GCN1-209ENST00000551920 ANXA3P12429 323 aa12.57□□□□□ -0.4
GCN1-209ENST00000551920 MECP2P51608 486 aaKnown RBP12.57□□□□□ -0.4
GCN1-209ENST00000551920 SRPXP78539 464 aa12.57□□□□□ -0.4
GCN1-209ENST00000551920 C11orf87Q6NUJ2 197 aa12.57□□□□□ -0.4
GCN1-209ENST00000551920 LGI3Q8N145 548 aa12.57□□□□□ -0.4
GCN1-209ENST00000551920 OR2C3Q8N628 320 aa12.57□□□□□ -0.4
GCN1-209ENST00000551920 DCUN1D4Q92564 292 aa12.57□□□□□ -0.4
GCN1-209ENST00000551920 DPF1Q92782 380 aa12.57□□□□□ -0.4
GCN1-209ENST00000551920 C20orf85Q9H1P6 137 aa12.57□□□□□ -0.4
GCN1-209ENST00000551920 PLEKHA3Q9HB20 300 aa12.57□□□□□ -0.4
GCN1-209ENST00000551920 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.56□□□□□ -0.4
GCN1-209ENST00000551920 BMPR1BO00238 502 aa12.56□□□□□ -0.4
GCN1-209ENST00000551920 HIST1H1BP16401 226 aaKnown RBP12.56□□□□□ -0.4
GCN1-209ENST00000551920 UBE2MP61081 183 aaKnown RBP12.56□□□□□ -0.4
GCN1-209ENST00000551920 ASAH1Q13510 395 aa12.56□□□□□ -0.4
GCN1-209ENST00000551920 LRTM2Q8N967 370 aa12.56□□□□□ -0.4
GCN1-209ENST00000551920 ZNF114Q8NC26 417 aa12.56□□□□□ -0.4
GCN1-209ENST00000551920 RANGRFQ9HD47 186 aaPredicted RBP12.56□□□□□ -0.4
GCN1-209ENST00000551920 PEF1Q9UBV8 284 aaKnown RBP12.56□□□□□ -0.4
GCN1-209ENST00000551920 C9orf170A2RU37 121 aa12.55□□□□□ -0.4
GCN1-209ENST00000551920 INS-IGF2F8WCM5 200 aa12.55□□□□□ -0.4
GCN1-209ENST00000551920 NXPH3O95157 252 aa12.55□□□□□ -0.4
GCN1-209ENST00000551920 IFNA17P01571 189 aa12.55□□□□□ -0.4
GCN1-209ENST00000551920 HLA-AP01891 365 aaKnown RBP12.55□□□□□ -0.4
GCN1-209ENST00000551920 DHRS2Q13268 280 aa12.55□□□□□ -0.4
GCN1-209ENST00000551920 PDLIM3Q53GG5 364 aaPredicted RBP12.55□□□□□ -0.4
GCN1-209ENST00000551920 OR1P1Q8NH06 330 aa12.55□□□□□ -0.4
GCN1-209ENST00000551920 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.55□□□□□ -0.4
GCN1-209ENST00000551920 PPP5D1E7EU14 171 aa12.54□□□□□ -0.4
GCN1-209ENST00000551920 K7EIM0 57 aa12.54□□□□□ -0.4
GCN1-209ENST00000551920 TCRBP04435 133 aa12.54□□□□□ -0.4
GCN1-209ENST00000551920 OR4E1P0C645 316 aa12.54□□□□□ -0.4
GCN1-209ENST00000551920 SULT1A3P0DMM9 295 aa12.54□□□□□ -0.4
GCN1-209ENST00000551920 SULT1A4P0DMN0 295 aa12.54□□□□□ -0.4
GCN1-209ENST00000551920 ZNF502Q8TBZ5 544 aa12.54□□□□□ -0.4
GCN1-209ENST00000551920 NUDT15Q9NV35 164 aa12.54□□□□□ -0.4
GCN1-209ENST00000551920 TRAV6A0A075B6T7 132 aa12.53□□□□□ -0.4
GCN1-209ENST00000551920 IGHV3-21A0A0B4J1V1 117 aa12.53□□□□□ -0.4
GCN1-209ENST00000551920 DUXBA0A1W2PPF3 345 aa12.53□□□□□ -0.4
GCN1-209ENST00000551920 SEC14L6B5MCN3 397 aa12.53□□□□□ -0.4
GCN1-209ENST00000551920 F8W735 103 aaPredicted RBP12.53□□□□□ -0.4
GCN1-209ENST00000551920 OVOL1O14753 267 aa12.53□□□□□ -0.4
GCN1-209ENST00000551920 WIPF1O43516 503 aa12.53□□□□□ -0.4
GCN1-209ENST00000551920 DUS4LO95620 317 aaKnown RBP12.53□□□□□ -0.4
GCN1-209ENST00000551920 ZP3P21754 424 aa12.53□□□□□ -0.4
GCN1-209ENST00000551920 HOXA1P49639 335 aaPredicted RBP12.53□□□□□ -0.4
GCN1-209ENST00000551920 SPCS3P61009 180 aa12.53□□□□□ -0.4
GCN1-209ENST00000551920 KLF5Q13887 457 aaPredicted RBP12.53□□□□□ -0.4
GCN1-209ENST00000551920 SMCO1Q147U7 214 aa12.53□□□□□ -0.4
GCN1-209ENST00000551920 SLC25A24Q6NUK1 477 aa12.53□□□□□ -0.4
GCN1-209ENST00000551920 CLEC19AQ6UXS0 136 aa12.53□□□□□ -0.4
GCN1-209ENST00000551920 LYG2Q86SG7 212 aa12.53□□□□□ -0.4
GCN1-209ENST00000551920 OR52B4Q8NGK2 314 aa12.53□□□□□ -0.4
GCN1-209ENST00000551920 OR52E5Q8NH55 327 aa12.53□□□□□ -0.4
GCN1-209ENST00000551920 EEF1AKMT3Q96AZ1 226 aa12.53□□□□□ -0.4
GCN1-209ENST00000551920 PDCD10Q9BUL8 212 aa12.53□□□□□ -0.4
GCN1-209ENST00000551920 MCRIP2Q9BUT9 160 aaKnown RBP12.53□□□□□ -0.4
GCN1-209ENST00000551920 PRB2P02812 416 aaPredicted RBP12.52□□□□□ -0.41
GCN1-209ENST00000551920 RNASE2P10153 161 aaKnown RBP12.52□□□□□ -0.41
GCN1-209ENST00000551920 SYNJ2BPP57105 145 aa12.52□□□□□ -0.41
GCN1-209ENST00000551920 KRTAP10-11P60412 298 aa12.52□□□□□ -0.41
GCN1-209ENST00000551920 DEFA6Q01524 100 aa12.52□□□□□ -0.41
GCN1-209ENST00000551920 BSXQ3C1V8 233 aa12.52□□□□□ -0.41
GCN1-209ENST00000551920 PVRIGQ6DKI7 326 aa12.52□□□□□ -0.41
GCN1-209ENST00000551920 CXorf58Q96LI9 332 aa12.52□□□□□ -0.41
GCN1-209ENST00000551920 PRKDCP78527 4128 aaKnown RBP12.51□□□□□ -0.41
GCN1-209ENST00000551920 A0A1B0GU03 582 aa12.51□□□□□ -0.41
GCN1-209ENST00000551920 I3L2K1 104 aa12.51□□□□□ -0.41
GCN1-209ENST00000551920 PITX3O75364 302 aa12.51□□□□□ -0.41
GCN1-209ENST00000551920 ADAP1O75689 374 aa12.51□□□□□ -0.41
GCN1-209ENST00000551920 HOXB5P09067 269 aa12.51□□□□□ -0.41
GCN1-209ENST00000551920 GPR183P32249 361 aa12.51□□□□□ -0.41
GCN1-209ENST00000551920 ERHP84090 104 aaKnown RBP12.51□□□□□ -0.41
GCN1-209ENST00000551920 TNFRSF9Q07011 255 aa12.51□□□□□ -0.41
GCN1-209ENST00000551920 EGFEM1PQ0D2K5 195 aa12.51□□□□□ -0.41
GCN1-209ENST00000551920 C4orf46Q504U0 113 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms