RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 IGLV11-55A0A075B6I3 123 aa13.35□□□□□ -0.27
CDK4-208ENST00000551706 A0A0B4J293 547 aa13.35□□□□□ -0.27
CDK4-208ENST00000551706 CCR6P51684 374 aa13.35□□□□□ -0.27
CDK4-208ENST00000551706 SUPT4H1P63272 117 aaKnown RBP13.35□□□□□ -0.27
CDK4-208ENST00000551706 PRCDQ00LT1 54 aa13.35□□□□□ -0.27
CDK4-208ENST00000551706 WT1-ASQ06250 92 aa13.35□□□□□ -0.27
CDK4-208ENST00000551706 EXOSC2Q13868 293 aaKnown RBP13.35□□□□□ -0.27
CDK4-208ENST00000551706 LGI3Q8N145 548 aa13.35□□□□□ -0.27
CDK4-208ENST00000551706 CENPSQ8N2Z9 138 aa13.35□□□□□ -0.27
CDK4-208ENST00000551706 LHFPL5Q8TAF8 219 aa13.35□□□□□ -0.27
CDK4-208ENST00000551706 WDR12Q9GZL7 423 aaKnown RBP13.35□□□□□ -0.27
CDK4-208ENST00000551706 CACFD1Q9UGQ2 172 aa13.35□□□□□ -0.27
CDK4-208ENST00000551706 NDUFB6O95139 128 aa13.34□□□□□ -0.27
CDK4-208ENST00000551706 IFNA17P01571 189 aa13.34□□□□□ -0.27
CDK4-208ENST00000551706 UBE2MP61081 183 aaKnown RBP13.34□□□□□ -0.27
CDK4-208ENST00000551706 DEFA5Q01523 94 aa13.34□□□□□ -0.27
CDK4-208ENST00000551706 IZUMO4Q1ZYL8 232 aa13.34□□□□□ -0.27
CDK4-208ENST00000551706 C19orf35Q6ZS72 473 aa13.34□□□□□ -0.27
CDK4-208ENST00000551706 CXorf58Q96LI9 332 aa13.34□□□□□ -0.27
CDK4-208ENST00000551706 PLEKHA3Q9HB20 300 aa13.34□□□□□ -0.27
CDK4-208ENST00000551706 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.34□□□□□ -0.27
CDK4-208ENST00000551706 F11RQ9Y624 299 aaKnown RBP13.34□□□□□ -0.27
CDK4-208ENST00000551706 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.33□□□□□ -0.28
CDK4-208ENST00000551706 A0A0B4J2A0 478 aa13.33□□□□□ -0.28
CDK4-208ENST00000551706 A0A0G2JRQ6 117 aa13.33□□□□□ -0.28
CDK4-208ENST00000551706 ANKRD34BA5PLL1 514 aa13.33□□□□□ -0.28
CDK4-208ENST00000551706 OVOL1O14753 267 aa13.33□□□□□ -0.28
CDK4-208ENST00000551706 ST8SIA3O43173 380 aa13.33□□□□□ -0.28
CDK4-208ENST00000551706 VAMP1P23763 118 aa13.33□□□□□ -0.28
CDK4-208ENST00000551706 HOXD3P31249 432 aaPredicted RBP13.33□□□□□ -0.28
CDK4-208ENST00000551706 SLURP1P55000 103 aa13.33□□□□□ -0.28
CDK4-208ENST00000551706 ERHP84090 104 aaKnown RBP13.33□□□□□ -0.28
CDK4-208ENST00000551706 ZNF846Q147U1 533 aa13.33□□□□□ -0.28
CDK4-208ENST00000551706 C9orf66Q5T8R8 295 aa13.33□□□□□ -0.28
CDK4-208ENST00000551706 C11orf87Q6NUJ2 197 aa13.33□□□□□ -0.28
CDK4-208ENST00000551706 SLC35G3Q8N808 338 aa13.33□□□□□ -0.28
CDK4-208ENST00000551706 DCUN1D4Q92564 292 aa13.33□□□□□ -0.28
CDK4-208ENST00000551706 EEF1AKMT3Q96AZ1 226 aa13.33□□□□□ -0.28
CDK4-208ENST00000551706 AURKAIP1Q9NWT8 199 aaPredicted RBP13.33□□□□□ -0.28
CDK4-208ENST00000551706 ZMAT5Q9UDW3 170 aaKnown RBP13.33□□□□□ -0.28
CDK4-208ENST00000551706 SHPKQ9UHJ6 478 aa13.33□□□□□ -0.28
CDK4-208ENST00000551706 TRBV7-1A0A0A6YYK4 115 aa13.32□□□□□ -0.28
CDK4-208ENST00000551706 DUXBA0A1W2PPF3 345 aa13.32□□□□□ -0.28
CDK4-208ENST00000551706 SEC14L6B5MCN3 397 aa13.32□□□□□ -0.28
CDK4-208ENST00000551706 NDUFB8O95169 186 aa13.32□□□□□ -0.28
CDK4-208ENST00000551706 AARDQ4LEZ3 155 aa13.32□□□□□ -0.28
CDK4-208ENST00000551706 SLC25A24Q6NUK1 477 aa13.32□□□□□ -0.28
CDK4-208ENST00000551706 OR2C3Q8N628 320 aa13.32□□□□□ -0.28
CDK4-208ENST00000551706 ZNF114Q8NC26 417 aa13.32□□□□□ -0.28
CDK4-208ENST00000551706 OR1P1Q8NH06 330 aa13.32□□□□□ -0.28
CDK4-208ENST00000551706 OR52E5Q8NH55 327 aa13.32□□□□□ -0.28
CDK4-208ENST00000551706 DLX4Q92988 240 aaPredicted RBP13.32□□□□□ -0.28
CDK4-208ENST00000551706 INS-IGF2F8WCM5 200 aa13.31□□□□□ -0.28
CDK4-208ENST00000551706 PLA2G10O15496 165 aa13.31□□□□□ -0.28
CDK4-208ENST00000551706 LYRM1O43325 122 aa13.31□□□□□ -0.28
CDK4-208ENST00000551706 BTCP35070 178 aa13.31□□□□□ -0.28
CDK4-208ENST00000551706 INSL3P51460 131 aa13.31□□□□□ -0.28
CDK4-208ENST00000551706 TATDN3Q17R31 274 aa13.31□□□□□ -0.28
CDK4-208ENST00000551706 Q6ZRM9 215 aa13.31□□□□□ -0.28
CDK4-208ENST00000551706 VN1R17PQ8TDU5 208 aa13.31□□□□□ -0.28
CDK4-208ENST00000551706 GPR146Q96CH1 333 aa13.31□□□□□ -0.28
CDK4-208ENST00000551706 CACNG5Q9UF02 275 aa13.31□□□□□ -0.28
CDK4-208ENST00000551706 DMRT1Q9Y5R6 373 aa13.31□□□□□ -0.28
CDK4-208ENST00000551706 NOTCH3Q9UM47 2321 aa13.3□□□□□ -0.28
CDK4-208ENST00000551706 SFT2D2O95562 160 aa13.3□□□□□ -0.28
CDK4-208ENST00000551706 TRBV12-3P01733 135 aa13.3□□□□□ -0.28
CDK4-208ENST00000551706 SULT1A3P0DMM9 295 aa13.3□□□□□ -0.28
CDK4-208ENST00000551706 SULT1A4P0DMN0 295 aa13.3□□□□□ -0.28
CDK4-208ENST00000551706 SPCS3P61009 180 aa13.3□□□□□ -0.28
CDK4-208ENST00000551706 PPP1R1AQ13522 171 aa13.3□□□□□ -0.28
CDK4-208ENST00000551706 RPEL1Q2QD12 228 aa13.3□□□□□ -0.28
CDK4-208ENST00000551706 LYZL2Q7Z4W2 148 aa13.3□□□□□ -0.28
CDK4-208ENST00000551706 LRTM2Q8N967 370 aa13.3□□□□□ -0.28
CDK4-208ENST00000551706 ENY2Q9NPA8 101 aa13.3□□□□□ -0.28
CDK4-208ENST00000551706 PRR13Q9NZ81 148 aa13.3□□□□□ -0.28
CDK4-208ENST00000551706 BIRC6Q9NR09 4857 aa13.3□□□□□ -0.28
CDK4-208ENST00000551706 SNCAP37840 140 aa13.29□□□□□ -0.28
CDK4-208ENST00000551706 HOXA1P49639 335 aaPredicted RBP13.29□□□□□ -0.28
CDK4-208ENST00000551706 EGFEM1PQ0D2K5 195 aa13.29□□□□□ -0.28
CDK4-208ENST00000551706 KLF5Q13887 457 aaPredicted RBP13.29□□□□□ -0.28
CDK4-208ENST00000551706 NMSQ5H8A3 153 aa13.29□□□□□ -0.28
CDK4-208ENST00000551706 WWC2-AS2Q96NR7 200 aa13.29□□□□□ -0.28
CDK4-208ENST00000551706 ELOVL1Q9BW60 279 aa13.29□□□□□ -0.28
CDK4-208ENST00000551706 MFSD2BA6NFX1 497 aa13.28□□□□□ -0.28
CDK4-208ENST00000551706 BMPR1BO00238 502 aa13.28□□□□□ -0.28
CDK4-208ENST00000551706 GGCTO75223 188 aaKnown RBP13.28□□□□□ -0.28
CDK4-208ENST00000551706 SUB1P53999 127 aaKnown RBP eCLIP13.28□□□□□ -0.28
CDK4-208ENST00000551706 SMCO1Q147U7 214 aa13.28□□□□□ -0.28
CDK4-208ENST00000551706 SPINK9Q5DT21 86 aa13.28□□□□□ -0.28
CDK4-208ENST00000551706 MZT2BQ6NZ67 158 aa13.28□□□□□ -0.28
CDK4-208ENST00000551706 CCDC140Q96MF4 163 aa13.28□□□□□ -0.28
CDK4-208ENST00000551706 ATP6V0BQ99437 205 aa13.28□□□□□ -0.28
CDK4-208ENST00000551706 FLVCR2Q9UPI3 526 aa13.28□□□□□ -0.28
CDK4-208ENST00000551706 TMED3Q9Y3Q3 217 aa13.28□□□□□ -0.28
CDK4-208ENST00000551706 EPPK1P58107 5090 aaKnown RBP13.27□□□□□ -0.29
CDK4-208ENST00000551706 A0A1B0GU03 582 aa13.27□□□□□ -0.29
CDK4-208ENST00000551706 C9orf170A2RU37 121 aa13.27□□□□□ -0.29
CDK4-208ENST00000551706 UPK1BO75841 260 aa13.27□□□□□ -0.29
CDK4-208ENST00000551706 HLA-AP01891 365 aaKnown RBP13.27□□□□□ -0.29
CDK4-208ENST00000551706 MFAP2P55001 183 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 191.4 ms