RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 CD81P60033 236 aa9.24□□□□□ -0.93
RAB5C-208ENST00000551338 B2MP61769 119 aa9.24□□□□□ -0.93
RAB5C-208ENST00000551338 PRSS8Q16651 343 aa9.24□□□□□ -0.93
RAB5C-208ENST00000551338 RBMS3Q6XE24 437 aaKnown RBP9.24□□□□□ -0.93
RAB5C-208ENST00000551338 SLC16A13Q7RTY0 426 aa9.24□□□□□ -0.93
RAB5C-208ENST00000551338 MMD2Q8IY49 270 aa9.24□□□□□ -0.93
RAB5C-208ENST00000551338 KIR3DL3Q8N743 410 aa9.24□□□□□ -0.93
RAB5C-208ENST00000551338 STPG3Q8N7X2 389 aa9.24□□□□□ -0.93
RAB5C-208ENST00000551338 C17orf50Q8WW18 174 aa9.24□□□□□ -0.93
RAB5C-208ENST00000551338 IGFBPL1Q8WX77 278 aa9.24□□□□□ -0.93
RAB5C-208ENST00000551338 CFHR4Q92496 578 aa9.24□□□□□ -0.93
RAB5C-208ENST00000551338 TVP23CQ96ET8 276 aa9.24□□□□□ -0.93
RAB5C-208ENST00000551338 SLC45A2Q9UMX9 530 aa9.24□□□□□ -0.93
RAB5C-208ENST00000551338 NCOR2Q9Y618 2525 aa9.23□□□□□ -0.93
RAB5C-208ENST00000551338 IGKV1OR2-108A0A075B7D4 117 aa9.23□□□□□ -0.93
RAB5C-208ENST00000551338 COLCA2A8K830 154 aa9.23□□□□□ -0.93
RAB5C-208ENST00000551338 VENTXO95231 258 aa9.23□□□□□ -0.93
RAB5C-208ENST00000551338 STAG3L2P0CL84 134 aa9.23□□□□□ -0.93
RAB5C-208ENST00000551338 STAG3L3P0CL85 134 aa9.23□□□□□ -0.93
RAB5C-208ENST00000551338 HOXB4P17483 251 aaPredicted RBP9.23□□□□□ -0.93
RAB5C-208ENST00000551338 ZFP36P26651 326 aaKnown RBP9.23□□□□□ -0.93
RAB5C-208ENST00000551338 HTR1DP28221 377 aa9.23□□□□□ -0.93
RAB5C-208ENST00000551338 MAS1LP35410 378 aa9.23□□□□□ -0.93
RAB5C-208ENST00000551338 TAGLN2P37802 199 aaKnown RBP9.23□□□□□ -0.93
RAB5C-208ENST00000551338 MEF2BQ02080 365 aaPredicted RBP9.23□□□□□ -0.93
RAB5C-208ENST00000551338 PAX2Q02962 417 aa9.23□□□□□ -0.93
RAB5C-208ENST00000551338 GAMTQ14353 236 aa9.23□□□□□ -0.93
RAB5C-208ENST00000551338 TNXAQ16473 311 aa9.23□□□□□ -0.93
RAB5C-208ENST00000551338 MLANAQ16655 118 aa9.23□□□□□ -0.93
RAB5C-208ENST00000551338 PVRIGQ6DKI7 326 aa9.23□□□□□ -0.93
RAB5C-208ENST00000551338 SLC35E3Q7Z769 313 aa9.23□□□□□ -0.93
RAB5C-208ENST00000551338 LHFPL4Q7Z7J7 247 aa9.23□□□□□ -0.93
RAB5C-208ENST00000551338 C15orf54Q8N8G6 183 aa9.23□□□□□ -0.93
RAB5C-208ENST00000551338 SIRPDQ9H106 197 aa9.23□□□□□ -0.93
RAB5C-208ENST00000551338 FBXL15Q9H469 300 aa9.23□□□□□ -0.93
RAB5C-208ENST00000551338 FNDC4Q9H6D8 234 aaPredicted RBP9.23□□□□□ -0.93
RAB5C-208ENST00000551338 METTL1Q9UBP6 276 aaKnown RBP9.23□□□□□ -0.93
RAB5C-208ENST00000551338 SIGLEC9Q9Y336 463 aa9.23□□□□□ -0.93
RAB5C-208ENST00000551338 NBASA2RRP1 2371 aa9.23□□□□□ -0.93
RAB5C-208ENST00000551338 NAV3Q8IVL0 2385 aa9.22□□□□□ -0.93
RAB5C-208ENST00000551338 A0A1W2PPV4 95 aa9.22□□□□□ -0.93
RAB5C-208ENST00000551338 TIMM23O14925 209 aa9.22□□□□□ -0.93
RAB5C-208ENST00000551338 PAGE4O60829 102 aa9.22□□□□□ -0.93
RAB5C-208ENST00000551338 GOSR1O95249 250 aa9.22□□□□□ -0.93
RAB5C-208ENST00000551338 REG1AP05451 166 aa9.22□□□□□ -0.93
RAB5C-208ENST00000551338 RNF224P0DH78 156 aa9.22□□□□□ -0.93
RAB5C-208ENST00000551338 OR10J1P30954 320 aa9.22□□□□□ -0.93
RAB5C-208ENST00000551338 GPX4P36969 197 aaPredicted RBP9.22□□□□□ -0.93
RAB5C-208ENST00000551338 PSMB3P49720 205 aa9.22□□□□□ -0.93
RAB5C-208ENST00000551338 SSBP2P81877 361 aaPredicted RBP9.22□□□□□ -0.93
RAB5C-208ENST00000551338 RAB31Q13636 194 aa9.22□□□□□ -0.93
RAB5C-208ENST00000551338 HABP2Q14520 560 aaPredicted RBP9.22□□□□□ -0.93
RAB5C-208ENST00000551338 SPATA31B1PQ5VZV4 182 aa9.22□□□□□ -0.93
RAB5C-208ENST00000551338 VMO1Q7Z5L0 202 aa9.22□□□□□ -0.93
RAB5C-208ENST00000551338 IQCF2Q8IXL9 164 aa9.22□□□□□ -0.93
RAB5C-208ENST00000551338 ZNF114Q8NC26 417 aa9.22□□□□□ -0.93
RAB5C-208ENST00000551338 RNASEH2CQ8TDP1 164 aaKnown RBP9.22□□□□□ -0.93
RAB5C-208ENST00000551338 CACNG8Q8WXS5 425 aa9.22□□□□□ -0.93
RAB5C-208ENST00000551338 SLC35E1Q96K37 410 aa9.22□□□□□ -0.93
RAB5C-208ENST00000551338 RNF5Q99942 180 aa9.22□□□□□ -0.93
RAB5C-208ENST00000551338 NIPSNAP3BQ9BS92 247 aa9.22□□□□□ -0.93
RAB5C-208ENST00000551338 TUBA4BQ9H853 241 aa9.22□□□□□ -0.93
RAB5C-208ENST00000551338 DPM3Q9P2X0 92 aa9.22□□□□□ -0.93
RAB5C-208ENST00000551338 IGHV2-70DA0A0C4DH43 119 aa9.21□□□□□ -0.94
RAB5C-208ENST00000551338 TEX22C9J3V5 150 aa9.21□□□□□ -0.94
RAB5C-208ENST00000551338 TMEM250H0YL14 139 aa9.21□□□□□ -0.94
RAB5C-208ENST00000551338 ARL14EPLP0DKL9 152 aa9.21□□□□□ -0.94
RAB5C-208ENST00000551338 COMPP49747 757 aaPredicted RBP9.21□□□□□ -0.94
RAB5C-208ENST00000551338 MFAP2P55001 183 aa9.21□□□□□ -0.94
RAB5C-208ENST00000551338 LMO4P61968 165 aa9.21□□□□□ -0.94
RAB5C-208ENST00000551338 FBLN7Q53RD9 439 aa9.21□□□□□ -0.94
RAB5C-208ENST00000551338 C1orf122Q6ZSJ8 110 aa9.21□□□□□ -0.94
RAB5C-208ENST00000551338 ABHD5Q8WTS1 349 aa9.21□□□□□ -0.94
RAB5C-208ENST00000551338 HIST1H2BAQ96A08 127 aa9.21□□□□□ -0.94
RAB5C-208ENST00000551338 YPEL4Q96NS1 127 aa9.21□□□□□ -0.94
RAB5C-208ENST00000551338 BPESC1Q9GZL8 116 aa9.21□□□□□ -0.94
RAB5C-208ENST00000551338 SDF2L1Q9HCN8 221 aa9.21□□□□□ -0.94
RAB5C-208ENST00000551338 MRPL36Q9P0J6 103 aaKnown RBP9.21□□□□□ -0.94
RAB5C-208ENST00000551338 CACNA1AO00555 2505 aa9.2□□□□□ -0.94
RAB5C-208ENST00000551338 A0A087WWC5 75 aa9.2□□□□□ -0.94
RAB5C-208ENST00000551338 A0A1W2PRD5 423 aa9.2□□□□□ -0.94
RAB5C-208ENST00000551338 A0A1W2PRF3 423 aa9.2□□□□□ -0.94
RAB5C-208ENST00000551338 A0A1W2PRM7 423 aa9.2□□□□□ -0.94
RAB5C-208ENST00000551338 NDUFA3O95167 84 aa9.2□□□□□ -0.94
RAB5C-208ENST00000551338 CXorf1O96002 111 aa9.2□□□□□ -0.94
RAB5C-208ENST00000551338 IGHV4-39P01824 125 aa9.2□□□□□ -0.94
RAB5C-208ENST00000551338 AREGP15514 252 aa9.2□□□□□ -0.94
RAB5C-208ENST00000551338 CEACAM3P40198 252 aa9.2□□□□□ -0.94
RAB5C-208ENST00000551338 ATP5G3P48201 142 aa9.2□□□□□ -0.94
RAB5C-208ENST00000551338 SUB1P53999 127 aaKnown RBP eCLIP9.2□□□□□ -0.94
RAB5C-208ENST00000551338 RHOBP62745 196 aa9.2□□□□□ -0.94
RAB5C-208ENST00000551338 SPNS3Q6ZMD2 512 aa9.2□□□□□ -0.94
RAB5C-208ENST00000551338 C19orf35Q6ZS72 473 aa9.2□□□□□ -0.94
RAB5C-208ENST00000551338 CYP2G1PQ6ZSU1 146 aa9.2□□□□□ -0.94
RAB5C-208ENST00000551338 PPP1R27Q86WC6 154 aa9.2□□□□□ -0.94
RAB5C-208ENST00000551338 DYNAPQ8N1N2 210 aa9.2□□□□□ -0.94
RAB5C-208ENST00000551338 THAP8Q8NA92 274 aa9.2□□□□□ -0.94
RAB5C-208ENST00000551338 OR4F5Q8NH21 305 aa9.2□□□□□ -0.94
RAB5C-208ENST00000551338 OR2T6Q8NHC8 308 aa9.2□□□□□ -0.94
RAB5C-208ENST00000551338 ISOC2Q96AB3 205 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms