RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 KIR2DS1Q14954 304 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 IZUMO4Q1ZYL8 232 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 POM121L1PQ3SYA9 428 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 C19orf54Q5BKX5 351 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 C10orf128Q5T292 105 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 Q6P435 159 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 ZNF841Q6ZN19 808 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 BPIFA4PQ86YQ2 179 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 SFTPA2Q8IWL1 248 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 SFTPA1Q8IWL2 248 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 TMEM251Q8N6I4 163 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 GATD1Q8NB37 220 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 OR10D3Q8NH80 312 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 LMX1AQ8TE12 382 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 PIGTQ969N2 578 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 RITA1Q96K30 269 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 BMFQ96LC9 184 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 C19orf24Q9BVV8 132 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 GGTLC1Q9BX51 225 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 TM2D2Q9BX73 214 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 NXF5Q9H1B4 397 aaKnown RBP4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 IL23AQ9NPF7 189 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 HCFC1R1Q9NWW0 138 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 OR1A1Q9P1Q5 309 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 HIGD1BQ9P298 99 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 CLCF1Q9UBD9 225 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 LSM4Q9Y4Z0 139 aaKnown RBP4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 INSIG2Q9Y5U4 225 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 SCN3AQ9NY46 2000 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 ALPK2Q86TB3 2170 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 A0A087WX48 190 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 C15orf62A8K5M9 175 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 C2CD4DB7Z1M9 353 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 TNFSF12O43508 249 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 SYNGR1O43759 233 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 ANGPTL7O43827 346 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 RBMXL2O75526 392 aaKnown RBP4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 CLDN14O95500 239 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 CLDN1O95832 211 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 ADH4P08319 380 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 CT45A6P0DMU7 189 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 CT45A5P0DMU8 189 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 CT45A7P0DMV0 189 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 SPTBP11277 2137 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 USF1P22415 310 aaPredicted RBP4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 SUMO3P55854 103 aaPredicted RBP4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 RPS18P62269 152 aaKnown RBP4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 SRSF1Q07955 248 aaKnown RBP eCLIP4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 WFDC2Q14508 124 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 ZNF146Q15072 292 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 ZNF77Q15935 545 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 CCL14Q16627 93 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 PIGYQ3MUY2 71 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 CT45A1Q5HYN5 189 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 DMRTC1Q5HYR2 192 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 GCSAMLQ5JQS6 135 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 PSMG4Q5JS54 123 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 SPANXN5Q5MJ07 72 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 LY6G5CQ5SRR4 150 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 TMEM240Q5SV17 173 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 LILRA6Q6PI73 481 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 DHRS13Q6UX07 377 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 MOB1BQ7L9L4 216 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 PRR22Q8IZ63 422 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 SPEM1Q8N4L4 309 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 OR10X1Q8NGY0 326 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 OR2T6Q8NHC8 308 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 CT45A3Q8NHU0 189 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 Q8TCH9 128 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 NABP1Q96AH0 204 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 CLDN23Q96B33 292 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 CITED1Q99966 193 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 SPXQ9BT56 116 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 WDR54Q9H977 334 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 PRTFDC1Q9NRG1 225 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 SPANXA1Q9NS26 97 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 HIF1ANQ9NWT6 349 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 MED29Q9NX70 200 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 IDI2-AS1Q9NZ38 188 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 C19orf25Q9UFG5 118 aaPredicted RBP4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 RABAC1Q9UI14 185 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 PIGLQ9Y2B2 252 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 MPC1Q9Y5U8 109 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 R4GN57 208 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 TMEM131Q92545 1883 aa4.32□□□□□ -1.72
LSM3P2-201ENST00000551246 CACNA1CQ13936 2221 aa4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 FREM3P0C091 2139 aa4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 IGKV3D-11A0A0A0MRZ8 115 aa4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 IGLV3-32A0A0A0MS00 114 aa4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 A0A1B0GWB2 263 aa4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 A0A1W2PRX2 142 aa4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 SH2D7A6NKC9 451 aaPredicted RBP4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 FAM90A9PA6NNJ1 464 aa4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 EFNA2O43921 213 aa4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 NEURL1O76050 574 aa4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 NXPH3O95157 252 aa4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 ARL14EPLP0DKL9 152 aa4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 IL12BP29460 328 aa4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 RPL32P62910 135 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms