RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 TMEM14BQ9NUH8 114 aa10.36□□□□□ -0.75
NUP188-211ENST00000550219 COA4Q9NYJ1 87 aa10.36□□□□□ -0.75
NUP188-211ENST00000550219 C15orf61A6NNL5 157 aa10.35□□□□□ -0.75
NUP188-211ENST00000550219 LINC01619G3V211 115 aa10.35□□□□□ -0.75
NUP188-211ENST00000550219 SNAPC5O75971 98 aa10.35□□□□□ -0.75
NUP188-211ENST00000550219 IFNA21P01568 189 aa10.35□□□□□ -0.75
NUP188-211ENST00000550219 LGALS1P09382 135 aaKnown RBP10.35□□□□□ -0.75
NUP188-211ENST00000550219 INSL3P51460 131 aa10.35□□□□□ -0.75
NUP188-211ENST00000550219 TPPP2P59282 170 aa10.35□□□□□ -0.75
NUP188-211ENST00000550219 RPL8P62917 257 aaKnown RBP10.35□□□□□ -0.75
NUP188-211ENST00000550219 UNQ5815/PRO19632Q6UWF5 114 aa10.35□□□□□ -0.75
NUP188-211ENST00000550219 ZNF429Q86V71 674 aa10.35□□□□□ -0.75
NUP188-211ENST00000550219 ARPC1AQ92747 370 aa10.35□□□□□ -0.75
NUP188-211ENST00000550219 DLX4Q92988 240 aaPredicted RBP10.35□□□□□ -0.75
NUP188-211ENST00000550219 MS4A10Q96PG2 267 aa10.35□□□□□ -0.75
NUP188-211ENST00000550219 CACNG5Q9UF02 275 aa10.35□□□□□ -0.75
NUP188-211ENST00000550219 PRNDQ9UKY0 176 aa10.35□□□□□ -0.75
NUP188-211ENST00000550219 SMAD5-AS1Q9Y6J3 95 aa10.35□□□□□ -0.75
NUP188-211ENST00000550219 TNCP24821 2201 aa10.34□□□□□ -0.75
NUP188-211ENST00000550219 MPTX1A8MV57 137 aa10.34□□□□□ -0.75
NUP188-211ENST00000550219 CA2P00918 260 aa10.34□□□□□ -0.75
NUP188-211ENST00000550219 SULT1A3P0DMM9 295 aa10.34□□□□□ -0.75
NUP188-211ENST00000550219 SULT1A4P0DMN0 295 aa10.34□□□□□ -0.75
NUP188-211ENST00000550219 SMCO1Q147U7 214 aa10.34□□□□□ -0.75
NUP188-211ENST00000550219 C19orf54Q5BKX5 351 aa10.34□□□□□ -0.75
NUP188-211ENST00000550219 UXS1Q8NBZ7 420 aa10.34□□□□□ -0.75
NUP188-211ENST00000550219 OR4A16Q8NH70 328 aa10.34□□□□□ -0.75
NUP188-211ENST00000550219 RNASE11Q8TAA1 199 aaKnown RBP10.34□□□□□ -0.75
NUP188-211ENST00000550219 GRPEL2Q8TAA5 225 aa10.34□□□□□ -0.75
NUP188-211ENST00000550219 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.34□□□□□ -0.75
NUP188-211ENST00000550219 FKBP11Q9NYL4 201 aa10.34□□□□□ -0.75
NUP188-211ENST00000550219 ZNF257Q9Y2Q1 563 aa10.34□□□□□ -0.75
NUP188-211ENST00000550219 NSG2Q9Y328 171 aa10.34□□□□□ -0.75
NUP188-211ENST00000550219 SSNA1O43805 119 aa10.33□□□□□ -0.76
NUP188-211ENST00000550219 EGR2P11161 476 aaPredicted RBP10.33□□□□□ -0.76
NUP188-211ENST00000550219 CRIP2P52943 208 aaPredicted RBP10.33□□□□□ -0.76
NUP188-211ENST00000550219 TMEM267Q0VDI3 215 aaPredicted RBP10.33□□□□□ -0.76
NUP188-211ENST00000550219 HAPLN4Q86UW8 402 aa10.33□□□□□ -0.76
NUP188-211ENST00000550219 LFNGQ8NES3 379 aa10.33□□□□□ -0.76
NUP188-211ENST00000550219 OR5B3Q8NH48 314 aa10.33□□□□□ -0.76
NUP188-211ENST00000550219 OR52E5Q8NH55 327 aa10.33□□□□□ -0.76
NUP188-211ENST00000550219 OR10C1Q96KK4 312 aa10.33□□□□□ -0.76
NUP188-211ENST00000550219 SPIN2AQ99865 258 aa10.33□□□□□ -0.76
NUP188-211ENST00000550219 SPIN2BQ9BPZ2 258 aa10.33□□□□□ -0.76
NUP188-211ENST00000550219 CACFD1Q9UGQ2 172 aa10.33□□□□□ -0.76
NUP188-211ENST00000550219 KMT2CQ8NEZ4 4911 aaKnown RBP10.32□□□□□ -0.76
NUP188-211ENST00000550219 TEX50A0A1B0GTY4 177 aa10.32□□□□□ -0.76
NUP188-211ENST00000550219 A0A1B0GW64 132 aa10.32□□□□□ -0.76
NUP188-211ENST00000550219 CGB1A6NKQ9 187 aa10.32□□□□□ -0.76
NUP188-211ENST00000550219 E7EUB6 86 aa10.32□□□□□ -0.76
NUP188-211ENST00000550219 CCSO14618 274 aa10.32□□□□□ -0.76
NUP188-211ENST00000550219 ST8SIA3O43173 380 aa10.32□□□□□ -0.76
NUP188-211ENST00000550219 GP9P14770 177 aa10.32□□□□□ -0.76
NUP188-211ENST00000550219 MYOD1P15172 320 aa10.32□□□□□ -0.76
NUP188-211ENST00000550219 OR2B8PP59922 312 aa10.32□□□□□ -0.76
NUP188-211ENST00000550219 HSPE1P61604 102 aaKnown RBP10.32□□□□□ -0.76
NUP188-211ENST00000550219 RRAS2P62070 204 aaPredicted RBP10.32□□□□□ -0.76
NUP188-211ENST00000550219 IL15RAQ13261 267 aa10.32□□□□□ -0.76
NUP188-211ENST00000550219 FXYD3Q14802 87 aa10.32□□□□□ -0.76
NUP188-211ENST00000550219 FCN2Q15485 313 aa10.32□□□□□ -0.76
NUP188-211ENST00000550219 TNXAQ16473 311 aa10.32□□□□□ -0.76
NUP188-211ENST00000550219 OR4D5Q8NGN0 318 aa10.32□□□□□ -0.76
NUP188-211ENST00000550219 OR1L8Q8NGR8 309 aa10.32□□□□□ -0.76
NUP188-211ENST00000550219 QTRT1Q9BXR0 403 aaKnown RBP10.32□□□□□ -0.76
NUP188-211ENST00000550219 MED28Q9H204 178 aa10.32□□□□□ -0.76
NUP188-211ENST00000550219 NDUFA4L2Q9NRX3 87 aa10.32□□□□□ -0.76
NUP188-211ENST00000550219 ZNF355PQ9NSJ1 428 aa10.32□□□□□ -0.76
NUP188-211ENST00000550219 OR51B2Q9Y5P1 312 aa10.32□□□□□ -0.76
NUP188-211ENST00000550219 TEX22C9J3V5 150 aa10.31□□□□□ -0.76
NUP188-211ENST00000550219 FAM90A26D6RGX4 464 aa10.31□□□□□ -0.76
NUP188-211ENST00000550219 GOSR2O14653 212 aa10.31□□□□□ -0.76
NUP188-211ENST00000550219 ACTL6BO94805 426 aa10.31□□□□□ -0.76
NUP188-211ENST00000550219 TRGV3P03979 118 aa10.31□□□□□ -0.76
NUP188-211ENST00000550219 CXCL3P19876 107 aa10.31□□□□□ -0.76
NUP188-211ENST00000550219 RPL27AP46776 148 aaKnown RBP10.31□□□□□ -0.76
NUP188-211ENST00000550219 H2BFSP57053 126 aa10.31□□□□□ -0.76
NUP188-211ENST00000550219 IAH1Q2TAA2 248 aaPredicted RBP10.31□□□□□ -0.76
NUP188-211ENST00000550219 C10orf55Q5SWW7 151 aa10.31□□□□□ -0.76
NUP188-211ENST00000550219 THOC7Q6I9Y2 204 aaKnown RBP10.31□□□□□ -0.76
NUP188-211ENST00000550219 GSG1LQ6UXU4 331 aa10.31□□□□□ -0.76
NUP188-211ENST00000550219 SBSPONQ8IVN8 264 aa10.31□□□□□ -0.76
NUP188-211ENST00000550219 ZBTB8BQ8NAP8 495 aaPredicted RBP10.31□□□□□ -0.76
NUP188-211ENST00000550219 OR11H7Q8NGC8 314 aa10.31□□□□□ -0.76
NUP188-211ENST00000550219 SRSF12Q8WXF0 261 aaKnown RBP10.31□□□□□ -0.76
NUP188-211ENST00000550219 C2orf50Q96LR7 162 aa10.31□□□□□ -0.76
NUP188-211ENST00000550219 RCHY1Q96PM5 261 aa10.31□□□□□ -0.76
NUP188-211ENST00000550219 OR4C12Q96R67 309 aa10.31□□□□□ -0.76
NUP188-211ENST00000550219 SRSF8Q9BRL6 282 aaKnown RBP10.31□□□□□ -0.76
NUP188-211ENST00000550219 COMMD5Q9GZQ3 224 aa10.31□□□□□ -0.76
NUP188-211ENST00000550219 MGAT4CQ9UBM8 478 aa10.31□□□□□ -0.76
NUP188-211ENST00000550219 HSPB7Q9UBY9 170 aa10.31□□□□□ -0.76
NUP188-211ENST00000550219 NBEAL2Q6ZNJ1 2754 aa10.3□□□□□ -0.76
NUP188-211ENST00000550219 C13orf42A0A1B0GVH6 325 aa10.3□□□□□ -0.76
NUP188-211ENST00000550219 C5orf51A6NDU8 294 aa10.3□□□□□ -0.76
NUP188-211ENST00000550219 INS-IGF2F8WCM5 200 aa10.3□□□□□ -0.76
NUP188-211ENST00000550219 RBMXL2O75526 392 aaKnown RBP10.3□□□□□ -0.76
NUP188-211ENST00000550219 CNIH1O95406 144 aa10.3□□□□□ -0.76
NUP188-211ENST00000550219 SIX6O95475 246 aa10.3□□□□□ -0.76
NUP188-211ENST00000550219 HSPB1P04792 205 aaKnown RBP10.3□□□□□ -0.76
NUP188-211ENST00000550219 FRMD6-AS1P0C7T7 363 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms