RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 PYDC2Q56P42 97 aa13.11□□□□□ -0.31
CHMP1A-208ENST00000550102 SLC25A24Q6NUK1 477 aa13.11□□□□□ -0.31
CHMP1A-208ENST00000550102 TMEM222Q9H0R3 208 aa13.11□□□□□ -0.31
CHMP1A-208ENST00000550102 NAA60Q9H7X0 242 aa13.11□□□□□ -0.31
CHMP1A-208ENST00000550102 PLEKHA3Q9HB20 300 aa13.11□□□□□ -0.31
CHMP1A-208ENST00000550102 MCUBQ9NWR8 336 aa13.11□□□□□ -0.31
CHMP1A-208ENST00000550102 SCP2D1Q9UJQ7 156 aa13.11□□□□□ -0.31
CHMP1A-208ENST00000550102 V9GYH0 126 aa13.11□□□□□ -0.31
CHMP1A-208ENST00000550102 OR5AC1P0C628 307 aa13.1□□□□□ -0.31
CHMP1A-208ENST00000550102 P0C879 139 aa13.1□□□□□ -0.31
CHMP1A-208ENST00000550102 FAUP35544 74 aaKnown RBP13.1□□□□□ -0.31
CHMP1A-208ENST00000550102 MFAP2P55001 183 aa13.1□□□□□ -0.31
CHMP1A-208ENST00000550102 AP3S2P59780 193 aa13.1□□□□□ -0.31
CHMP1A-208ENST00000550102 HSPE1P61604 102 aaKnown RBP13.1□□□□□ -0.31
CHMP1A-208ENST00000550102 FAM106AQ4KMX7 169 aa13.1□□□□□ -0.31
CHMP1A-208ENST00000550102 GPHB5Q86YW7 130 aa13.1□□□□□ -0.31
CHMP1A-208ENST00000550102 Q8N402 240 aa13.1□□□□□ -0.31
CHMP1A-208ENST00000550102 OR1P1Q8NH06 330 aa13.1□□□□□ -0.31
CHMP1A-208ENST00000550102 DYNLRB2Q8TF09 96 aa13.1□□□□□ -0.31
CHMP1A-208ENST00000550102 TRIM63Q969Q1 353 aa13.1□□□□□ -0.31
CHMP1A-208ENST00000550102 RRNAD1Q96FB5 475 aaKnown RBP13.1□□□□□ -0.31
CHMP1A-208ENST00000550102 RTBDNQ9BSG5 229 aaPredicted RBP13.1□□□□□ -0.31
CHMP1A-208ENST00000550102 THAP7Q9BT49 309 aaPredicted RBP13.1□□□□□ -0.31
CHMP1A-208ENST00000550102 C5orf66Q9H5L9 145 aa13.1□□□□□ -0.31
CHMP1A-208ENST00000550102 STAB2Q8WWQ8 2551 aa13.1□□□□□ -0.31
CHMP1A-208ENST00000550102 CRYM-AS1A6NIL9 109 aa13.09□□□□□ -0.31
CHMP1A-208ENST00000550102 C2orf70A6NJV1 201 aa13.09□□□□□ -0.31
CHMP1A-208ENST00000550102 A8MWP6 167 aa13.09□□□□□ -0.31
CHMP1A-208ENST00000550102 CLEC3BP05452 202 aa13.09□□□□□ -0.31
CHMP1A-208ENST00000550102 OR2C3Q8N628 320 aa13.09□□□□□ -0.31
CHMP1A-208ENST00000550102 SLC35G3Q8N808 338 aa13.09□□□□□ -0.31
CHMP1A-208ENST00000550102 ZNF114Q8NC26 417 aa13.09□□□□□ -0.31
CHMP1A-208ENST00000550102 OR2K2Q8NGT1 345 aa13.09□□□□□ -0.31
CHMP1A-208ENST00000550102 SCGB3A2Q96PL1 93 aa13.09□□□□□ -0.31
CHMP1A-208ENST00000550102 PDCD10Q9BUL8 212 aa13.09□□□□□ -0.31
CHMP1A-208ENST00000550102 GPR132Q9UNW8 380 aa13.09□□□□□ -0.31
CHMP1A-208ENST00000550102 DHODHQ02127 395 aa13.08□□□□□ -0.32
CHMP1A-208ENST00000550102 ZNF79Q15937 498 aa13.08□□□□□ -0.32
CHMP1A-208ENST00000550102 SPANXN2Q5MJ10 180 aa13.08□□□□□ -0.32
CHMP1A-208ENST00000550102 C11orf87Q6NUJ2 197 aa13.08□□□□□ -0.32
CHMP1A-208ENST00000550102 PLET1Q6UQ28 207 aa13.08□□□□□ -0.32
CHMP1A-208ENST00000550102 CCDC190Q86UF4 302 aa13.08□□□□□ -0.32
CHMP1A-208ENST00000550102 FAM219AQ8IW50 185 aa13.08□□□□□ -0.32
CHMP1A-208ENST00000550102 RBPMSQ93062 196 aaKnown RBP13.08□□□□□ -0.32
CHMP1A-208ENST00000550102 BSCL2Q96G97 398 aaPredicted RBP13.08□□□□□ -0.32
CHMP1A-208ENST00000550102 ATP6V0BQ99437 205 aa13.08□□□□□ -0.32
CHMP1A-208ENST00000550102 ZC4H2Q9NQZ6 224 aa13.08□□□□□ -0.32
CHMP1A-208ENST00000550102 C21orf62Q9NYP8 219 aa13.08□□□□□ -0.32
CHMP1A-208ENST00000550102 A0A0B4J293 547 aa13.07□□□□□ -0.32
CHMP1A-208ENST00000550102 ZNF320A2RRD8 509 aa13.07□□□□□ -0.32
CHMP1A-208ENST00000550102 OR2T8A6NH00 312 aa13.07□□□□□ -0.32
CHMP1A-208ENST00000550102 K7EIM0 57 aa13.07□□□□□ -0.32
CHMP1A-208ENST00000550102 ST8SIA3O43173 380 aa13.07□□□□□ -0.32
CHMP1A-208ENST00000550102 TGOLN2O43493 480 aa13.07□□□□□ -0.32
CHMP1A-208ENST00000550102 CDS2O95674 445 aa13.07□□□□□ -0.32
CHMP1A-208ENST00000550102 IFNA17P01571 189 aa13.07□□□□□ -0.32
CHMP1A-208ENST00000550102 NHLRC4P0CG21 123 aaPredicted RBP13.07□□□□□ -0.32
CHMP1A-208ENST00000550102 FOLR2P14207 255 aa13.07□□□□□ -0.32
CHMP1A-208ENST00000550102 ERHP84090 104 aaKnown RBP13.07□□□□□ -0.32
CHMP1A-208ENST00000550102 KLF9Q13886 244 aaPredicted RBP13.07□□□□□ -0.32
CHMP1A-208ENST00000550102 SPSB3Q6PJ21 355 aa13.07□□□□□ -0.32
CHMP1A-208ENST00000550102 ADAMTSL5Q6ZMM2 481 aa13.07□□□□□ -0.32
CHMP1A-208ENST00000550102 SGPP2Q8IWX5 399 aa13.07□□□□□ -0.32
CHMP1A-208ENST00000550102 TOMM5Q8N4H5 51 aa13.07□□□□□ -0.32
CHMP1A-208ENST00000550102 GLYATL2Q8WU03 294 aa13.07□□□□□ -0.32
CHMP1A-208ENST00000550102 MISP3Q96FF7 219 aa13.07□□□□□ -0.32
CHMP1A-208ENST00000550102 A0A0G2JRQ6 117 aa13.06□□□□□ -0.32
CHMP1A-208ENST00000550102 TMEM213A2RRL7 107 aa13.06□□□□□ -0.32
CHMP1A-208ENST00000550102 SPINK9Q5DT21 86 aa13.06□□□□□ -0.32
CHMP1A-208ENST00000550102 GTSCR1Q86UQ5 136 aa13.06□□□□□ -0.32
CHMP1A-208ENST00000550102 LHFPL5Q8TAF8 219 aa13.06□□□□□ -0.32
CHMP1A-208ENST00000550102 SCARB1Q8WTV0 552 aa13.06□□□□□ -0.32
CHMP1A-208ENST00000550102 PALMDQ9NP74 551 aa13.06□□□□□ -0.32
CHMP1A-208ENST00000550102 TECRQ9NZ01 308 aaKnown RBP13.06□□□□□ -0.32
CHMP1A-208ENST00000550102 IGHV3-21A0A0B4J1V1 117 aa13.05□□□□□ -0.32
CHMP1A-208ENST00000550102 IZUMO1RA6ND01 250 aa13.05□□□□□ -0.32
CHMP1A-208ENST00000550102 ETV6P41212 452 aa13.05□□□□□ -0.32
CHMP1A-208ENST00000550102 HOXA1P49639 335 aaPredicted RBP13.05□□□□□ -0.32
CHMP1A-208ENST00000550102 CD300EQ496F6 205 aaPredicted RBP13.05□□□□□ -0.32
CHMP1A-208ENST00000550102 Q56UQ5 140 aa13.05□□□□□ -0.32
CHMP1A-208ENST00000550102 TMEM268Q5VZI3 342 aa13.05□□□□□ -0.32
CHMP1A-208ENST00000550102 UBAC2Q8NBM4 344 aa13.05□□□□□ -0.32
CHMP1A-208ENST00000550102 DEDD2Q8WXF8 326 aa13.05□□□□□ -0.32
CHMP1A-208ENST00000550102 CACNG8Q8WXS5 425 aa13.05□□□□□ -0.32
CHMP1A-208ENST00000550102 TMEM230Q96A57 120 aa13.05□□□□□ -0.32
CHMP1A-208ENST00000550102 GAR1Q9NY12 217 aaKnown RBP13.05□□□□□ -0.32
CHMP1A-208ENST00000550102 UFC1Q9Y3C8 167 aa13.05□□□□□ -0.32
CHMP1A-208ENST00000550102 TENM3Q9P273 2699 aa13.04□□□□□ -0.32
CHMP1A-208ENST00000550102 DNAH9Q9NYC9 4486 aa13.04□□□□□ -0.32
CHMP1A-208ENST00000550102 IGHV3-35A0A0C4DH35 117 aa13.04□□□□□ -0.32
CHMP1A-208ENST00000550102 INS-IGF2F8WCM5 200 aa13.04□□□□□ -0.32
CHMP1A-208ENST00000550102 FRMD6-AS1P0C7T7 363 aa13.04□□□□□ -0.32
CHMP1A-208ENST00000550102 EDN2P20800 178 aa13.04□□□□□ -0.32
CHMP1A-208ENST00000550102 CBLN1P23435 193 aa13.04□□□□□ -0.32
CHMP1A-208ENST00000550102 SNCAP37840 140 aa13.04□□□□□ -0.32
CHMP1A-208ENST00000550102 DEFB114Q30KQ6 69 aa13.04□□□□□ -0.32
CHMP1A-208ENST00000550102 UNQ9165/PRO28630Q6UXU0 137 aa13.04□□□□□ -0.32
CHMP1A-208ENST00000550102 SELENOHQ8IZQ5 122 aaKnown RBP13.04□□□□□ -0.32
CHMP1A-208ENST00000550102 Q8N1Y9 231 aa13.04□□□□□ -0.32
CHMP1A-208ENST00000550102 TMEM190Q8WZ59 177 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms