RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 TMEM140Q9NV12 185 aa7.2□□□□□ -1.26
TRAFD1-207ENST00000550051 COMMD9Q9P000 198 aa7.2□□□□□ -1.26
TRAFD1-207ENST00000550051 FBXL17Q9UF56 701 aa7.2□□□□□ -1.26
TRAFD1-207ENST00000550051 ZNF207O43670 478 aaKnown RBP7.19□□□□□ -1.26
TRAFD1-207ENST00000550051 CD5P06127 495 aa7.19□□□□□ -1.26
TRAFD1-207ENST00000550051 FGF9P31371 208 aaPredicted RBP7.19□□□□□ -1.26
TRAFD1-207ENST00000550051 ARPC4P59998 168 aa7.19□□□□□ -1.26
TRAFD1-207ENST00000550051 ID3Q02535 119 aa7.19□□□□□ -1.26
TRAFD1-207ENST00000550051 RELQ04864 619 aaPredicted RBP7.19□□□□□ -1.26
TRAFD1-207ENST00000550051 C22orf42Q6IC83 251 aa7.19□□□□□ -1.26
TRAFD1-207ENST00000550051 TPRA1Q86W33 373 aa7.19□□□□□ -1.26
TRAFD1-207ENST00000550051 DMBX1Q8NFW5 382 aa7.19□□□□□ -1.26
TRAFD1-207ENST00000550051 TXN2Q99757 166 aa7.19□□□□□ -1.26
TRAFD1-207ENST00000550051 PCLOQ9Y6V0 5065 aa7.19□□□□□ -1.26
TRAFD1-207ENST00000550051 IGHV3OR16-8A0A075B7F1 116 aa7.18□□□□□ -1.26
TRAFD1-207ENST00000550051 TRAV14DV4A0A0A6YYC5 116 aa7.18□□□□□ -1.26
TRAFD1-207ENST00000550051 C15orf61A6NNL5 157 aa7.18□□□□□ -1.26
TRAFD1-207ENST00000550051 IGLL5B9A064 214 aa7.18□□□□□ -1.26
TRAFD1-207ENST00000550051 NUPL2O15504 423 aaKnown RBP7.18□□□□□ -1.26
TRAFD1-207ENST00000550051 DFFBO76075 338 aa7.18□□□□□ -1.26
TRAFD1-207ENST00000550051 PTHLHP12272 177 aa7.18□□□□□ -1.26
TRAFD1-207ENST00000550051 GNRHRP30968 328 aa7.18□□□□□ -1.26
TRAFD1-207ENST00000550051 PAFAH1B2P68402 229 aa7.18□□□□□ -1.26
TRAFD1-207ENST00000550051 TMEM187Q14656 261 aa7.18□□□□□ -1.26
TRAFD1-207ENST00000550051 DHRS11Q6UWP2 260 aa7.18□□□□□ -1.26
TRAFD1-207ENST00000550051 ZNF818PQ6ZRF7 136 aa7.18□□□□□ -1.26
TRAFD1-207ENST00000550051 BORCS5Q969J3 196 aa7.18□□□□□ -1.26
TRAFD1-207ENST00000550051 LSM10Q969L4 123 aaKnown RBP7.18□□□□□ -1.26
TRAFD1-207ENST00000550051 CMTM3Q96MX0 182 aa7.18□□□□□ -1.26
TRAFD1-207ENST00000550051 FKBP11Q9NYL4 201 aa7.18□□□□□ -1.26
TRAFD1-207ENST00000550051 A0A0A6YYH2 397 aa7.17□□□□□ -1.26
TRAFD1-207ENST00000550051 IGHV3-21A0A0B4J1V1 117 aa7.17□□□□□ -1.26
TRAFD1-207ENST00000550051 TRAV2A0A0B4J234 112 aa7.17□□□□□ -1.26
TRAFD1-207ENST00000550051 A0A1B0GVY2 172 aa7.17□□□□□ -1.26
TRAFD1-207ENST00000550051 A6NJ64 397 aa7.17□□□□□ -1.26
TRAFD1-207ENST00000550051 SNAPC5O75971 98 aa7.17□□□□□ -1.26
TRAFD1-207ENST00000550051 MED14OSP0DP75 135 aa7.17□□□□□ -1.26
TRAFD1-207ENST00000550051 F2RP25116 425 aa7.17□□□□□ -1.26
TRAFD1-207ENST00000550051 MFAP4P55083 255 aa7.17□□□□□ -1.26
TRAFD1-207ENST00000550051 AQP4P55087 323 aa7.17□□□□□ -1.26
TRAFD1-207ENST00000550051 SCAND1P57086 179 aa7.17□□□□□ -1.26
TRAFD1-207ENST00000550051 ERVK-16P61578 105 aa7.17□□□□□ -1.26
TRAFD1-207ENST00000550051 Q56UQ5 140 aa7.17□□□□□ -1.26
TRAFD1-207ENST00000550051 Q8NAQ8 132 aa7.17□□□□□ -1.26
TRAFD1-207ENST00000550051 UBAC2Q8NBM4 344 aa7.17□□□□□ -1.26
TRAFD1-207ENST00000550051 OR5AP2Q8NGF4 316 aa7.17□□□□□ -1.26
TRAFD1-207ENST00000550051 OR1P1Q8NH06 330 aa7.17□□□□□ -1.26
TRAFD1-207ENST00000550051 OR51H1Q8NH63 302 aa7.17□□□□□ -1.26
TRAFD1-207ENST00000550051 TMEM56Q96MV1 263 aa7.17□□□□□ -1.26
TRAFD1-207ENST00000550051 NXF2Q9GZY0 626 aaKnown RBP7.17□□□□□ -1.26
TRAFD1-207ENST00000550051 TXNL4BQ9NX01 149 aaKnown RBP7.17□□□□□ -1.26
TRAFD1-207ENST00000550051 RHBDL2Q9NX52 303 aa7.17□□□□□ -1.26
TRAFD1-207ENST00000550051 DAPK2Q9UIK4 370 aa7.17□□□□□ -1.26
TRAFD1-207ENST00000550051 OR51B2Q9Y5P1 312 aa7.17□□□□□ -1.26
TRAFD1-207ENST00000550051 MUC4Q99102 2169 aa7.16□□□□□ -1.26
TRAFD1-207ENST00000550051 TRAV18A0A075B6X5 111 aa7.16□□□□□ -1.26
TRAFD1-207ENST00000550051 SMIM30A4D0T7 59 aa7.16□□□□□ -1.26
TRAFD1-207ENST00000550051 MARCH11A6NNE9 402 aa7.16□□□□□ -1.26
TRAFD1-207ENST00000550051 I3L2K1 104 aa7.16□□□□□ -1.26
TRAFD1-207ENST00000550051 DEFB4AO15263 64 aa7.16□□□□□ -1.26
TRAFD1-207ENST00000550051 PGLYRP1O75594 196 aaPredicted RBP7.16□□□□□ -1.26
TRAFD1-207ENST00000550051 YIF1AO95070 293 aa7.16□□□□□ -1.26
TRAFD1-207ENST00000550051 CA1P00915 261 aaPredicted RBP7.16□□□□□ -1.26
TRAFD1-207ENST00000550051 KRASP01116 189 aa7.16□□□□□ -1.26
TRAFD1-207ENST00000550051 TFPI2P48307 235 aa7.16□□□□□ -1.26
TRAFD1-207ENST00000550051 FXYD4P59646 89 aa7.16□□□□□ -1.26
TRAFD1-207ENST00000550051 TMEM41BQ5BJD5 291 aa7.16□□□□□ -1.26
TRAFD1-207ENST00000550051 AADACL3Q5VUY0 350 aa7.16□□□□□ -1.26
TRAFD1-207ENST00000550051 GBGT1Q8N5D6 347 aa7.16□□□□□ -1.26
TRAFD1-207ENST00000550051 DUSP18Q8NEJ0 188 aa7.16□□□□□ -1.26
TRAFD1-207ENST00000550051 NRG4Q8WWG1 115 aa7.16□□□□□ -1.26
TRAFD1-207ENST00000550051 HINT2Q9BX68 163 aa7.16□□□□□ -1.26
TRAFD1-207ENST00000550051 VSIRQ9H7M9 311 aa7.16□□□□□ -1.26
TRAFD1-207ENST00000550051 TMEM14BQ9NUH8 114 aa7.16□□□□□ -1.26
TRAFD1-207ENST00000550051 PRNDQ9UKY0 176 aa7.16□□□□□ -1.26
TRAFD1-207ENST00000550051 DNAH6Q9C0G6 4158 aa7.16□□□□□ -1.26
TRAFD1-207ENST00000550051 KIAA1109Q2LD37 5005 aa7.16□□□□□ -1.26
TRAFD1-207ENST00000550051 IGKV3-7A0A075B6H7 116 aa7.15□□□□□ -1.26
TRAFD1-207ENST00000550051 IGHV3-49A0A0A0MS15 119 aa7.15□□□□□ -1.26
TRAFD1-207ENST00000550051 GIG44P09565 113 aaPredicted RBP7.15□□□□□ -1.26
TRAFD1-207ENST00000550051 RBMY1A1P0DJD3 496 aaKnown RBP7.15□□□□□ -1.26
TRAFD1-207ENST00000550051 RBMY1CP0DJD4 496 aa7.15□□□□□ -1.26
TRAFD1-207ENST00000550051 LPAR6P43657 344 aa7.15□□□□□ -1.26
TRAFD1-207ENST00000550051 CBX5P45973 191 aa7.15□□□□□ -1.26
TRAFD1-207ENST00000550051 RBMY1FQ15415 496 aaKnown RBP7.15□□□□□ -1.26
TRAFD1-207ENST00000550051 SFXN4Q6P4A7 337 aa7.15□□□□□ -1.26
TRAFD1-207ENST00000550051 TCF24Q7RTU0 167 aa7.15□□□□□ -1.26
TRAFD1-207ENST00000550051 LILRB2Q8N423 598 aa7.15□□□□□ -1.26
TRAFD1-207ENST00000550051 LGALS14Q8TCE9 139 aa7.15□□□□□ -1.26
TRAFD1-207ENST00000550051 FCAMRQ8WWV6 532 aa7.15□□□□□ -1.26
TRAFD1-207ENST00000550051 SLC25A46Q96AG3 418 aa7.15□□□□□ -1.26
TRAFD1-207ENST00000550051 SSBP4Q9BWG4 385 aaPredicted RBP7.15□□□□□ -1.26
TRAFD1-207ENST00000550051 MS4A6AQ9H2W1 248 aa7.15□□□□□ -1.26
TRAFD1-207ENST00000550051 AUNIPQ9H7T9 357 aa7.15□□□□□ -1.26
TRAFD1-207ENST00000550051 BLOC1S6Q9UL45 172 aa7.15□□□□□ -1.26
TRAFD1-207ENST00000550051 NSG2Q9Y328 171 aa7.15□□□□□ -1.26
TRAFD1-207ENST00000550051 RRP15Q9Y3B9 282 aaKnown RBP7.15□□□□□ -1.26
TRAFD1-207ENST00000550051 TRAV10A0A0B4J240 114 aa7.14□□□□□ -1.27
TRAFD1-207ENST00000550051 DBX1A6NMT0 343 aa7.14□□□□□ -1.27
TRAFD1-207ENST00000550051 ZNF705EA8MWA4 302 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms