RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 RPL28P46779 137 aaKnown RBP1.9□□□□□ -2.11
SNRPF-202ENST00000549580 RAB14P61106 215 aa1.9□□□□□ -2.11
SNRPF-202ENST00000549580 ZNF90Q03938 601 aa1.9□□□□□ -2.11
SNRPF-202ENST00000549580 KRR1Q13601 381 aaKnown RBP1.9□□□□□ -2.11
SNRPF-202ENST00000549580 SS18Q15532 418 aa1.9□□□□□ -2.11
SNRPF-202ENST00000549580 FAM173BQ6P4H8 233 aa1.9□□□□□ -2.11
SNRPF-202ENST00000549580 OR11H6Q8NGC7 330 aa1.9□□□□□ -2.11
SNRPF-202ENST00000549580 OR51T1Q8NGJ9 327 aa1.9□□□□□ -2.11
SNRPF-202ENST00000549580 PRRT1Q99946 306 aa1.9□□□□□ -2.11
SNRPF-202ENST00000549580 Q9BRP9 147 aa1.9□□□□□ -2.11
SNRPF-202ENST00000549580 DERL1Q9BUN8 251 aa1.9□□□□□ -2.11
SNRPF-202ENST00000549580 KRTAP4-1Q9BYQ7 146 aa1.9□□□□□ -2.11
SNRPF-202ENST00000549580 OR8D2Q9GZM6 311 aa1.9□□□□□ -2.11
SNRPF-202ENST00000549580 TIMM22Q9Y584 194 aa1.9□□□□□ -2.11
SNRPF-202ENST00000549580 CAMSAP1Q5T5Y3 1602 aa1.9□□□□□ -2.11
SNRPF-202ENST00000549580 HECW2Q9P2P5 1572 aa1.89□□□□□ -2.11
SNRPF-202ENST00000549580 MYO16Q9Y6X6 1858 aa1.89□□□□□ -2.11
SNRPF-202ENST00000549580 TRAV38-1A0A0B4J264 116 aa1.89□□□□□ -2.11
SNRPF-202ENST00000549580 TRAV41A0A0B4J266 112 aa1.89□□□□□ -2.11
SNRPF-202ENST00000549580 ZNF682O95780 498 aa1.89□□□□□ -2.11
SNRPF-202ENST00000549580 LGALS1P09382 135 aaKnown RBP1.89□□□□□ -2.11
SNRPF-202ENST00000549580 G0S2P27469 103 aa1.89□□□□□ -2.11
SNRPF-202ENST00000549580 ERP29P30040 261 aaKnown RBP1.89□□□□□ -2.11
SNRPF-202ENST00000549580 HINT1P49773 126 aaPredicted RBP1.89□□□□□ -2.11
SNRPF-202ENST00000549580 GNG10P50151 68 aa1.89□□□□□ -2.11
SNRPF-202ENST00000549580 POU6F1Q14863 301 aa1.89□□□□□ -2.11
SNRPF-202ENST00000549580 MOGQ16653 247 aa1.89□□□□□ -2.11
SNRPF-202ENST00000549580 ZNF181Q2M3W8 571 aa1.89□□□□□ -2.11
SNRPF-202ENST00000549580 KRTAP6-3Q3LI67 103 aa1.89□□□□□ -2.11
SNRPF-202ENST00000549580 SPANXN3Q5MJ09 141 aa1.89□□□□□ -2.11
SNRPF-202ENST00000549580 OR4X2Q8NGF9 303 aa1.89□□□□□ -2.11
SNRPF-202ENST00000549580 ZCCHC13Q8WW36 166 aaKnown RBP1.89□□□□□ -2.11
SNRPF-202ENST00000549580 H1FXQ92522 213 aaKnown RBP1.89□□□□□ -2.11
SNRPF-202ENST00000549580 SLC7A6Q92536 515 aa1.89□□□□□ -2.11
SNRPF-202ENST00000549580 DNAJC30Q96LL9 226 aa1.89□□□□□ -2.11
SNRPF-202ENST00000549580 SLX4Q8IY92 1834 aa1.89□□□□□ -2.11
SNRPF-202ENST00000549580 IGHV3-64A0A075B6Q5 118 aa1.88□□□□□ -2.11
SNRPF-202ENST00000549580 TRAV7A0A075B6U4 112 aa1.88□□□□□ -2.11
SNRPF-202ENST00000549580 IGKV1D-43A0A0B4J1Z2 117 aa1.88□□□□□ -2.11
SNRPF-202ENST00000549580 H7C2G1 150 aa1.88□□□□□ -2.11
SNRPF-202ENST00000549580 SLC22A1O15245 554 aa1.88□□□□□ -2.11
SNRPF-202ENST00000549580 IGKV1-5P01602 117 aa1.88□□□□□ -2.11
SNRPF-202ENST00000549580 HSPE1P61604 102 aaKnown RBP1.88□□□□□ -2.11
SNRPF-202ENST00000549580 ERHP84090 104 aaKnown RBP1.88□□□□□ -2.11
SNRPF-202ENST00000549580 GOLT1AQ6ZVE7 132 aa1.88□□□□□ -2.11
SNRPF-202ENST00000549580 DYNAPQ8N1N2 210 aa1.88□□□□□ -2.11
SNRPF-202ENST00000549580 RPP25LQ8N5L8 163 aaKnown RBP1.88□□□□□ -2.11
SNRPF-202ENST00000549580 SELENOSQ9BQE4 189 aa1.88□□□□□ -2.11
SNRPF-202ENST00000549580 PARVBQ9HBI1 364 aa1.88□□□□□ -2.11
SNRPF-202ENST00000549580 GID8Q9NWU2 228 aa1.88□□□□□ -2.11
SNRPF-202ENST00000549580 TVP23BQ9NYZ1 205 aa1.88□□□□□ -2.11
SNRPF-202ENST00000549580 TP73-AS1Q9UF72 201 aa1.88□□□□□ -2.11
SNRPF-202ENST00000549580 KIF13BQ9NQT8 1826 aa1.88□□□□□ -2.11
SNRPF-202ENST00000549580 ADAMTS7Q9UKP4 1686 aa1.87□□□□□ -2.11
SNRPF-202ENST00000549580 ATG12O94817 140 aa1.87□□□□□ -2.11
SNRPF-202ENST00000549580 SMIM17P0DL12 118 aa1.87□□□□□ -2.11
SNRPF-202ENST00000549580 CYBAP13498 195 aa1.87□□□□□ -2.11
SNRPF-202ENST00000549580 NFYAP23511 347 aaPredicted RBP1.87□□□□□ -2.11
SNRPF-202ENST00000549580 EVX1P49640 407 aa1.87□□□□□ -2.11
SNRPF-202ENST00000549580 ARHGAP11BQ3KRB8 267 aa1.87□□□□□ -2.11
SNRPF-202ENST00000549580 Q6Q795 121 aa1.87□□□□□ -2.11
SNRPF-202ENST00000549580 LYG2Q86SG7 212 aa1.87□□□□□ -2.11
SNRPF-202ENST00000549580 C12orf45Q8N5I9 185 aaPredicted RBP1.87□□□□□ -2.11
SNRPF-202ENST00000549580 SLC25A40Q8TBP6 338 aa1.87□□□□□ -2.11
SNRPF-202ENST00000549580 RASSF5Q8WWW0 418 aa1.87□□□□□ -2.11
SNRPF-202ENST00000549580 C2orf50Q96LR7 162 aa1.87□□□□□ -2.11
SNRPF-202ENST00000549580 CXCL16Q9H2A7 254 aa1.87□□□□□ -2.11
SNRPF-202ENST00000549580 SLC39A9Q9NUM3 307 aa1.87□□□□□ -2.11
SNRPF-202ENST00000549580 PYCARDQ9ULZ3 195 aa1.87□□□□□ -2.11
SNRPF-202ENST00000549580 CYSLTR1Q9Y271 337 aa1.87□□□□□ -2.11
SNRPF-202ENST00000549580 V9GYQ6 96 aa1.87□□□□□ -2.11
SNRPF-202ENST00000549580 COL5A1P20908 1838 aaPredicted RBP1.87□□□□□ -2.11
SNRPF-202ENST00000549580 MAST2Q6P0Q8 1798 aa1.86□□□□□ -2.11
SNRPF-202ENST00000549580 TRGV4A0A0C4DH28 118 aa1.86□□□□□ -2.11
SNRPF-202ENST00000549580 IGHV1-18A0A0C4DH31 117 aa1.86□□□□□ -2.11
SNRPF-202ENST00000549580 RFPL4AA6NLU0 287 aa1.86□□□□□ -2.11
SNRPF-202ENST00000549580 RFPL4AL1F8VTS6 287 aa1.86□□□□□ -2.11
SNRPF-202ENST00000549580 J3QRE1 110 aa1.86□□□□□ -2.11
SNRPF-202ENST00000549580 HMGB3O15347 200 aaKnown RBP1.86□□□□□ -2.11
SNRPF-202ENST00000549580 IFNA1P01562 189 aa1.86□□□□□ -2.11
SNRPF-202ENST00000549580 PPBPP02775 128 aa1.86□□□□□ -2.11
SNRPF-202ENST00000549580 CSRP1P21291 193 aaKnown RBP1.86□□□□□ -2.11
SNRPF-202ENST00000549580 RPS4Y1P22090 263 aaKnown RBP1.86□□□□□ -2.11
SNRPF-202ENST00000549580 S100A4P26447 101 aaKnown RBP1.86□□□□□ -2.11
SNRPF-202ENST00000549580 EIF2B2P49770 351 aaKnown RBP1.86□□□□□ -2.11
SNRPF-202ENST00000549580 TMEM258P61165 79 aa1.86□□□□□ -2.11
SNRPF-202ENST00000549580 NEK7Q8TDX7 302 aa1.86□□□□□ -2.11
SNRPF-202ENST00000549580 GPR146Q96CH1 333 aa1.86□□□□□ -2.11
SNRPF-202ENST00000549580 CHST6Q9GZX3 395 aa1.86□□□□□ -2.11
SNRPF-202ENST00000549580 ATPIF1Q9UII2 106 aa1.86□□□□□ -2.11
SNRPF-202ENST00000549580 HIVEP2P31629 2446 aa1.86□□□□□ -2.11
SNRPF-202ENST00000549580 COL4A2P08572 1712 aa1.86□□□□□ -2.11
SNRPF-202ENST00000549580 PTPRSQ13332 1948 aa1.85□□□□□ -2.11
SNRPF-202ENST00000549580 SCN9AQ15858 1988 aa1.85□□□□□ -2.11
SNRPF-202ENST00000549580 TRAPPC13A5PLN9 417 aa1.85□□□□□ -2.11
SNRPF-202ENST00000549580 LY6LH3BQJ8 138 aa1.85□□□□□ -2.11
SNRPF-202ENST00000549580 J3QQQ9 107 aa1.85□□□□□ -2.11
SNRPF-202ENST00000549580 J3QRK9 145 aa1.85□□□□□ -2.11
SNRPF-202ENST00000549580 CASP1P29466 404 aa1.85□□□□□ -2.11
SNRPF-202ENST00000549580 RPL26P61254 145 aaKnown RBP1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms