RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 ZNF79Q15937 498 aa12□□□□□ -0.49
DDX54-205ENST00000548786 HSD17B13Q7Z5P4 300 aaPredicted RBP12□□□□□ -0.49
DDX54-205ENST00000548786 Q8N402 240 aa12□□□□□ -0.49
DDX54-205ENST00000548786 UBAC2Q8NBM4 344 aa12□□□□□ -0.49
DDX54-205ENST00000548786 ZNF502Q8TBZ5 544 aa12□□□□□ -0.49
DDX54-205ENST00000548786 CACNG8Q8WXS5 425 aa12□□□□□ -0.49
DDX54-205ENST00000548786 NAA60Q9H7X0 242 aa12□□□□□ -0.49
DDX54-205ENST00000548786 THYN1Q9P016 225 aa12□□□□□ -0.49
DDX54-205ENST00000548786 PEMTQ9UBM1 199 aa12□□□□□ -0.49
DDX54-205ENST00000548786 F11RQ9Y624 299 aaKnown RBP12□□□□□ -0.49
DDX54-205ENST00000548786 TRBV7-1A0A0A6YYK4 115 aa11.99□□□□□ -0.49
DDX54-205ENST00000548786 A0A0B4J293 547 aa11.99□□□□□ -0.49
DDX54-205ENST00000548786 IZUMO1RA6ND01 250 aa11.99□□□□□ -0.49
DDX54-205ENST00000548786 OR2T8A6NH00 312 aa11.99□□□□□ -0.49
DDX54-205ENST00000548786 UCP1P25874 307 aa11.99□□□□□ -0.49
DDX54-205ENST00000548786 PRCDQ00LT1 54 aa11.99□□□□□ -0.49
DDX54-205ENST00000548786 KLK9Q2XQG4 91 aa11.99□□□□□ -0.49
DDX54-205ENST00000548786 ADAMTSL5Q6ZMM2 481 aa11.99□□□□□ -0.49
DDX54-205ENST00000548786 CADM3Q8N126 398 aa11.99□□□□□ -0.49
DDX54-205ENST00000548786 LHFPL5Q8TAF8 219 aa11.99□□□□□ -0.49
DDX54-205ENST00000548786 DYNLRB2Q8TF09 96 aa11.99□□□□□ -0.49
DDX54-205ENST00000548786 TRIM63Q969Q1 353 aa11.99□□□□□ -0.49
DDX54-205ENST00000548786 RRNAD1Q96FB5 475 aaKnown RBP11.99□□□□□ -0.49
DDX54-205ENST00000548786 MISP3Q96FF7 219 aa11.99□□□□□ -0.49
DDX54-205ENST00000548786 TMEM222Q9H0R3 208 aa11.99□□□□□ -0.49
DDX54-205ENST00000548786 PLEKHA3Q9HB20 300 aa11.99□□□□□ -0.49
DDX54-205ENST00000548786 SCP2D1Q9UJQ7 156 aa11.99□□□□□ -0.49
DDX54-205ENST00000548786 KLK9Q9UKQ9 250 aa11.99□□□□□ -0.49
DDX54-205ENST00000548786 GPR132Q9UNW8 380 aa11.99□□□□□ -0.49
DDX54-205ENST00000548786 SMAD5-AS1Q9Y6J3 95 aa11.99□□□□□ -0.49
DDX54-205ENST00000548786 ZNF701M0R085 212 aaPredicted RBP11.98□□□□□ -0.49
DDX54-205ENST00000548786 ST8SIA3O43173 380 aa11.98□□□□□ -0.49
DDX54-205ENST00000548786 ATG12O94817 140 aa11.98□□□□□ -0.49
DDX54-205ENST00000548786 IFNA17P01571 189 aa11.98□□□□□ -0.49
DDX54-205ENST00000548786 IGHV3-48P01763 117 aa11.98□□□□□ -0.49
DDX54-205ENST00000548786 P0C879 139 aa11.98□□□□□ -0.49
DDX54-205ENST00000548786 AKR1C4P17516 323 aa11.98□□□□□ -0.49
DDX54-205ENST00000548786 HSPE1P61604 102 aaKnown RBP11.98□□□□□ -0.49
DDX54-205ENST00000548786 KLF9Q13886 244 aaPredicted RBP11.98□□□□□ -0.49
DDX54-205ENST00000548786 SURF2Q15527 256 aaPredicted RBP11.98□□□□□ -0.49
DDX54-205ENST00000548786 FAM209BQ5JX69 171 aa11.98□□□□□ -0.49
DDX54-205ENST00000548786 PLET1Q6UQ28 207 aa11.98□□□□□ -0.49
DDX54-205ENST00000548786 CCDC190Q86UF4 302 aa11.98□□□□□ -0.49
DDX54-205ENST00000548786 TOMM5Q8N4H5 51 aa11.98□□□□□ -0.49
DDX54-205ENST00000548786 SLC35G3Q8N808 338 aa11.98□□□□□ -0.49
DDX54-205ENST00000548786 SLC2A8Q9NY64 477 aa11.98□□□□□ -0.49
DDX54-205ENST00000548786 CRYM-AS1A6NIL9 109 aa11.97□□□□□ -0.49
DDX54-205ENST00000548786 C2orf70A6NJV1 201 aa11.97□□□□□ -0.49
DDX54-205ENST00000548786 K7EIM0 57 aa11.97□□□□□ -0.49
DDX54-205ENST00000548786 NXPH3O95157 252 aa11.97□□□□□ -0.49
DDX54-205ENST00000548786 HOXA1P49639 335 aaPredicted RBP11.97□□□□□ -0.49
DDX54-205ENST00000548786 Q56UQ5 140 aa11.97□□□□□ -0.49
DDX54-205ENST00000548786 TMEM268Q5VZI3 342 aa11.97□□□□□ -0.49
DDX54-205ENST00000548786 UNQ9165/PRO28630Q6UXU0 137 aa11.97□□□□□ -0.49
DDX54-205ENST00000548786 OR2C3Q8N628 320 aa11.97□□□□□ -0.49
DDX54-205ENST00000548786 VN1R17PQ8TDU5 208 aa11.97□□□□□ -0.49
DDX54-205ENST00000548786 SCARB1Q8WTV0 552 aa11.97□□□□□ -0.49
DDX54-205ENST00000548786 GLYATL2Q8WU03 294 aa11.97□□□□□ -0.49
DDX54-205ENST00000548786 TMEM230Q96A57 120 aa11.97□□□□□ -0.49
DDX54-205ENST00000548786 PINX1Q96BK5 328 aaKnown RBP11.97□□□□□ -0.49
DDX54-205ENST00000548786 PDCD10Q9BUL8 212 aa11.97□□□□□ -0.49
DDX54-205ENST00000548786 C21orf62Q9NYP8 219 aa11.97□□□□□ -0.49
DDX54-205ENST00000548786 IGHV3OR16-8A0A075B7F1 116 aa11.96□□□□□ -0.49
DDX54-205ENST00000548786 TGOLN2O43493 480 aa11.96□□□□□ -0.49
DDX54-205ENST00000548786 FOLR2P14207 255 aa11.96□□□□□ -0.49
DDX54-205ENST00000548786 ETV6P41212 452 aa11.96□□□□□ -0.49
DDX54-205ENST00000548786 CD300EQ496F6 205 aaPredicted RBP11.96□□□□□ -0.49
DDX54-205ENST00000548786 FAM106AQ4KMX7 169 aa11.96□□□□□ -0.49
DDX54-205ENST00000548786 TM4SF20Q53R12 229 aa11.96□□□□□ -0.49
DDX54-205ENST00000548786 SPANXN2Q5MJ10 180 aa11.96□□□□□ -0.49
DDX54-205ENST00000548786 ZNF57Q68EA5 555 aaPredicted RBP11.96□□□□□ -0.49
DDX54-205ENST00000548786 LCN12Q6JVE5 192 aa11.96□□□□□ -0.49
DDX54-205ENST00000548786 Q6ZRM9 215 aa11.96□□□□□ -0.49
DDX54-205ENST00000548786 TMED4Q7Z7H5 227 aa11.96□□□□□ -0.49
DDX54-205ENST00000548786 GPHB5Q86YW7 130 aa11.96□□□□□ -0.49
DDX54-205ENST00000548786 SGPP2Q8IWX5 399 aa11.96□□□□□ -0.49
DDX54-205ENST00000548786 SELENOHQ8IZQ5 122 aaKnown RBP11.96□□□□□ -0.49
DDX54-205ENST00000548786 OR1P1Q8NH06 330 aa11.96□□□□□ -0.49
DDX54-205ENST00000548786 TMEM213A2RRL7 107 aa11.95□□□□□ -0.5
DDX54-205ENST00000548786 LGALS9O00182 355 aa11.95□□□□□ -0.5
DDX54-205ENST00000548786 B3GALNT1O75752 331 aa11.95□□□□□ -0.5
DDX54-205ENST00000548786 CDS2O95674 445 aa11.95□□□□□ -0.5
DDX54-205ENST00000548786 FAUP35544 74 aaKnown RBP11.95□□□□□ -0.5
DDX54-205ENST00000548786 AP3S2P59780 193 aa11.95□□□□□ -0.5
DDX54-205ENST00000548786 ERHP84090 104 aaKnown RBP11.95□□□□□ -0.5
DDX54-205ENST00000548786 RBPMSQ93062 196 aaKnown RBP11.95□□□□□ -0.5
DDX54-205ENST00000548786 CHRDL1Q9BU40 450 aa11.95□□□□□ -0.5
DDX54-205ENST00000548786 CACNG5Q9UF02 275 aa11.95□□□□□ -0.5
DDX54-205ENST00000548786 LINC00854A0A1B0GVQ3 168 aa11.94□□□□□ -0.5
DDX54-205ENST00000548786 MT-CO2P00403 227 aa11.94□□□□□ -0.5
DDX54-205ENST00000548786 FRMD6-AS1P0C7T7 363 aa11.94□□□□□ -0.5
DDX54-205ENST00000548786 CBLN1P23435 193 aa11.94□□□□□ -0.5
DDX54-205ENST00000548786 SNCAP37840 140 aa11.94□□□□□ -0.5
DDX54-205ENST00000548786 DHODHQ02127 395 aa11.94□□□□□ -0.5
DDX54-205ENST00000548786 GUCA2BQ16661 112 aa11.94□□□□□ -0.5
DDX54-205ENST00000548786 OR1L6Q8NGR2 347 aa11.94□□□□□ -0.5
DDX54-205ENST00000548786 GPR146Q96CH1 333 aa11.94□□□□□ -0.5
DDX54-205ENST00000548786 SCGB3A2Q96PL1 93 aa11.94□□□□□ -0.5
DDX54-205ENST00000548786 SRRQ9GZT4 340 aa11.94□□□□□ -0.5
DDX54-205ENST00000548786 ENY2Q9NPA8 101 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms