RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 KIAA1456Q9P272 454 aa13.77□□□□□ -0.21
HDAC7-227ENST00000548080 TET2Q6N021 2002 aaPredicted RBP13.77□□□□□ -0.21
HDAC7-227ENST00000548080 HAX1O00165 279 aa13.76□□□□□ -0.21
HDAC7-227ENST00000548080 NDUFA3O95167 84 aa13.76□□□□□ -0.21
HDAC7-227ENST00000548080 COMPP49747 757 aaPredicted RBP13.76□□□□□ -0.21
HDAC7-227ENST00000548080 BAXQ07812 192 aa13.76□□□□□ -0.21
HDAC7-227ENST00000548080 PJVKQ0ZLH3 352 aa13.76□□□□□ -0.21
HDAC7-227ENST00000548080 PLGLAQ15195 96 aa13.76□□□□□ -0.21
HDAC7-227ENST00000548080 TMEM95Q3KNT9 176 aa13.76□□□□□ -0.21
HDAC7-227ENST00000548080 SLC51BQ86UW2 128 aa13.76□□□□□ -0.21
HDAC7-227ENST00000548080 PPP1R27Q86WC6 154 aa13.76□□□□□ -0.21
HDAC7-227ENST00000548080 SPATA3Q8NHX4 192 aa13.76□□□□□ -0.21
HDAC7-227ENST00000548080 RBM14Q96PK6 669 aaKnown RBP13.76□□□□□ -0.21
HDAC7-227ENST00000548080 NPFFR1Q9GZQ6 430 aa13.76□□□□□ -0.21
HDAC7-227ENST00000548080 FBXL17Q9UF56 701 aa13.76□□□□□ -0.21
HDAC7-227ENST00000548080 STRAPQ9Y3F4 350 aaKnown RBP13.76□□□□□ -0.21
HDAC7-227ENST00000548080 TNCP24821 2201 aa13.76□□□□□ -0.21
HDAC7-227ENST00000548080 TSPAN9O75954 239 aa13.75□□□□□ -0.21
HDAC7-227ENST00000548080 OPN1MWP04001 364 aa13.75□□□□□ -0.21
HDAC7-227ENST00000548080 OPN1MW2P0DN77 364 aa13.75□□□□□ -0.21
HDAC7-227ENST00000548080 OPN1MW3P0DN78 364 aa13.75□□□□□ -0.21
HDAC7-227ENST00000548080 SULT1A1P50225 295 aa13.75□□□□□ -0.21
HDAC7-227ENST00000548080 RPP30P78346 268 aaKnown RBP13.75□□□□□ -0.21
HDAC7-227ENST00000548080 C9orf152Q5JTZ5 239 aa13.75□□□□□ -0.21
HDAC7-227ENST00000548080 HIST2H2BDQ6DRA6 164 aa13.75□□□□□ -0.21
HDAC7-227ENST00000548080 TMEM14EPQ6UXP3 125 aa13.75□□□□□ -0.21
HDAC7-227ENST00000548080 STX12Q86Y82 276 aa13.75□□□□□ -0.21
HDAC7-227ENST00000548080 C3orf56Q8N813 242 aa13.75□□□□□ -0.21
HDAC7-227ENST00000548080 OR4C12Q96R67 309 aa13.75□□□□□ -0.21
HDAC7-227ENST00000548080 ZNF471Q9BX82 626 aaPredicted RBP13.75□□□□□ -0.21
HDAC7-227ENST00000548080 PLEKHA3Q9HB20 300 aa13.75□□□□□ -0.21
HDAC7-227ENST00000548080 CYTL1Q9NRR1 136 aa13.75□□□□□ -0.21
HDAC7-227ENST00000548080 NDUFA4L2Q9NRX3 87 aa13.75□□□□□ -0.21
HDAC7-227ENST00000548080 RNF114Q9Y508 228 aa13.75□□□□□ -0.21
HDAC7-227ENST00000548080 CLPSL1A2RUU4 121 aa13.74□□□□□ -0.21
HDAC7-227ENST00000548080 CST7O76096 145 aa13.74□□□□□ -0.21
HDAC7-227ENST00000548080 ACTL6BO94805 426 aa13.74□□□□□ -0.21
HDAC7-227ENST00000548080 METTL15P1P0C7V9 234 aa13.74□□□□□ -0.21
HDAC7-227ENST00000548080 TMEM267Q0VDI3 215 aaPredicted RBP13.74□□□□□ -0.21
HDAC7-227ENST00000548080 C5orf64Q2M2E5 130 aa13.74□□□□□ -0.21
HDAC7-227ENST00000548080 OR8H1Q8NGG4 311 aa13.74□□□□□ -0.21
HDAC7-227ENST00000548080 SMIM3Q9BZL3 60 aa13.74□□□□□ -0.21
HDAC7-227ENST00000548080 C16orf95Q9H693 158 aa13.74□□□□□ -0.21
HDAC7-227ENST00000548080 A0A1W2PN81 502 aa13.74□□□□□ -0.21
HDAC7-227ENST00000548080 AMY1AP04745 511 aa13.74□□□□□ -0.21
HDAC7-227ENST00000548080 CHRNA7P36544 502 aa13.74□□□□□ -0.21
HDAC7-227ENST00000548080 KRTAP10-3P60369 221 aa13.74□□□□□ -0.21
HDAC7-227ENST00000548080 TNXAQ16473 311 aa13.74□□□□□ -0.21
HDAC7-227ENST00000548080 ARSJQ5FYB0 599 aaPredicted RBP13.74□□□□□ -0.21
HDAC7-227ENST00000548080 PAIP2BQ9ULR5 123 aaKnown RBP13.74□□□□□ -0.21
HDAC7-227ENST00000548080 MOB4Q9Y3A3 225 aa13.74□□□□□ -0.21
HDAC7-227ENST00000548080 U3KQ87 197 aa13.74□□□□□ -0.21
HDAC7-227ENST00000548080 NCBP2LA6PVI3 153 aaKnown RBP13.73□□□□□ -0.21
HDAC7-227ENST00000548080 C15orf62A8K5M9 175 aa13.73□□□□□ -0.21
HDAC7-227ENST00000548080 INS-IGF2F8WCM5 200 aa13.73□□□□□ -0.21
HDAC7-227ENST00000548080 FCN1O00602 326 aa13.73□□□□□ -0.21
HDAC7-227ENST00000548080 IFNA10P01566 189 aa13.73□□□□□ -0.21
HDAC7-227ENST00000548080 RPL27AP46776 148 aaKnown RBP13.73□□□□□ -0.21
HDAC7-227ENST00000548080 C10orf55Q5SWW7 151 aa13.73□□□□□ -0.21
HDAC7-227ENST00000548080 TEX261Q6UWH6 196 aa13.73□□□□□ -0.21
HDAC7-227ENST00000548080 OR1S2Q8NGQ3 325 aa13.73□□□□□ -0.21
HDAC7-227ENST00000548080 PRSS22Q9GZN4 317 aa13.73□□□□□ -0.21
HDAC7-227ENST00000548080 WFDC1Q9HC57 220 aa13.73□□□□□ -0.21
HDAC7-227ENST00000548080 CGB1A6NKQ9 187 aa13.72□□□□□ -0.21
HDAC7-227ENST00000548080 E7EUB6 86 aa13.72□□□□□ -0.21
HDAC7-227ENST00000548080 RGS13O14921 159 aa13.72□□□□□ -0.21
HDAC7-227ENST00000548080 PROK1P58294 105 aa13.72□□□□□ -0.21
HDAC7-227ENST00000548080 GNB1P62873 340 aa13.72□□□□□ -0.21
HDAC7-227ENST00000548080 RPL7L1Q6DKI1 246 aaKnown RBP13.72□□□□□ -0.21
HDAC7-227ENST00000548080 C16orf82Q7Z2V1 217 aa13.72□□□□□ -0.21
HDAC7-227ENST00000548080 STPG2Q8N412 459 aa13.72□□□□□ -0.21
HDAC7-227ENST00000548080 TMEM217Q8N7C4 229 aa13.72□□□□□ -0.21
HDAC7-227ENST00000548080 OR10W1Q8NGF6 305 aa13.72□□□□□ -0.21
HDAC7-227ENST00000548080 OR5C1Q8NGR4 320 aa13.72□□□□□ -0.21
HDAC7-227ENST00000548080 OR2T6Q8NHC8 308 aa13.72□□□□□ -0.21
HDAC7-227ENST00000548080 WFDC12Q8WWY7 111 aa13.72□□□□□ -0.21
HDAC7-227ENST00000548080 ST8SIA2Q92186 375 aa13.72□□□□□ -0.21
HDAC7-227ENST00000548080 BORCS7-ASMTA0A0B4J1R7 106 aa13.71□□□□□ -0.21
HDAC7-227ENST00000548080 JTBO76095 146 aa13.71□□□□□ -0.21
HDAC7-227ENST00000548080 SCAF4O95104 1147 aaKnown RBP13.71□□□□□ -0.21
HDAC7-227ENST00000548080 CFDP00746 253 aaPredicted RBP13.71□□□□□ -0.21
HDAC7-227ENST00000548080 CA2P00918 260 aa13.71□□□□□ -0.21
HDAC7-227ENST00000548080 ATP5IP56385 69 aaPredicted RBP13.71□□□□□ -0.21
HDAC7-227ENST00000548080 EIF5AP63241 154 aaKnown RBP13.71□□□□□ -0.21
HDAC7-227ENST00000548080 HBG1P69891 147 aa13.71□□□□□ -0.21
HDAC7-227ENST00000548080 HBG2P69892 147 aa13.71□□□□□ -0.21
HDAC7-227ENST00000548080 ERHP84090 104 aaKnown RBP13.71□□□□□ -0.21
HDAC7-227ENST00000548080 ARL16Q0P5N6 197 aa13.71□□□□□ -0.21
HDAC7-227ENST00000548080 CLINT1Q14677 625 aa13.71□□□□□ -0.21
HDAC7-227ENST00000548080 OR8G2PQ6IF36 304 aa13.71□□□□□ -0.21
HDAC7-227ENST00000548080 HAPLN4Q86UW8 402 aa13.71□□□□□ -0.21
HDAC7-227ENST00000548080 C5orf56Q8N8D9 126 aa13.71□□□□□ -0.21
HDAC7-227ENST00000548080 ZNF680Q8NEM1 530 aa13.71□□□□□ -0.21
HDAC7-227ENST00000548080 STOML3Q8TAV4 291 aa13.71□□□□□ -0.21
HDAC7-227ENST00000548080 A0A1B0GW64 132 aa13.7□□□□□ -0.22
HDAC7-227ENST00000548080 PMS2P5A8MQ11 134 aa13.7□□□□□ -0.22
HDAC7-227ENST00000548080 OR8U8P0C7N1 319 aa13.7□□□□□ -0.22
HDAC7-227ENST00000548080 TPT1P13693 172 aaKnown RBP13.7□□□□□ -0.22
HDAC7-227ENST00000548080 HTR2BP41595 481 aa13.7□□□□□ -0.22
HDAC7-227ENST00000548080 RAB11AP62491 216 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms