RNA–Protein interactions for RNA: ENST00000546509.5

ERGIC2-202, Transcript of ERGIC and golgi 2, humanhuman

TSL 3

Gene ERGIC2, Length 308 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC2-202ENST00000546509 HIST1H2BDP58876 126 aa1.69□□□□□ -2.14
ERGIC2-202ENST00000546509 HIST1H2BCP62807 126 aa1.69□□□□□ -2.14
ERGIC2-202ENST00000546509 HBA1P69905 142 aa1.69□□□□□ -2.14
ERGIC2-202ENST00000546509 KISS1Q15726 138 aa1.69□□□□□ -2.14
ERGIC2-202ENST00000546509 HIST2H2BEQ16778 126 aa1.69□□□□□ -2.14
ERGIC2-202ENST00000546509 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.69□□□□□ -2.14
ERGIC2-202ENST00000546509 PTRHD1Q6GMV3 140 aaKnown RBP1.69□□□□□ -2.14
ERGIC2-202ENST00000546509 TMEM86BQ8N661 226 aa1.69□□□□□ -2.14
ERGIC2-202ENST00000546509 MRPL30Q8TCC3 161 aaKnown RBP1.69□□□□□ -2.14
ERGIC2-202ENST00000546509 HIST1H2BHQ93079 126 aa1.69□□□□□ -2.14
ERGIC2-202ENST00000546509 IMP4Q96G21 291 aaKnown RBP1.69□□□□□ -2.14
ERGIC2-202ENST00000546509 HIST1H2BNQ99877 126 aa1.69□□□□□ -2.14
ERGIC2-202ENST00000546509 HIST1H2BMQ99879 126 aa1.69□□□□□ -2.14
ERGIC2-202ENST00000546509 RETNLBQ9BQ08 111 aa1.69□□□□□ -2.14
ERGIC2-202ENST00000546509 MED9Q9NWA0 146 aa1.69□□□□□ -2.14
ERGIC2-202ENST00000546509 V9GYY5 206 aaPredicted RBP1.69□□□□□ -2.14
ERGIC2-202ENST00000546509 MED13Q9UHV7 2174 aa1.69□□□□□ -2.14
ERGIC2-202ENST00000546509 TONSLQ96HA7 1378 aa1.69□□□□□ -2.14
ERGIC2-202ENST00000546509 CPAMD8Q8IZJ3 1885 aa1.69□□□□□ -2.14
ERGIC2-202ENST00000546509 SETD5Q9C0A6 1442 aa1.68□□□□□ -2.14
ERGIC2-202ENST00000546509 NIPSNAP2O75323 286 aa1.68□□□□□ -2.14
ERGIC2-202ENST00000546509 G6PCP35575 357 aa1.68□□□□□ -2.14
ERGIC2-202ENST00000546509 OR2F1Q13607 317 aa1.68□□□□□ -2.14
ERGIC2-202ENST00000546509 NUMA1Q14980 2115 aa1.68□□□□□ -2.14
ERGIC2-202ENST00000546509 RPL22L1Q6P5R6 122 aaKnown RBP1.68□□□□□ -2.14
ERGIC2-202ENST00000546509 C20orf196Q8IYI0 205 aa1.68□□□□□ -2.14
ERGIC2-202ENST00000546509 ZNF439Q8NDP4 499 aa1.68□□□□□ -2.14
ERGIC2-202ENST00000546509 RASSF5Q8WWW0 418 aa1.68□□□□□ -2.14
ERGIC2-202ENST00000546509 SERPINI1Q99574 410 aa1.68□□□□□ -2.14
ERGIC2-202ENST00000546509 GINS4Q9BRT9 223 aa1.68□□□□□ -2.14
ERGIC2-202ENST00000546509 COMMD5Q9GZQ3 224 aa1.68□□□□□ -2.14
ERGIC2-202ENST00000546509 PKIGQ9Y2B9 76 aa1.68□□□□□ -2.14
ERGIC2-202ENST00000546509 MALRD1Q5VYJ5 2156 aa1.68□□□□□ -2.14
ERGIC2-202ENST00000546509 KMT2BQ9UMN6 2715 aaPredicted RBP1.68□□□□□ -2.14
ERGIC2-202ENST00000546509 PTPRBP23467 1997 aa1.67□□□□□ -2.14
ERGIC2-202ENST00000546509 HLA-DRB1P01911 266 aa1.67□□□□□ -2.14
ERGIC2-202ENST00000546509 SULT1A1P50225 295 aa1.67□□□□□ -2.14
ERGIC2-202ENST00000546509 ZNF80P51504 273 aaPredicted RBP1.67□□□□□ -2.14
ERGIC2-202ENST00000546509 PSME3P61289 254 aa1.67□□□□□ -2.14
ERGIC2-202ENST00000546509 STX5Q13190 355 aa1.67□□□□□ -2.14
ERGIC2-202ENST00000546509 LCN15Q6UWW0 184 aa1.67□□□□□ -2.14
ERGIC2-202ENST00000546509 Q8N2B8 174 aa1.67□□□□□ -2.14
ERGIC2-202ENST00000546509 LINC00471Q8N535 108 aa1.67□□□□□ -2.14
ERGIC2-202ENST00000546509 MNS1Q8NEH6 495 aa1.67□□□□□ -2.14
ERGIC2-202ENST00000546509 PPP1R2P1Q96PQ5 205 aa1.67□□□□□ -2.14
ERGIC2-202ENST00000546509 SCGB3A1Q96QR1 104 aa1.67□□□□□ -2.14
ERGIC2-202ENST00000546509 OR52E6Q96RD3 313 aa1.67□□□□□ -2.14
ERGIC2-202ENST00000546509 PTPRSQ13332 1948 aa1.67□□□□□ -2.14
ERGIC2-202ENST00000546509 CCDC88CQ9P219 2028 aa1.66□□□□□ -2.14
ERGIC2-202ENST00000546509 IFNA16P05015 189 aa1.66□□□□□ -2.14
ERGIC2-202ENST00000546509 KCNJ8Q15842 424 aa1.66□□□□□ -2.14
ERGIC2-202ENST00000546509 SPANXN3Q5MJ09 141 aa1.66□□□□□ -2.14
ERGIC2-202ENST00000546509 C1orf158Q8N1D5 194 aa1.66□□□□□ -2.14
ERGIC2-202ENST00000546509 ANKRD29Q8N6D5 301 aa1.66□□□□□ -2.14
ERGIC2-202ENST00000546509 DNAJC9Q8WXX5 260 aa1.66□□□□□ -2.14
ERGIC2-202ENST00000546509 PRTFDC1Q9NRG1 225 aa1.66□□□□□ -2.14
ERGIC2-202ENST00000546509 FBXL12Q9NXK8 326 aa1.66□□□□□ -2.14
ERGIC2-202ENST00000546509 RTTNQ86VV8 2226 aa1.66□□□□□ -2.14
ERGIC2-202ENST00000546509 TRAV14DV4A0A0A6YYC5 116 aa1.65□□□□□ -2.15
ERGIC2-202ENST00000546509 IGKV1-5P01602 117 aa1.65□□□□□ -2.15
ERGIC2-202ENST00000546509 DEFA1P59665 94 aa1.65□□□□□ -2.15
ERGIC2-202ENST00000546509 SNRPD2P62316 118 aaKnown RBP1.65□□□□□ -2.15
ERGIC2-202ENST00000546509 ITGB3BPQ13352 177 aaPredicted RBP1.65□□□□□ -2.15
ERGIC2-202ENST00000546509 CDK10Q15131 360 aa1.65□□□□□ -2.15
ERGIC2-202ENST00000546509 SPOPLQ6IQ16 392 aa1.65□□□□□ -2.15
ERGIC2-202ENST00000546509 CLVS1Q8IUQ0 354 aaPredicted RBP1.65□□□□□ -2.15
ERGIC2-202ENST00000546509 LRRC25Q8N386 305 aaPredicted RBP1.65□□□□□ -2.15
ERGIC2-202ENST00000546509 PARD6GQ9BYG4 376 aaPredicted RBP1.65□□□□□ -2.15
ERGIC2-202ENST00000546509 REG4Q9BYZ8 158 aa1.65□□□□□ -2.15
ERGIC2-202ENST00000546509 ULBP3Q9BZM4 244 aa1.65□□□□□ -2.15
ERGIC2-202ENST00000546509 UBAP1Q9NZ09 502 aa1.65□□□□□ -2.15
ERGIC2-202ENST00000546509 CKLFQ9UBR5 152 aa1.65□□□□□ -2.15
ERGIC2-202ENST00000546509 TP73-AS1Q9UF72 201 aa1.65□□□□□ -2.15
ERGIC2-202ENST00000546509 SMARCA4P51532 1647 aa1.65□□□□□ -2.15
ERGIC2-202ENST00000546509 ADCY9O60503 1353 aa1.64□□□□□ -2.15
ERGIC2-202ENST00000546509 FAAHO00519 579 aa1.64□□□□□ -2.15
ERGIC2-202ENST00000546509 ANP32AP39687 249 aaKnown RBP1.64□□□□□ -2.15
ERGIC2-202ENST00000546509 KRTAP10-4P60372 401 aaPredicted RBP1.64□□□□□ -2.15
ERGIC2-202ENST00000546509 LPCAT3Q6P1A2 487 aa1.64□□□□□ -2.15
ERGIC2-202ENST00000546509 DCUN1D1Q96GG9 259 aa1.64□□□□□ -2.15
ERGIC2-202ENST00000546509 C11orf68Q9H3H3 251 aaKnown RBP1.64□□□□□ -2.15
ERGIC2-202ENST00000546509 OR5AC2Q9NZP5 309 aa1.64□□□□□ -2.15
ERGIC2-202ENST00000546509 VPS29Q9UBQ0 182 aa1.64□□□□□ -2.15
ERGIC2-202ENST00000546509 LAMB2P55268 1798 aa1.64□□□□□ -2.15
ERGIC2-202ENST00000546509 GLI3P10071 1580 aa1.64□□□□□ -2.15
ERGIC2-202ENST00000546509 SNAPC4Q5SXM2 1469 aa1.63□□□□□ -2.15
ERGIC2-202ENST00000546509 E2F6O75461 281 aa1.63□□□□□ -2.15
ERGIC2-202ENST00000546509 OR5F1O95221 314 aa1.63□□□□□ -2.15
ERGIC2-202ENST00000546509 CRYZL1O95825 349 aa1.63□□□□□ -2.15
ERGIC2-202ENST00000546509 HIST1H1TP22492 207 aaPredicted RBP1.63□□□□□ -2.15
ERGIC2-202ENST00000546509 RPL5P46777 297 aaKnown RBP1.63□□□□□ -2.15
ERGIC2-202ENST00000546509 ZNF846Q147U1 533 aa1.63□□□□□ -2.15
ERGIC2-202ENST00000546509 IMPG1Q17R60 797 aa1.63□□□□□ -2.15
ERGIC2-202ENST00000546509 DPPA3Q6W0C5 159 aa1.63□□□□□ -2.15
ERGIC2-202ENST00000546509 CCDC42Q96M95 316 aa1.63□□□□□ -2.15
ERGIC2-202ENST00000546509 PARVGQ9HBI0 331 aa1.63□□□□□ -2.15
ERGIC2-202ENST00000546509 GREB1Q4ZG55 1949 aa1.63□□□□□ -2.15
ERGIC2-202ENST00000546509 FUOMA2VDF0 154 aa1.62□□□□□ -2.15
ERGIC2-202ENST00000546509 DPRXA6NFQ7 191 aa1.62□□□□□ -2.15
ERGIC2-202ENST00000546509 CHP2O43745 196 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms