RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 LGI3Q8N145 548 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 LRTM2Q8N967 370 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 SGMS2Q8NHU3 365 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 COQ8AQ8NI60 647 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 WIPF2Q8TF74 440 aaPredicted RBP4.96□□□□□ -1.62
PRKDC-211ENST00000546304 CHPT1Q8WUD6 406 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 PHB2Q99623 299 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 SPIN2AQ99865 258 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 SPIN2BQ9BPZ2 258 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 QTRT1Q9BXR0 403 aaKnown RBP4.96□□□□□ -1.62
PRKDC-211ENST00000546304 COMMD5Q9GZQ3 224 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 TMEM14BQ9NUH8 114 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 SHPKQ9UHJ6 478 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 LINC00527Q9UJ94 153 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 PRNDQ9UKY0 176 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 FOXA2Q9Y261 457 aaPredicted RBP4.96□□□□□ -1.62
PRKDC-211ENST00000546304 NSG2Q9Y328 171 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 WSB1Q9Y6I7 421 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 NOTCH3Q9UM47 2321 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 A0A1B0GW64 132 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 A0A1W2PN81 502 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 TEX22C9J3V5 150 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 RBMXL2O75526 392 aaKnown RBP4.95□□□□□ -1.62
PRKDC-211ENST00000546304 OPN1MWP04001 364 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 IL6RP08887 468 aaPredicted RBP4.95□□□□□ -1.62
PRKDC-211ENST00000546304 APELAP0DMC3 54 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 OPN1MW2P0DN77 364 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 OPN1MW3P0DN78 364 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 EGR2P11161 476 aaPredicted RBP4.95□□□□□ -1.62
PRKDC-211ENST00000546304 MYOD1P15172 320 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 CHRNA7P36544 502 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 IZUMO4Q1ZYL8 232 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 RGS21Q2M5E4 152 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 KHDC1LQ5JSQ8 128 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 THOC7Q6I9Y2 204 aaKnown RBP4.95□□□□□ -1.62
PRKDC-211ENST00000546304 UNQ5815/PRO19632Q6UWF5 114 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 C10orf99Q6UWK7 81 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 LYZL2Q7Z4W2 148 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 ZNF329Q86UD4 541 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 ZNF429Q86V71 674 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 DUSP18Q8NEJ0 188 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 LFNGQ8NES3 379 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 OR4X2Q8NGF9 303 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 OR52B4Q8NGK2 314 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 OR5B3Q8NH48 314 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 OR4A16Q8NH70 328 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 MITD1Q8WV92 249 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 LSM10Q969L4 123 aaKnown RBP4.95□□□□□ -1.62
PRKDC-211ENST00000546304 FYTTD1Q96QD9 318 aaKnown RBP4.95□□□□□ -1.62
PRKDC-211ENST00000546304 SEC22CQ9BRL7 303 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 GON7Q9BXV9 100 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 ALX4Q9H161 411 aaPredicted RBP4.95□□□□□ -1.62
PRKDC-211ENST00000546304 CACNG5Q9UF02 275 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 OR51B2Q9Y5P1 312 aa4.95□□□□□ -1.62
PRKDC-211ENST00000546304 NBEAL1Q6ZS30 2694 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 A0A0B4J293 547 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 IGLC7A0M8Q6 106 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 HMX3A6NHT5 357 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 MSGN1A6NI15 193 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 CGB1A6NKQ9 187 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 INMT-MINDY4F8WBC2 141 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 ST8SIA3O43173 380 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 SOX15O60248 233 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 PRAF2O60831 178 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 IGHG4P01861 327 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 IL5P05113 134 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 SULT1A3P0DMM9 295 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 SULT1A4P0DMN0 295 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 AREGP15514 252 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 SPNP16150 400 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 PPIFP30405 207 aaKnown RBP4.94□□□□□ -1.62
PRKDC-211ENST00000546304 KRTAP10-3P60369 221 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 PRCDQ00LT1 54 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 TMEM267Q0VDI3 215 aaPredicted RBP4.94□□□□□ -1.62
PRKDC-211ENST00000546304 SMCO1Q147U7 214 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 AARDQ4LEZ3 155 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 AKIRIN2Q53H80 203 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 CXorf66Q5JRM2 361 aaPredicted RBP4.94□□□□□ -1.62
PRKDC-211ENST00000546304 ASPHD1Q5U4P2 390 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 CENPVQ7Z7K6 275 aaPredicted RBP4.94□□□□□ -1.62
PRKDC-211ENST00000546304 COMMD1Q8N668 190 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 C3orf56Q8N813 242 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 C11orf44Q8N8P7 122 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 MINDY2Q8NBR6 621 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 OR5AU1Q8NGC0 362 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 OR5M8Q8NGP6 311 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 OR1L8Q8NGR8 309 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 FAM110DQ8TAY7 271 aaPredicted RBP4.94□□□□□ -1.62
PRKDC-211ENST00000546304 ZNF431Q8TF32 576 aaPredicted RBP4.94□□□□□ -1.62
PRKDC-211ENST00000546304 CITED1Q99966 193 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 SRSF8Q9BRL6 282 aaKnown RBP4.94□□□□□ -1.62
PRKDC-211ENST00000546304 MARVELD1Q9BSK0 173 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 PDCD10Q9BUL8 212 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 HINT2Q9BX68 163 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 PLEKHA3Q9HB20 300 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 COA4Q9NYJ1 87 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 FKBP11Q9NYL4 201 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 ZNF257Q9Y2Q1 563 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 TMED3Q9Y3Q3 217 aa4.94□□□□□ -1.62
PRKDC-211ENST00000546304 NOTCH1P46531 2555 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms