RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 DEFB131AP59861 70 aa10.59□□□□□ -0.71
RTN3-214ENST00000545432 MORN3Q6PF18 240 aaPredicted RBP10.59□□□□□ -0.71
RTN3-214ENST00000545432 CMTM3Q96MX0 182 aa10.59□□□□□ -0.71
RTN3-214ENST00000545432 TXN2Q99757 166 aa10.59□□□□□ -0.71
RTN3-214ENST00000545432 NXF2Q9GZY0 626 aaKnown RBP10.59□□□□□ -0.71
RTN3-214ENST00000545432 ACOT13Q9NPJ3 140 aa10.59□□□□□ -0.71
RTN3-214ENST00000545432 CCL28Q9NRJ3 127 aa10.59□□□□□ -0.71
RTN3-214ENST00000545432 TMEM140Q9NV12 185 aa10.59□□□□□ -0.71
RTN3-214ENST00000545432 ANXA10Q9UJ72 324 aa10.59□□□□□ -0.71
RTN3-214ENST00000545432 APOBP04114 4563 aaKnown RBP10.58□□□□□ -0.72
RTN3-214ENST00000545432 DNAH5Q8TE73 4624 aa10.58□□□□□ -0.72
RTN3-214ENST00000545432 DEFB131BA0A096LNP1 70 aa10.58□□□□□ -0.72
RTN3-214ENST00000545432 IGHV3-21A0A0B4J1V1 117 aa10.58□□□□□ -0.72
RTN3-214ENST00000545432 TCF24Q7RTU0 167 aa10.58□□□□□ -0.72
RTN3-214ENST00000545432 GBGT1Q8N5D6 347 aa10.58□□□□□ -0.72
RTN3-214ENST00000545432 OR1L8Q8NGR8 309 aa10.58□□□□□ -0.72
RTN3-214ENST00000545432 LSM10Q969L4 123 aaKnown RBP10.58□□□□□ -0.72
RTN3-214ENST00000545432 NDUFAF3Q9BU61 184 aa10.58□□□□□ -0.72
RTN3-214ENST00000545432 MS4A6AQ9H2W1 248 aa10.58□□□□□ -0.72
RTN3-214ENST00000545432 PTGES3LE9PB15 166 aa10.57□□□□□ -0.72
RTN3-214ENST00000545432 I3L2K1 104 aa10.57□□□□□ -0.72
RTN3-214ENST00000545432 NUPL2O15504 423 aaKnown RBP10.57□□□□□ -0.72
RTN3-214ENST00000545432 SSX5O60225 188 aa10.57□□□□□ -0.72
RTN3-214ENST00000545432 SPP1P10451 314 aa10.57□□□□□ -0.72
RTN3-214ENST00000545432 OR10A3P58181 314 aa10.57□□□□□ -0.72
RTN3-214ENST00000545432 MLLT11Q13015 90 aaPredicted RBP10.57□□□□□ -0.72
RTN3-214ENST00000545432 FAM24BQ8N5W8 94 aa10.57□□□□□ -0.72
RTN3-214ENST00000545432 DUSP18Q8NEJ0 188 aa10.57□□□□□ -0.72
RTN3-214ENST00000545432 OR1P1Q8NH06 330 aa10.57□□□□□ -0.72
RTN3-214ENST00000545432 COMMD9Q9P000 198 aa10.57□□□□□ -0.72
RTN3-214ENST00000545432 CELA1Q9UNI1 258 aa10.57□□□□□ -0.72
RTN3-214ENST00000545432 IGKV3-7A0A075B6H7 116 aa10.56□□□□□ -0.72
RTN3-214ENST00000545432 IGHV3-49A0A0A0MS15 119 aa10.56□□□□□ -0.72
RTN3-214ENST00000545432 PDCD5O14737 125 aa10.56□□□□□ -0.72
RTN3-214ENST00000545432 TNFSF12O43508 249 aa10.56□□□□□ -0.72
RTN3-214ENST00000545432 C4BPBP20851 252 aa10.56□□□□□ -0.72
RTN3-214ENST00000545432 Q56UQ5 140 aa10.56□□□□□ -0.72
RTN3-214ENST00000545432 LEMD1Q68G75 181 aa10.56□□□□□ -0.72
RTN3-214ENST00000545432 Q6ZRM9 215 aa10.56□□□□□ -0.72
RTN3-214ENST00000545432 STHQ8IWL8 128 aa10.56□□□□□ -0.72
RTN3-214ENST00000545432 GRAMD2BQ96HH9 432 aa10.56□□□□□ -0.72
RTN3-214ENST00000545432 FAM210BQ96KR6 192 aa10.56□□□□□ -0.72
RTN3-214ENST00000545432 SCRT1Q9BWW7 348 aa10.56□□□□□ -0.72
RTN3-214ENST00000545432 DUSP21Q9H596 190 aa10.56□□□□□ -0.72
RTN3-214ENST00000545432 SULT1C2O00338 296 aa10.55□□□□□ -0.72
RTN3-214ENST00000545432 APOHP02749 345 aaPredicted RBP10.55□□□□□ -0.72
RTN3-214ENST00000545432 MFAP4P55083 255 aa10.55□□□□□ -0.72
RTN3-214ENST00000545432 Q8N1X5 172 aa10.55□□□□□ -0.72
RTN3-214ENST00000545432 CENPSQ8N2Z9 138 aa10.55□□□□□ -0.72
RTN3-214ENST00000545432 UBAC2Q8NBM4 344 aa10.55□□□□□ -0.72
RTN3-214ENST00000545432 NUDCD2Q8WVJ2 157 aa10.55□□□□□ -0.72
RTN3-214ENST00000545432 ST8SIA2Q92186 375 aa10.55□□□□□ -0.72
RTN3-214ENST00000545432 ATG5Q9H1Y0 275 aa10.55□□□□□ -0.72
RTN3-214ENST00000545432 TBC1D24Q9ULP9 559 aa10.55□□□□□ -0.72
RTN3-214ENST00000545432 IGHV3OR16-13A0A075B7E8 117 aa10.54□□□□□ -0.72
RTN3-214ENST00000545432 IGHV3-74A0A0B4J1X5 117 aa10.54□□□□□ -0.72
RTN3-214ENST00000545432 K7EQG2 157 aa10.54□□□□□ -0.72
RTN3-214ENST00000545432 YIF1AO95070 293 aa10.54□□□□□ -0.72
RTN3-214ENST00000545432 PPYP01298 95 aa10.54□□□□□ -0.72
RTN3-214ENST00000545432 FCGR2CP31995 323 aa10.54□□□□□ -0.72
RTN3-214ENST00000545432 CATR1Q13166 79 aa10.54□□□□□ -0.72
RTN3-214ENST00000545432 RNF212Q495C1 297 aa10.54□□□□□ -0.72
RTN3-214ENST00000545432 SOHLH1Q5JUK2 328 aa10.54□□□□□ -0.72
RTN3-214ENST00000545432 TOMM20LQ6UXN7 152 aa10.54□□□□□ -0.72
RTN3-214ENST00000545432 OR13F1Q8NGS4 319 aa10.54□□□□□ -0.72
RTN3-214ENST00000545432 SECTM1Q8WVN6 248 aa10.54□□□□□ -0.72
RTN3-214ENST00000545432 MARCH11A6NNE9 402 aa10.53□□□□□ -0.72
RTN3-214ENST00000545432 DNASE2O00115 360 aaPredicted RBP10.53□□□□□ -0.72
RTN3-214ENST00000545432 HSMCR30P0CW71 290 aa10.53□□□□□ -0.72
RTN3-214ENST00000545432 ZNF818PQ6ZRF7 136 aa10.53□□□□□ -0.72
RTN3-214ENST00000545432 MAPKAPK5-AS1Q8N8E1 139 aa10.53□□□□□ -0.72
RTN3-214ENST00000545432 ZNF114Q8NC26 417 aa10.53□□□□□ -0.72
RTN3-214ENST00000545432 DMBX1Q8NFW5 382 aa10.53□□□□□ -0.72
RTN3-214ENST00000545432 MGLLQ99685 303 aa10.53□□□□□ -0.72
RTN3-214ENST00000545432 GINS3Q9BRX5 216 aa10.53□□□□□ -0.72
RTN3-214ENST00000545432 TMEM14BQ9NUH8 114 aa10.53□□□□□ -0.72
RTN3-214ENST00000545432 TMEM235A6NFC5 223 aa10.52□□□□□ -0.73
RTN3-214ENST00000545432 ST8SIA3O43173 380 aa10.52□□□□□ -0.73
RTN3-214ENST00000545432 SCGNO76038 276 aa10.52□□□□□ -0.73
RTN3-214ENST00000545432 RAB3BP20337 219 aa10.52□□□□□ -0.73
RTN3-214ENST00000545432 NPY1RP25929 384 aa10.52□□□□□ -0.73
RTN3-214ENST00000545432 HOGA1Q86XE5 327 aa10.52□□□□□ -0.73
RTN3-214ENST00000545432 TMEM56Q96MV1 263 aa10.52□□□□□ -0.73
RTN3-214ENST00000545432 SLC5A7Q9GZV3 580 aa10.52□□□□□ -0.73
RTN3-214ENST00000545432 ZFAND3Q9H8U3 227 aa10.52□□□□□ -0.73
RTN3-214ENST00000545432 SCN3BQ9NY72 215 aa10.52□□□□□ -0.73
RTN3-214ENST00000545432 OR51B2Q9Y5P1 312 aa10.52□□□□□ -0.73
RTN3-214ENST00000545432 IFNA10P01566 189 aa10.51□□□□□ -0.73
RTN3-214ENST00000545432 IFNA21P01568 189 aa10.51□□□□□ -0.73
RTN3-214ENST00000545432 IFNA17P01571 189 aa10.51□□□□□ -0.73
RTN3-214ENST00000545432 GNRHRP30968 328 aa10.51□□□□□ -0.73
RTN3-214ENST00000545432 OGFRL1Q5TC84 451 aaPredicted RBP10.51□□□□□ -0.73
RTN3-214ENST00000545432 C1orf134Q5TEV5 83 aa10.51□□□□□ -0.73
RTN3-214ENST00000545432 UBE2UQ5VVX9 321 aa10.51□□□□□ -0.73
RTN3-214ENST00000545432 BEST4Q8NFU0 473 aa10.51□□□□□ -0.73
RTN3-214ENST00000545432 DCANP1Q8TF63 244 aa10.51□□□□□ -0.73
RTN3-214ENST00000545432 SLC25A46Q96AG3 418 aa10.51□□□□□ -0.73
RTN3-214ENST00000545432 NEU1Q99519 415 aa10.51□□□□□ -0.73
RTN3-214ENST00000545432 FKBP11Q9NYL4 201 aa10.51□□□□□ -0.73
RTN3-214ENST00000545432 IGLV2-18A0A075B6J9 118 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms