RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 FAM106AQ4KMX7 169 aa11.99□□□□□ -0.49
CCDC78-216ENST00000544996 GPHB5Q86YW7 130 aa11.99□□□□□ -0.49
CCDC78-216ENST00000544996 Q8N402 240 aa11.99□□□□□ -0.49
CCDC78-216ENST00000544996 PDCD10Q9BUL8 212 aa11.99□□□□□ -0.49
CCDC78-216ENST00000544996 TMEM222Q9H0R3 208 aa11.99□□□□□ -0.49
CCDC78-216ENST00000544996 C5orf66Q9H5L9 145 aa11.99□□□□□ -0.49
CCDC78-216ENST00000544996 NAA60Q9H7X0 242 aa11.99□□□□□ -0.49
CCDC78-216ENST00000544996 GPR132Q9UNW8 380 aa11.99□□□□□ -0.49
CCDC78-216ENST00000544996 DMRT1Q9Y5R6 373 aa11.99□□□□□ -0.49
CCDC78-216ENST00000544996 SMAD5-AS1Q9Y6J3 95 aa11.99□□□□□ -0.49
CCDC78-216ENST00000544996 V9GYH0 126 aa11.99□□□□□ -0.49
CCDC78-216ENST00000544996 DNAH3Q8TD57 4116 aa11.99□□□□□ -0.49
CCDC78-216ENST00000544996 LGALS9O00182 355 aa11.98□□□□□ -0.49
CCDC78-216ENST00000544996 IGKV1-5P01602 117 aa11.98□□□□□ -0.49
CCDC78-216ENST00000544996 OR5AC1P0C628 307 aa11.98□□□□□ -0.49
CCDC78-216ENST00000544996 GPR183P32249 361 aa11.98□□□□□ -0.49
CCDC78-216ENST00000544996 ERHP84090 104 aaKnown RBP11.98□□□□□ -0.49
CCDC78-216ENST00000544996 PRCDQ00LT1 54 aa11.98□□□□□ -0.49
CCDC78-216ENST00000544996 DHODHQ02127 395 aa11.98□□□□□ -0.49
CCDC78-216ENST00000544996 SPANXN2Q5MJ10 180 aa11.98□□□□□ -0.49
CCDC78-216ENST00000544996 HAPLN4Q86UW8 402 aa11.98□□□□□ -0.49
CCDC78-216ENST00000544996 SGPP2Q8IWX5 399 aa11.98□□□□□ -0.49
CCDC78-216ENST00000544996 TOMM5Q8N4H5 51 aa11.98□□□□□ -0.49
CCDC78-216ENST00000544996 OR1P1Q8NH06 330 aa11.98□□□□□ -0.49
CCDC78-216ENST00000544996 ZNF502Q8TBZ5 544 aa11.98□□□□□ -0.49
CCDC78-216ENST00000544996 PLEKHA3Q9HB20 300 aa11.98□□□□□ -0.49
CCDC78-216ENST00000544996 KCNIP3Q9Y2W7 256 aa11.98□□□□□ -0.49
CCDC78-216ENST00000544996 ZNF320A2RRD8 509 aa11.97□□□□□ -0.49
CCDC78-216ENST00000544996 CDS2O95674 445 aa11.97□□□□□ -0.49
CCDC78-216ENST00000544996 IFNA17P01571 189 aa11.97□□□□□ -0.49
CCDC78-216ENST00000544996 IZUMO4Q1ZYL8 232 aa11.97□□□□□ -0.49
CCDC78-216ENST00000544996 LCN12Q6JVE5 192 aa11.97□□□□□ -0.49
CCDC78-216ENST00000544996 PLET1Q6UQ28 207 aa11.97□□□□□ -0.49
CCDC78-216ENST00000544996 CCDC190Q86UF4 302 aa11.97□□□□□ -0.49
CCDC78-216ENST00000544996 OR2C3Q8N628 320 aa11.97□□□□□ -0.49
CCDC78-216ENST00000544996 GLYATL2Q8WU03 294 aa11.97□□□□□ -0.49
CCDC78-216ENST00000544996 NDUFA13Q9P0J0 144 aa11.97□□□□□ -0.49
CCDC78-216ENST00000544996 A0A0B4J293 547 aa11.96□□□□□ -0.49
CCDC78-216ENST00000544996 CRYM-AS1A6NIL9 109 aa11.96□□□□□ -0.49
CCDC78-216ENST00000544996 P0C879 139 aa11.96□□□□□ -0.49
CCDC78-216ENST00000544996 ETV6P41212 452 aa11.96□□□□□ -0.49
CCDC78-216ENST00000544996 MFAP2P55001 183 aa11.96□□□□□ -0.49
CCDC78-216ENST00000544996 KLF9Q13886 244 aaPredicted RBP11.96□□□□□ -0.49
CCDC78-216ENST00000544996 FAM219AQ8IW50 185 aa11.96□□□□□ -0.49
CCDC78-216ENST00000544996 SLC35G3Q8N808 338 aa11.96□□□□□ -0.49
CCDC78-216ENST00000544996 DYNLRB2Q8TF09 96 aa11.96□□□□□ -0.49
CCDC78-216ENST00000544996 DEDD2Q8WXF8 326 aa11.96□□□□□ -0.49
CCDC78-216ENST00000544996 RBPMSQ93062 196 aaKnown RBP11.96□□□□□ -0.49
CCDC78-216ENST00000544996 ATP6V0BQ99437 205 aa11.96□□□□□ -0.49
CCDC78-216ENST00000544996 ZC4H2Q9NQZ6 224 aa11.96□□□□□ -0.49
CCDC78-216ENST00000544996 C21orf62Q9NYP8 219 aa11.96□□□□□ -0.49
CCDC78-216ENST00000544996 C2orf70A6NJV1 201 aa11.95□□□□□ -0.5
CCDC78-216ENST00000544996 ST8SIA3O43173 380 aa11.95□□□□□ -0.5
CCDC78-216ENST00000544996 SNCAP37840 140 aa11.95□□□□□ -0.5
CCDC78-216ENST00000544996 ZNF79Q15937 498 aa11.95□□□□□ -0.5
CCDC78-216ENST00000544996 ZNF114Q8NC26 417 aa11.95□□□□□ -0.5
CCDC78-216ENST00000544996 OR2K2Q8NGT1 345 aa11.95□□□□□ -0.5
CCDC78-216ENST00000544996 SCARB1Q8WTV0 552 aa11.95□□□□□ -0.5
CCDC78-216ENST00000544996 TRIM63Q969Q1 353 aa11.95□□□□□ -0.5
CCDC78-216ENST00000544996 BSCL2Q96G97 398 aaPredicted RBP11.95□□□□□ -0.5
CCDC78-216ENST00000544996 PALMDQ9NP74 551 aa11.95□□□□□ -0.5
CCDC78-216ENST00000544996 GAR1Q9NY12 217 aaKnown RBP11.95□□□□□ -0.5
CCDC78-216ENST00000544996 IGHV3-21A0A0B4J1V1 117 aa11.94□□□□□ -0.5
CCDC78-216ENST00000544996 OR2T8A6NH00 312 aa11.94□□□□□ -0.5
CCDC78-216ENST00000544996 TGOLN2O43493 480 aa11.94□□□□□ -0.5
CCDC78-216ENST00000544996 NHLRC4P0CG21 123 aaPredicted RBP11.94□□□□□ -0.5
CCDC78-216ENST00000544996 FOLR2P14207 255 aa11.94□□□□□ -0.5
CCDC78-216ENST00000544996 AKR1C4P17516 323 aa11.94□□□□□ -0.5
CCDC78-216ENST00000544996 SUB1P53999 127 aaKnown RBP eCLIP11.94□□□□□ -0.5
CCDC78-216ENST00000544996 Q56UQ5 140 aa11.94□□□□□ -0.5
CCDC78-216ENST00000544996 TMEM268Q5VZI3 342 aa11.94□□□□□ -0.5
CCDC78-216ENST00000544996 SPSB3Q6PJ21 355 aa11.94□□□□□ -0.5
CCDC78-216ENST00000544996 SELENOHQ8IZQ5 122 aaKnown RBP11.94□□□□□ -0.5
CCDC78-216ENST00000544996 UBAC2Q8NBM4 344 aa11.94□□□□□ -0.5
CCDC78-216ENST00000544996 MISP3Q96FF7 219 aa11.94□□□□□ -0.5
CCDC78-216ENST00000544996 GALNT14Q96FL9 552 aa11.94□□□□□ -0.5
CCDC78-216ENST00000544996 ENY2Q9NPA8 101 aa11.94□□□□□ -0.5
CCDC78-216ENST00000544996 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.94□□□□□ -0.5
CCDC78-216ENST00000544996 TECRQ9NZ01 308 aaKnown RBP11.94□□□□□ -0.5
CCDC78-216ENST00000544996 TMEM56-RWDD3S4R434 201 aa11.94□□□□□ -0.5
CCDC78-216ENST00000544996 A8MWP6 167 aa11.93□□□□□ -0.5
CCDC78-216ENST00000544996 INS-IGF2F8WCM5 200 aa11.93□□□□□ -0.5
CCDC78-216ENST00000544996 K7EIM0 57 aa11.93□□□□□ -0.5
CCDC78-216ENST00000544996 ANXA3P12429 323 aa11.93□□□□□ -0.5
CCDC78-216ENST00000544996 CBLN1P23435 193 aa11.93□□□□□ -0.5
CCDC78-216ENST00000544996 INPP1P49441 399 aa11.93□□□□□ -0.5
CCDC78-216ENST00000544996 HOXA1P49639 335 aaPredicted RBP11.93□□□□□ -0.5
CCDC78-216ENST00000544996 SPINK9Q5DT21 86 aa11.93□□□□□ -0.5
CCDC78-216ENST00000544996 GTSCR1Q86UQ5 136 aa11.93□□□□□ -0.5
CCDC78-216ENST00000544996 IL22RA2Q969J5 263 aa11.93□□□□□ -0.5
CCDC78-216ENST00000544996 UFC1Q9Y3C8 167 aa11.93□□□□□ -0.5
CCDC78-216ENST00000544996 PIGBOS1A0A0B4J2F0 54 aa11.92□□□□□ -0.5
CCDC78-216ENST00000544996 A0A0G2JRQ6 117 aa11.92□□□□□ -0.5
CCDC78-216ENST00000544996 DEFB114Q30KQ6 69 aa11.92□□□□□ -0.5
CCDC78-216ENST00000544996 CD300EQ496F6 205 aaPredicted RBP11.92□□□□□ -0.5
CCDC78-216ENST00000544996 ZNF57Q68EA5 555 aaPredicted RBP11.92□□□□□ -0.5
CCDC78-216ENST00000544996 ADAMTSL5Q6ZMM2 481 aa11.92□□□□□ -0.5
CCDC78-216ENST00000544996 OR52E5Q8NH55 327 aa11.92□□□□□ -0.5
CCDC78-216ENST00000544996 LHFPL5Q8TAF8 219 aa11.92□□□□□ -0.5
CCDC78-216ENST00000544996 MARC2Q969Z3 335 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms