RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 ZNF585BQ52M93 769 aa9.44□□□□□ -0.9
USP28-212ENST00000544750 CTRB2Q6GPI1 263 aa9.44□□□□□ -0.9
USP28-212ENST00000544750 SLC38A6Q8IZM9 456 aa9.44□□□□□ -0.9
USP28-212ENST00000544750 SPAG16Q8N0X2 631 aa9.44□□□□□ -0.9
USP28-212ENST00000544750 OR6F1Q8NGZ6 308 aa9.44□□□□□ -0.9
USP28-212ENST00000544750 OR51H1Q8NH63 302 aa9.44□□□□□ -0.9
USP28-212ENST00000544750 TMEM167AQ8TBQ9 72 aa9.44□□□□□ -0.9
USP28-212ENST00000544750 EEF1AKMT3Q96AZ1 226 aa9.44□□□□□ -0.9
USP28-212ENST00000544750 MAP6D1Q9H9H5 199 aa9.44□□□□□ -0.9
USP28-212ENST00000544750 IGLV11-55A0A075B6I3 123 aa9.43□□□□□ -0.9
USP28-212ENST00000544750 MFSD2BA6NFX1 497 aa9.43□□□□□ -0.9
USP28-212ENST00000544750 PGLYRP1O75594 196 aaPredicted RBP9.43□□□□□ -0.9
USP28-212ENST00000544750 CD74P04233 296 aa9.43□□□□□ -0.9
USP28-212ENST00000544750 CD3DP04234 171 aa9.43□□□□□ -0.9
USP28-212ENST00000544750 RLN1P04808 185 aa9.43□□□□□ -0.9
USP28-212ENST00000544750 CLEC3BP05452 202 aa9.43□□□□□ -0.9
USP28-212ENST00000544750 MED14OSP0DP75 135 aa9.43□□□□□ -0.9
USP28-212ENST00000544750 AREGP15514 252 aa9.43□□□□□ -0.9
USP28-212ENST00000544750 RPL27AP46776 148 aaKnown RBP9.43□□□□□ -0.9
USP28-212ENST00000544750 TCTAP57738 103 aa9.43□□□□□ -0.9
USP28-212ENST00000544750 NANOS2P60321 138 aaKnown RBP9.43□□□□□ -0.9
USP28-212ENST00000544750 CATR1Q13166 79 aa9.43□□□□□ -0.9
USP28-212ENST00000544750 POU2AF1Q16633 256 aa9.43□□□□□ -0.9
USP28-212ENST00000544750 LHFPL1Q86WI0 220 aa9.43□□□□□ -0.9
USP28-212ENST00000544750 OR4D10Q8NGI6 311 aa9.43□□□□□ -0.9
USP28-212ENST00000544750 SMIM4Q8WVI0 70 aa9.43□□□□□ -0.9
USP28-212ENST00000544750 GALNT14Q96FL9 552 aa9.43□□□□□ -0.9
USP28-212ENST00000544750 OR2A7Q96R45 310 aa9.43□□□□□ -0.9
USP28-212ENST00000544750 SOSTQ9BQB4 213 aa9.43□□□□□ -0.9
USP28-212ENST00000544750 ZNF436Q9C0F3 470 aaPredicted RBP9.43□□□□□ -0.9
USP28-212ENST00000544750 C6orf62Q9GZU0 229 aaPredicted RBP9.43□□□□□ -0.9
USP28-212ENST00000544750 APLNQ9ULZ1 77 aa9.43□□□□□ -0.9
USP28-212ENST00000544750 TRBV7-1A0A0A6YYK4 115 aa9.42□□□□□ -0.9
USP28-212ENST00000544750 CGB1A6NKQ9 187 aa9.42□□□□□ -0.9
USP28-212ENST00000544750 GPR31O00270 319 aa9.42□□□□□ -0.9
USP28-212ENST00000544750 CTDSPLO15194 276 aa9.42□□□□□ -0.9
USP28-212ENST00000544750 MYOD1P15172 320 aa9.42□□□□□ -0.9
USP28-212ENST00000544750 RPL35AP18077 110 aaKnown RBP9.42□□□□□ -0.9
USP28-212ENST00000544750 UCP3P55916 312 aa9.42□□□□□ -0.9
USP28-212ENST00000544750 TSPAN5P62079 268 aa9.42□□□□□ -0.9
USP28-212ENST00000544750 SSX9Q7RTT3 188 aa9.42□□□□□ -0.9
USP28-212ENST00000544750 TMEM229BQ8NBD8 167 aa9.42□□□□□ -0.9
USP28-212ENST00000544750 C15orf40Q8WUR7 153 aa9.42□□□□□ -0.9
USP28-212ENST00000544750 FCAMRQ8WWV6 532 aa9.42□□□□□ -0.9
USP28-212ENST00000544750 BORCS5Q969J3 196 aa9.42□□□□□ -0.9
USP28-212ENST00000544750 DIRAS2Q96HU8 199 aa9.42□□□□□ -0.9
USP28-212ENST00000544750 C11orf68Q9H3H3 251 aaKnown RBP9.42□□□□□ -0.9
USP28-212ENST00000544750 BET1LQ9NYM9 111 aa9.42□□□□□ -0.9
USP28-212ENST00000544750 TRAV3A0A0B4J244 114 aa9.41□□□□□ -0.9
USP28-212ENST00000544750 HPRT1P00492 218 aa9.41□□□□□ -0.9
USP28-212ENST00000544750 HRASP01112 189 aa9.41□□□□□ -0.9
USP28-212ENST00000544750 HIST1H1BP16401 226 aaKnown RBP9.41□□□□□ -0.9
USP28-212ENST00000544750 TBPP20226 339 aa9.41□□□□□ -0.9
USP28-212ENST00000544750 TNFSF8P32971 234 aa9.41□□□□□ -0.9
USP28-212ENST00000544750 MAS1LP35410 378 aa9.41□□□□□ -0.9
USP28-212ENST00000544750 TAS2R31P59538 309 aa9.41□□□□□ -0.9
USP28-212ENST00000544750 MRPS10P82664 201 aaKnown RBP9.41□□□□□ -0.9
USP28-212ENST00000544750 IL18Q14116 193 aa9.41□□□□□ -0.9
USP28-212ENST00000544750 PHLDA2Q53GA4 152 aa9.41□□□□□ -0.9
USP28-212ENST00000544750 RNASE10Q5GAN6 216 aaKnown RBP9.41□□□□□ -0.9
USP28-212ENST00000544750 LINC00336Q6ZUF6 198 aa9.41□□□□□ -0.9
USP28-212ENST00000544750 ARRDC1Q8N5I2 433 aa9.41□□□□□ -0.9
USP28-212ENST00000544750 MCFD2Q8NI22 146 aa9.41□□□□□ -0.9
USP28-212ENST00000544750 VSTM2AQ8TAG5 236 aa9.41□□□□□ -0.9
USP28-212ENST00000544750 ZNF502Q8TBZ5 544 aa9.41□□□□□ -0.9
USP28-212ENST00000544750 TMEM190Q8WZ59 177 aa9.41□□□□□ -0.9
USP28-212ENST00000544750 MRGPRFQ96AM1 343 aa9.41□□□□□ -0.9
USP28-212ENST00000544750 PLEKHA2Q9HB19 425 aa9.41□□□□□ -0.9
USP28-212ENST00000544750 RSL24D1Q9UHA3 163 aaKnown RBP9.41□□□□□ -0.9
USP28-212ENST00000544750 UFC1Q9Y3C8 167 aa9.41□□□□□ -0.9
USP28-212ENST00000544750 IGHV3-35A0A0C4DH35 117 aa9.4□□□□□ -0.9
USP28-212ENST00000544750 DPPA5A6NC42 116 aa9.4□□□□□ -0.9
USP28-212ENST00000544750 ZNF701M0R085 212 aaPredicted RBP9.4□□□□□ -0.9
USP28-212ENST00000544750 DHFRP00374 187 aa9.4□□□□□ -0.9
USP28-212ENST00000544750 NQO2P16083 231 aa9.4□□□□□ -0.9
USP28-212ENST00000544750 F2RP25116 425 aa9.4□□□□□ -0.9
USP28-212ENST00000544750 GPR183P32249 361 aa9.4□□□□□ -0.9
USP28-212ENST00000544750 TAS2R19P59542 299 aa9.4□□□□□ -0.9
USP28-212ENST00000544750 SSBP1Q04837 148 aaKnown RBP9.4□□□□□ -0.9
USP28-212ENST00000544750 RBMS2Q15434 407 aaKnown RBP9.4□□□□□ -0.9
USP28-212ENST00000544750 FAAP20Q6NZ36 180 aa9.4□□□□□ -0.9
USP28-212ENST00000544750 STEAP1BQ6NZ63 245 aa9.4□□□□□ -0.9
USP28-212ENST00000544750 CMTM1Q8IZ96 169 aa9.4□□□□□ -0.9
USP28-212ENST00000544750 C11orf45Q8TAV5 145 aa9.4□□□□□ -0.9
USP28-212ENST00000544750 CD300LFQ8TDQ1 290 aa9.4□□□□□ -0.9
USP28-212ENST00000544750 C2CD4CQ8TF44 421 aa9.4□□□□□ -0.9
USP28-212ENST00000544750 DGCR14Q96DF8 476 aaKnown RBP9.4□□□□□ -0.9
USP28-212ENST00000544750 CXorf58Q96LI9 332 aa9.4□□□□□ -0.9
USP28-212ENST00000544750 RARRES2Q99969 163 aa9.4□□□□□ -0.9
USP28-212ENST00000544750 MFFQ9GZY8 342 aa9.4□□□□□ -0.9
USP28-212ENST00000544750 COMMD9Q9P000 198 aa9.4□□□□□ -0.9
USP28-212ENST00000544750 HSPG2P98160 4391 aa9.4□□□□□ -0.9
USP28-212ENST00000544750 CCDC160A6NGH7 325 aa9.39□□□□□ -0.91
USP28-212ENST00000544750 MARCH11A6NNE9 402 aa9.39□□□□□ -0.91
USP28-212ENST00000544750 UPK2O00526 184 aa9.39□□□□□ -0.91
USP28-212ENST00000544750 GSTZ1O43708 216 aaPredicted RBP9.39□□□□□ -0.91
USP28-212ENST00000544750 RAB3DO95716 219 aa9.39□□□□□ -0.91
USP28-212ENST00000544750 IGKV1-39P01597 117 aa9.39□□□□□ -0.91
USP28-212ENST00000544750 IGKV1D-39P04432 117 aa9.39□□□□□ -0.91
USP28-212ENST00000544750 IFNA4P05014 189 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms