RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 C1QTNF12Q5T7M4 302 aa8.81□□□□□ -1
PCDH9-204ENST00000544246 OSR1Q8TAX0 266 aaPredicted RBP8.81□□□□□ -1
PCDH9-204ENST00000544246 TMEM54Q969K7 222 aa8.81□□□□□ -1
PCDH9-204ENST00000544246 LOXL4Q96JB6 756 aa8.81□□□□□ -1
PCDH9-204ENST00000544246 ASCL2Q99929 193 aa8.81□□□□□ -1
PCDH9-204ENST00000544246 TFF3Q07654 80 aa8.8□□□□□ -1
PCDH9-204ENST00000544246 ORMDL2Q53FV1 153 aa8.8□□□□□ -1
PCDH9-204ENST00000544246 FBXL15Q9H469 300 aa8.8□□□□□ -1
PCDH9-204ENST00000544246 TNFRSF6BO95407 300 aa8.8□□□□□ -1
PCDH9-204ENST00000544246 MYOD1P15172 320 aa8.8□□□□□ -1
PCDH9-204ENST00000544246 VDAC2P45880 294 aaPredicted RBP8.8□□□□□ -1
PCDH9-204ENST00000544246 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.8□□□□□ -1
PCDH9-204ENST00000544246 SEPSECSQ9HD40 501 aaKnown RBP8.8□□□□□ -1
PCDH9-204ENST00000544246 TRBV5-7A0A0A0MS05 114 aa8.8□□□□□ -1
PCDH9-204ENST00000544246 PCOLCEQ15113 449 aa8.8□□□□□ -1
PCDH9-204ENST00000544246 FOXS1O43638 330 aa8.79□□□□□ -1
PCDH9-204ENST00000544246 LILRA6Q6PI73 481 aa8.79□□□□□ -1
PCDH9-204ENST00000544246 ZNF479Q96JC4 524 aa8.79□□□□□ -1
PCDH9-204ENST00000544246 GSN-AS1Q9NRJ2 163 aa8.79□□□□□ -1
PCDH9-204ENST00000544246 PATE3B3GLJ2 98 aa8.79□□□□□ -1
PCDH9-204ENST00000544246 ASCL4Q6XD76 172 aa8.79□□□□□ -1
PCDH9-204ENST00000544246 RCC1LQ96I51 464 aaKnown RBP8.79□□□□□ -1
PCDH9-204ENST00000544246 CHCHD5Q9BSY4 110 aa8.79□□□□□ -1
PCDH9-204ENST00000544246 ZNF703Q9H7S9 590 aaPredicted RBP8.79□□□□□ -1
PCDH9-204ENST00000544246 DOCK3Q8IZD9 2030 aa8.79□□□□□ -1
PCDH9-204ENST00000544246 TRIP12Q14669 1992 aaPredicted RBP8.79□□□□□ -1
PCDH9-204ENST00000544246 EPOPA6NHQ4 379 aa8.79□□□□□ -1
PCDH9-204ENST00000544246 HIGD1CA8MV81 97 aa8.79□□□□□ -1
PCDH9-204ENST00000544246 PEBP1P30086 187 aaKnown RBP8.79□□□□□ -1
PCDH9-204ENST00000544246 APOBEC3AP31941 199 aaPredicted RBP8.79□□□□□ -1
PCDH9-204ENST00000544246 NHLRC3Q5JS37 347 aa8.79□□□□□ -1
PCDH9-204ENST00000544246 SAMD5Q5TGI4 173 aa8.79□□□□□ -1
PCDH9-204ENST00000544246 OR5P3Q8WZ94 311 aa8.79□□□□□ -1
PCDH9-204ENST00000544246 OVOL2Q9BRP0 275 aa8.79□□□□□ -1
PCDH9-204ENST00000544246 COX11Q9Y6N1 276 aa8.79□□□□□ -1
PCDH9-204ENST00000544246 FABP5P3A8MUU1 101 aa8.79□□□□□ -1
PCDH9-204ENST00000544246 CELA2AP08217 269 aa8.79□□□□□ -1
PCDH9-204ENST00000544246 SPRED2Q7Z698 418 aa8.79□□□□□ -1
PCDH9-204ENST00000544246 TMEM52Q8NDY8 209 aa8.79□□□□□ -1
PCDH9-204ENST00000544246 SLC50A1Q9BRV3 221 aa8.79□□□□□ -1
PCDH9-204ENST00000544246 NRN1Q9NPD7 142 aa8.79□□□□□ -1
PCDH9-204ENST00000544246 DPM3Q9P2X0 92 aa8.79□□□□□ -1
PCDH9-204ENST00000544246 ATAD5Q96QE3 1844 aa8.79□□□□□ -1
PCDH9-204ENST00000544246 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.79□□□□□ -1
PCDH9-204ENST00000544246 TM4SF5O14894 197 aa8.79□□□□□ -1
PCDH9-204ENST00000544246 EFNB1P98172 346 aa8.79□□□□□ -1
PCDH9-204ENST00000544246 LURAP1LQ8IV03 231 aa8.79□□□□□ -1
PCDH9-204ENST00000544246 NPDC1Q9NQX5 325 aaPredicted RBP8.79□□□□□ -1
PCDH9-204ENST00000544246 KBTBD11-OT1A0A1B0GTJ5 212 aa8.78□□□□□ -1
PCDH9-204ENST00000544246 LINC00587B1AMM8 73 aa8.78□□□□□ -1
PCDH9-204ENST00000544246 GTSCR1Q86UQ5 136 aa8.78□□□□□ -1
PCDH9-204ENST00000544246 IGHV3-64A0A075B6Q5 118 aa8.78□□□□□ -1
PCDH9-204ENST00000544246 TMEM238C9JI98 176 aa8.78□□□□□ -1
PCDH9-204ENST00000544246 ATP5G3P48201 142 aa8.78□□□□□ -1
PCDH9-204ENST00000544246 MIR17HGQ75NE6 70 aa8.78□□□□□ -1
PCDH9-204ENST00000544246 GLMPQ8WWB7 406 aa8.78□□□□□ -1
PCDH9-204ENST00000544246 A0A087WWC5 75 aa8.78□□□□□ -1
PCDH9-204ENST00000544246 IGLV1-36A0A0B4J1U3 117 aa8.78□□□□□ -1
PCDH9-204ENST00000544246 C1QAP02745 245 aa8.78□□□□□ -1
PCDH9-204ENST00000544246 PRTN3P24158 256 aa8.78□□□□□ -1
PCDH9-204ENST00000544246 OR13A1Q8NGR1 328 aa8.78□□□□□ -1
PCDH9-204ENST00000544246 LHFPL6Q9Y693 200 aa8.78□□□□□ -1
PCDH9-204ENST00000544246 MYO5AQ9Y4I1 1855 aaKnown RBP8.78□□□□□ -1
PCDH9-204ENST00000544246 CENPVL1A0A0U1RR11 272 aa8.78□□□□□ -1
PCDH9-204ENST00000544246 ADMP35318 185 aa8.78□□□□□ -1
PCDH9-204ENST00000544246 STPG1Q5TH74 334 aa8.78□□□□□ -1
PCDH9-204ENST00000544246 ZNF501Q96CX3 271 aaPredicted RBP8.78□□□□□ -1
PCDH9-204ENST00000544246 A0A0U1RRA0 63 aa8.78□□□□□ -1
PCDH9-204ENST00000544246 ERVH48-1M5A8F1 160 aa8.78□□□□□ -1
PCDH9-204ENST00000544246 ERVK11-1P61568 191 aa8.78□□□□□ -1
PCDH9-204ENST00000544246 LIMS2Q7Z4I7 341 aa8.78□□□□□ -1
PCDH9-204ENST00000544246 PRADC1Q9BSG0 188 aa8.78□□□□□ -1
PCDH9-204ENST00000544246 TRAV9-2A0A087WT02 112 aa8.77□□□□□ -1
PCDH9-204ENST00000544246 H2BFSP57053 126 aa8.77□□□□□ -1
PCDH9-204ENST00000544246 NPC2P61916 151 aa8.77□□□□□ -1
PCDH9-204ENST00000544246 HSD52Q0P140 79 aa8.77□□□□□ -1
PCDH9-204ENST00000544246 AMELYQ99218 206 aa8.77□□□□□ -1
PCDH9-204ENST00000544246 FOXD3Q9UJU5 478 aaPredicted RBP8.77□□□□□ -1
PCDH9-204ENST00000544246 EPDR1Q9UM22 224 aa8.77□□□□□ -1
PCDH9-204ENST00000544246 SERF1AO75920 110 aa8.77□□□□□ -1.01
PCDH9-204ENST00000544246 C8orf82Q6P1X6 216 aaPredicted RBP8.77□□□□□ -1.01
PCDH9-204ENST00000544246 EFEMP2O95967 443 aa8.77□□□□□ -1.01
PCDH9-204ENST00000544246 HOXD3P31249 432 aaPredicted RBP8.77□□□□□ -1.01
PCDH9-204ENST00000544246 RBMY1FQ15415 496 aaKnown RBP8.77□□□□□ -1.01
PCDH9-204ENST00000544246 NEU4Q8WWR8 484 aaPredicted RBP8.77□□□□□ -1.01
PCDH9-204ENST00000544246 SLC25A38Q96DW6 304 aa8.77□□□□□ -1.01
PCDH9-204ENST00000544246 LTBP1Q14766 1721 aa8.77□□□□□ -1.01
PCDH9-204ENST00000544246 ITGB1BP1O14713 200 aa8.77□□□□□ -1.01
PCDH9-204ENST00000544246 LIMS1P48059 325 aa8.77□□□□□ -1.01
PCDH9-204ENST00000544246 ASPHD2Q6ICH7 369 aa8.77□□□□□ -1.01
PCDH9-204ENST00000544246 CARHSP1Q9Y2V2 147 aaKnown RBP8.77□□□□□ -1.01
PCDH9-204ENST00000544246 HS3ST3B1Q9Y662 390 aa8.77□□□□□ -1.01
PCDH9-204ENST00000544246 TRBV5-3A0A0A0MS03 114 aa8.77□□□□□ -1.01
PCDH9-204ENST00000544246 PAX4O43316 350 aa8.77□□□□□ -1.01
PCDH9-204ENST00000544246 SRP19P09132 144 aaKnown RBP8.77□□□□□ -1.01
PCDH9-204ENST00000544246 ZNF708P17019 499 aa8.77□□□□□ -1.01
PCDH9-204ENST00000544246 TGIF1Q15583 401 aa8.77□□□□□ -1.01
PCDH9-204ENST00000544246 OCIAD2Q56VL3 154 aa8.77□□□□□ -1.01
PCDH9-204ENST00000544246 LINC01560Q8TB33 94 aa8.77□□□□□ -1.01
PCDH9-204ENST00000544246 SRXN1Q9BYN0 137 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms