RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 COX5BP10606 129 aa13□□□□□ -0.33
CHD4-210ENST00000544040 SIGMAR1Q99720 223 aa13□□□□□ -0.33
CHD4-210ENST00000544040 ST20Q9HBF5 79 aa13□□□□□ -0.33
CHD4-210ENST00000544040 RFPL3SP0C7P2 107 aa13□□□□□ -0.33
CHD4-210ENST00000544040 FAM89BQ8N5H3 189 aa13□□□□□ -0.33
CHD4-210ENST00000544040 PHLDA1Q8WV24 401 aaPredicted RBP13□□□□□ -0.33
CHD4-210ENST00000544040 AHDC1Q5TGY3 1603 aaPredicted RBP13□□□□□ -0.33
CHD4-210ENST00000544040 RNF222A6NCQ9 220 aa12.99□□□□□ -0.33
CHD4-210ENST00000544040 LHX2P50458 406 aa12.99□□□□□ -0.33
CHD4-210ENST00000544040 FAM27E3Q08E93 113 aa12.99□□□□□ -0.33
CHD4-210ENST00000544040 PAPPA2Q9BXP8 1791 aa12.99□□□□□ -0.33
CHD4-210ENST00000544040 A0A087WWC5 75 aa12.99□□□□□ -0.33
CHD4-210ENST00000544040 PRR19A6NJB7 356 aa12.99□□□□□ -0.33
CHD4-210ENST00000544040 TFF1P04155 84 aa12.99□□□□□ -0.33
CHD4-210ENST00000544040 CD55P08174 381 aa12.99□□□□□ -0.33
CHD4-210ENST00000544040 UCNP55089 124 aa12.99□□□□□ -0.33
CHD4-210ENST00000544040 TMEM155Q4W5P6 130 aa12.99□□□□□ -0.33
CHD4-210ENST00000544040 CIARTQ8N365 385 aaPredicted RBP12.99□□□□□ -0.33
CHD4-210ENST00000544040 ZNF525Q8N782 197 aa12.99□□□□□ -0.33
CHD4-210ENST00000544040 DPH3P1Q9H4G8 78 aa12.99□□□□□ -0.33
CHD4-210ENST00000544040 CHTOPQ9Y3Y2 248 aaKnown RBP12.99□□□□□ -0.33
CHD4-210ENST00000544040 C5orf67F2Z3F1 127 aa12.99□□□□□ -0.33
CHD4-210ENST00000544040 FOXH1O75593 365 aa12.98□□□□□ -0.33
CHD4-210ENST00000544040 IFI27P40305 119 aaPredicted RBP12.98□□□□□ -0.33
CHD4-210ENST00000544040 RIPPLY2Q5TAB7 128 aa12.98□□□□□ -0.33
CHD4-210ENST00000544040 KIR3DL3Q8N743 410 aa12.98□□□□□ -0.33
CHD4-210ENST00000544040 TMEM170AQ8WVE7 144 aa12.98□□□□□ -0.33
CHD4-210ENST00000544040 NXT2Q9NPJ8 142 aaKnown RBP12.98□□□□□ -0.33
CHD4-210ENST00000544040 DEPPQ9NTK1 212 aa12.98□□□□□ -0.33
CHD4-210ENST00000544040 TIAF1O95411 115 aa12.98□□□□□ -0.33
CHD4-210ENST00000544040 DICER1Q9UPY3 1922 aaKnown RBP12.98□□□□□ -0.33
CHD4-210ENST00000544040 CCDC88CQ9P219 2028 aa12.98□□□□□ -0.33
CHD4-210ENST00000544040 HBDP02042 147 aa12.98□□□□□ -0.33
CHD4-210ENST00000544040 OSR1Q8TAX0 266 aaPredicted RBP12.98□□□□□ -0.33
CHD4-210ENST00000544040 B9A039 149 aa12.98□□□□□ -0.33
CHD4-210ENST00000544040 DPM2O94777 84 aa12.98□□□□□ -0.33
CHD4-210ENST00000544040 PYYP10082 97 aa12.98□□□□□ -0.33
CHD4-210ENST00000544040 SRSF6Q13247 344 aaKnown RBP12.98□□□□□ -0.33
CHD4-210ENST00000544040 RNF182Q8N6D2 247 aa12.98□□□□□ -0.33
CHD4-210ENST00000544040 RTN4RL2Q86UN3 420 aa12.98□□□□□ -0.33
CHD4-210ENST00000544040 HOXB1P14653 301 aaPredicted RBP12.97□□□□□ -0.33
CHD4-210ENST00000544040 CD24P25063 80 aa12.97□□□□□ -0.33
CHD4-210ENST00000544040 PILRBQ9UKJ0 227 aa12.97□□□□□ -0.33
CHD4-210ENST00000544040 DPM3Q9P2X0 92 aa12.97□□□□□ -0.33
CHD4-210ENST00000544040 ZNF638Q14966 1978 aaKnown RBP12.97□□□□□ -0.33
CHD4-210ENST00000544040 SRD5A1P18405 259 aa12.97□□□□□ -0.33
CHD4-210ENST00000544040 APOBEC3AP31941 199 aaPredicted RBP12.97□□□□□ -0.33
CHD4-210ENST00000544040 FOXL1Q12952 345 aa12.97□□□□□ -0.33
CHD4-210ENST00000544040 TMEM30BQ3MIR4 351 aa12.97□□□□□ -0.33
CHD4-210ENST00000544040 TIMM23BQ5SRD1 257 aa12.97□□□□□ -0.33
CHD4-210ENST00000544040 BCORQ6W2J9 1755 aa12.97□□□□□ -0.33
CHD4-210ENST00000544040 CD28P10747 220 aa12.96□□□□□ -0.33
CHD4-210ENST00000544040 ORAOV1Q8WV07 137 aa12.96□□□□□ -0.33
CHD4-210ENST00000544040 SIGLEC12Q96PQ1 595 aa12.96□□□□□ -0.33
CHD4-210ENST00000544040 TM2D1Q9BX74 207 aa12.96□□□□□ -0.33
CHD4-210ENST00000544040 PAX1P15863 534 aa12.96□□□□□ -0.33
CHD4-210ENST00000544040 PRTN3P24158 256 aa12.96□□□□□ -0.33
CHD4-210ENST00000544040 OTORQ9NRC9 128 aa12.96□□□□□ -0.33
CHD4-210ENST00000544040 ZNF831Q5JPB2 1677 aa12.96□□□□□ -0.33
CHD4-210ENST00000544040 A0A1B0GW15 77 aa12.96□□□□□ -0.33
CHD4-210ENST00000544040 CECR9P0C854 216 aa12.96□□□□□ -0.33
CHD4-210ENST00000544040 SRSF1Q07955 248 aaKnown RBP eCLIP12.96□□□□□ -0.331e-7■□□□□ 10.9
CHD4-210ENST00000544040 C1orf122Q6ZSJ8 110 aa12.96□□□□□ -0.33
CHD4-210ENST00000544040 NDUFAF3Q9BU61 184 aa12.96□□□□□ -0.33
CHD4-210ENST00000544040 IGKCP01834 107 aa12.96□□□□□ -0.33
CHD4-210ENST00000544040 HIST1H4AP62805 103 aaKnown RBP12.96□□□□□ -0.33
CHD4-210ENST00000544040 TRAV9-2A0A087WT02 112 aa12.96□□□□□ -0.34
CHD4-210ENST00000544040 EFEMP2O95967 443 aa12.96□□□□□ -0.34
CHD4-210ENST00000544040 OR4X2Q8NGF9 303 aa12.96□□□□□ -0.34
CHD4-210ENST00000544040 SLC25A2Q9BXI2 301 aa12.96□□□□□ -0.34
CHD4-210ENST00000544040 KBTBD11-OT1A0A1B0GTJ5 212 aa12.96□□□□□ -0.34
CHD4-210ENST00000544040 TDGF1P3P51864 188 aa12.96□□□□□ -0.34
CHD4-210ENST00000544040 CD300EQ496F6 205 aaPredicted RBP12.96□□□□□ -0.34
CHD4-210ENST00000544040 CELA3BP08861 270 aa12.95□□□□□ -0.34
CHD4-210ENST00000544040 SAMD5Q5TGI4 173 aa12.95□□□□□ -0.34
CHD4-210ENST00000544040 DMRTC2Q8IXT2 367 aaPredicted RBP12.95□□□□□ -0.34
CHD4-210ENST00000544040 UCP1P25874 307 aa12.95□□□□□ -0.34
CHD4-210ENST00000544040 ATP5IP56385 69 aaPredicted RBP12.95□□□□□ -0.34
CHD4-210ENST00000544040 Q6AWC8 147 aa12.95□□□□□ -0.34
CHD4-210ENST00000544040 CFHR5Q9BXR6 569 aa12.95□□□□□ -0.34
CHD4-210ENST00000544040 LSM4Q9Y4Z0 139 aaKnown RBP12.95□□□□□ -0.34
CHD4-210ENST00000544040 FOCADQ5VW36 1801 aa12.95□□□□□ -0.34
CHD4-210ENST00000544040 RAMP3O60896 148 aa12.95□□□□□ -0.34
CHD4-210ENST00000544040 Q6ZT83 130 aa12.95□□□□□ -0.34
CHD4-210ENST00000544040 SAP25Q8TEE9 199 aa12.95□□□□□ -0.34
CHD4-210ENST00000544040 C18orf12Q96KH6 178 aa12.95□□□□□ -0.34
CHD4-210ENST00000544040 BSPH1Q075Z2 132 aa12.95□□□□□ -0.34
CHD4-210ENST00000544040 STHQ8IWL8 128 aa12.95□□□□□ -0.34
CHD4-210ENST00000544040 LRP5O75197 1615 aa12.95□□□□□ -0.34
CHD4-210ENST00000544040 SMIM10L1P0DMW3 83 aa12.95□□□□□ -0.34
CHD4-210ENST00000544040 SMIM10Q96HG1 83 aa12.95□□□□□ -0.34
CHD4-210ENST00000544040 NDUFS8O00217 210 aa12.94□□□□□ -0.34
CHD4-210ENST00000544040 SEPSECSQ9HD40 501 aaKnown RBP12.94□□□□□ -0.34
CHD4-210ENST00000544040 SAA2-SAA4A0A096LPE2 208 aa12.94□□□□□ -0.34
CHD4-210ENST00000544040 A8MWV9 139 aa12.94□□□□□ -0.34
CHD4-210ENST00000544040 SAA2P0DJI9 122 aaPredicted RBP12.94□□□□□ -0.34
CHD4-210ENST00000544040 GZMBP10144 247 aa12.94□□□□□ -0.34
CHD4-210ENST00000544040 LURAP1LQ8IV03 231 aa12.94□□□□□ -0.34
CHD4-210ENST00000544040 FDCSPQ8NFU4 85 aa12.94□□□□□ -0.34
CHD4-210ENST00000544040 ZNF703Q9H7S9 590 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms