RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 SSBP2P81877 361 aaPredicted RBP15.85■□□□□ 0.13
COPS7A-218ENST00000543939 EBI3Q14213 229 aa15.85■□□□□ 0.13
COPS7A-218ENST00000543939 Q8N6K4 173 aa15.85■□□□□ 0.13
COPS7A-218ENST00000543939 C1orf159Q96HA4 380 aa15.85■□□□□ 0.13
COPS7A-218ENST00000543939 LSM4Q9Y4Z0 139 aaKnown RBP15.85■□□□□ 0.13
COPS7A-218ENST00000543939 FBN2P35556 2912 aa15.85■□□□□ 0.13
COPS7A-218ENST00000543939 FCN1O00602 326 aa15.84■□□□□ 0.13
COPS7A-218ENST00000543939 NPFFO15130 113 aa15.84■□□□□ 0.13
COPS7A-218ENST00000543939 AKR1C1Q04828 323 aa15.84■□□□□ 0.13
COPS7A-218ENST00000543939 LFNGQ8NES3 379 aa15.84■□□□□ 0.13
COPS7A-218ENST00000543939 SCRT1Q9BWW7 348 aa15.84■□□□□ 0.13
COPS7A-218ENST00000543939 USP9YO00507 2555 aaPredicted RBP15.84■□□□□ 0.13
COPS7A-218ENST00000543939 NAV3Q8IVL0 2385 aa15.84■□□□□ 0.13
COPS7A-218ENST00000543939 MSMBP08118 114 aa15.83■□□□□ 0.13
COPS7A-218ENST00000543939 HES1Q14469 280 aa15.83■□□□□ 0.13
COPS7A-218ENST00000543939 ZNF726P1Q15940 193 aa15.83■□□□□ 0.13
COPS7A-218ENST00000543939 MRPL41Q8IXM3 137 aaKnown RBP15.83■□□□□ 0.13
COPS7A-218ENST00000543939 P2RX4Q99571 388 aa15.83■□□□□ 0.13
COPS7A-218ENST00000543939 MGST2Q99735 147 aa15.83■□□□□ 0.13
COPS7A-218ENST00000543939 FAM96BQ9Y3D0 163 aa15.83■□□□□ 0.13
COPS7A-218ENST00000543939 TRAV1-1A0A0B4J248 108 aa15.82■□□□□ 0.12
COPS7A-218ENST00000543939 BTBD17A6NE02 478 aa15.82■□□□□ 0.12
COPS7A-218ENST00000543939 CD5P06127 495 aa15.82■□□□□ 0.12
COPS7A-218ENST00000543939 RAB2AP61019 212 aa15.82■□□□□ 0.12
COPS7A-218ENST00000543939 GNB1P62873 340 aa15.82■□□□□ 0.12
COPS7A-218ENST00000543939 PLGLAQ15195 96 aa15.82■□□□□ 0.12
COPS7A-218ENST00000543939 FFAR4Q5NUL3 377 aa15.82■□□□□ 0.12
COPS7A-218ENST00000543939 PIP4P2Q8N4L2 257 aa15.82■□□□□ 0.12
COPS7A-218ENST00000543939 SFT2D1Q8WV19 159 aa15.82■□□□□ 0.12
COPS7A-218ENST00000543939 MBD3L1Q8WWY6 194 aa15.82■□□□□ 0.12
COPS7A-218ENST00000543939 RCC1LQ96I51 464 aaKnown RBP15.82■□□□□ 0.12
COPS7A-218ENST00000543939 TMEM231Q9H6L2 316 aa15.82■□□□□ 0.12
COPS7A-218ENST00000543939 BEX4Q9NWD9 120 aaPredicted RBP15.82■□□□□ 0.12
COPS7A-218ENST00000543939 KIAA1456Q9P272 454 aa15.82■□□□□ 0.12
COPS7A-218ENST00000543939 A0A096LNT2 108 aa15.82■□□□□ 0.12
COPS7A-218ENST00000543939 A0A1B0GV50 99 aa15.82■□□□□ 0.12
COPS7A-218ENST00000543939 TMEM218A2RU14 115 aa15.82■□□□□ 0.12
COPS7A-218ENST00000543939 TEX22C9J3V5 150 aa15.82■□□□□ 0.12
COPS7A-218ENST00000543939 MBP02144 154 aa15.82■□□□□ 0.12
COPS7A-218ENST00000543939 SUB1P53999 127 aaKnown RBP eCLIP15.82■□□□□ 0.122e-7■■■■■ 43.7
COPS7A-218ENST00000543939 CCL20P78556 96 aa15.82■□□□□ 0.12
COPS7A-218ENST00000543939 CD69Q07108 199 aa15.82■□□□□ 0.12
COPS7A-218ENST00000543939 ZNF114Q8NC26 417 aa15.82■□□□□ 0.12
COPS7A-218ENST00000543939 TREM1Q9NP99 234 aa15.82■□□□□ 0.12
COPS7A-218ENST00000543939 HBE1P02100 147 aa15.81■□□□□ 0.12
COPS7A-218ENST00000543939 OPRK1P41145 380 aa15.81■□□□□ 0.12
COPS7A-218ENST00000543939 PVRIGQ6DKI7 326 aa15.81■□□□□ 0.12
COPS7A-218ENST00000543939 TEPPQ6URK8 271 aa15.81■□□□□ 0.12
COPS7A-218ENST00000543939 RPP25LQ8N5L8 163 aaKnown RBP15.81■□□□□ 0.12
COPS7A-218ENST00000543939 RNASEH2CQ8TDP1 164 aaKnown RBP15.81■□□□□ 0.12
COPS7A-218ENST00000543939 SRSF12Q8WXF0 261 aaKnown RBP15.81■□□□□ 0.12
COPS7A-218ENST00000543939 CACNG8Q8WXS5 425 aa15.81■□□□□ 0.12
COPS7A-218ENST00000543939 NARS2Q96I59 477 aaKnown RBP15.81■□□□□ 0.12
COPS7A-218ENST00000543939 GGTLC1Q9BX51 225 aa15.81■□□□□ 0.12
COPS7A-218ENST00000543939 ANKRD17O75179 2603 aaKnown RBP15.81■□□□□ 0.12
COPS7A-218ENST00000543939 B4DSR2 109 aa15.8■□□□□ 0.12
COPS7A-218ENST00000543939 SOX15O60248 233 aa15.8■□□□□ 0.12
COPS7A-218ENST00000543939 REG1AP05451 166 aa15.8■□□□□ 0.12
COPS7A-218ENST00000543939 AREGP15514 252 aa15.8■□□□□ 0.12
COPS7A-218ENST00000543939 GPX4P36969 197 aaPredicted RBP15.8■□□□□ 0.12
COPS7A-218ENST00000543939 GUK1Q16774 197 aa15.8■□□□□ 0.12
COPS7A-218ENST00000543939 C5orf64Q2M2E5 130 aa15.8■□□□□ 0.12
COPS7A-218ENST00000543939 SSX7Q7RTT5 188 aa15.8■□□□□ 0.12
COPS7A-218ENST00000543939 TMEM144Q7Z5S9 345 aa15.8■□□□□ 0.12
COPS7A-218ENST00000543939 IGHV1-69DA0A0B4J2H0 117 aa15.8■□□□□ 0.12
COPS7A-218ENST00000543939 IGHV1-69P01742 117 aa15.8■□□□□ 0.12
COPS7A-218ENST00000543939 GAMTQ14353 236 aa15.8■□□□□ 0.12
COPS7A-218ENST00000543939 MLANAQ16655 118 aa15.8■□□□□ 0.12
COPS7A-218ENST00000543939 DEFB113Q30KQ7 82 aa15.8■□□□□ 0.12
COPS7A-218ENST00000543939 SRSF8Q9BRL6 282 aaKnown RBP15.8■□□□□ 0.12
COPS7A-218ENST00000543939 TMEM11P17152 192 aa15.79■□□□□ 0.12
COPS7A-218ENST00000543939 M6PRP20645 277 aa15.79■□□□□ 0.12
COPS7A-218ENST00000543939 BRS3P32247 399 aa15.79■□□□□ 0.12
COPS7A-218ENST00000543939 SLC16A13Q7RTY0 426 aa15.79■□□□□ 0.12
COPS7A-218ENST00000543939 LRRC75A-AS1Q8N1F1 130 aa15.79■□□□□ 0.12
COPS7A-218ENST00000543939 OR10G4Q8NGN3 311 aa15.79■□□□□ 0.12
COPS7A-218ENST00000543939 OR10G9Q8NGN4 311 aa15.79■□□□□ 0.12
COPS7A-218ENST00000543939 OR10G7Q8NGN6 311 aa15.79■□□□□ 0.12
COPS7A-218ENST00000543939 PSMG3-AS1Q96PY0 264 aa15.79■□□□□ 0.12
COPS7A-218ENST00000543939 C9JQL5 133 aa15.78■□□□□ 0.12
COPS7A-218ENST00000543939 FAM106CPP0CH98 169 aa15.78■□□□□ 0.12
COPS7A-218ENST00000543939 ACOT6Q3I5F7 207 aaPredicted RBP15.78■□□□□ 0.12
COPS7A-218ENST00000543939 FAM120AOSQ5T036 256 aa15.78■□□□□ 0.12
COPS7A-218ENST00000543939 RUSC1-AS1Q66K80 236 aa15.78■□□□□ 0.12
COPS7A-218ENST00000543939 CCDC28AQ8IWP9 274 aa15.78■□□□□ 0.12
COPS7A-218ENST00000543939 PBDC1Q9BVG4 233 aa15.78■□□□□ 0.12
COPS7A-218ENST00000543939 FNDC4Q9H6D8 234 aaPredicted RBP15.78■□□□□ 0.12
COPS7A-218ENST00000543939 KCNIP2Q9NS61 270 aa15.78■□□□□ 0.12
COPS7A-218ENST00000543939 PTPN13Q12923 2485 aa15.78■□□□□ 0.12
COPS7A-218ENST00000543939 DOPEY2Q9Y3R5 2298 aa15.77■□□□□ 0.12
COPS7A-218ENST00000543939 TRAV20A0A0B4J274 112 aa15.77■□□□□ 0.12
COPS7A-218ENST00000543939 YIF1AO95070 293 aa15.77■□□□□ 0.12
COPS7A-218ENST00000543939 MFAP2P55001 183 aa15.77■□□□□ 0.12
COPS7A-218ENST00000543939 RAB31Q13636 194 aa15.77■□□□□ 0.12
COPS7A-218ENST00000543939 PEA15Q15121 130 aa15.77■□□□□ 0.12
COPS7A-218ENST00000543939 MIC13Q5XKP0 118 aa15.77■□□□□ 0.12
COPS7A-218ENST00000543939 LCN15Q6UWW0 184 aa15.77■□□□□ 0.12
COPS7A-218ENST00000543939 SLC39A9Q9NUM3 307 aa15.77■□□□□ 0.12
COPS7A-218ENST00000543939 PXMP4Q9Y6I8 212 aa15.77■□□□□ 0.12
COPS7A-218ENST00000543939 TRAV40A0A0B4J280 105 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms