RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 SHPKQ9UHJ6 478 aa13.79□□□□□ -0.2
TSFM-208ENST00000543727 F11RQ9Y624 299 aaKnown RBP13.79□□□□□ -0.2
TSFM-208ENST00000543727 NOTCH3Q9UM47 2321 aa13.79□□□□□ -0.2
TSFM-208ENST00000543727 NOTCH1P46531 2555 aa13.78□□□□□ -0.2
TSFM-208ENST00000543727 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.78□□□□□ -0.2
TSFM-208ENST00000543727 TRBV7-1A0A0A6YYK4 115 aa13.78□□□□□ -0.2
TSFM-208ENST00000543727 A0A0B4J293 547 aa13.78□□□□□ -0.2
TSFM-208ENST00000543727 DBX1A6NMT0 343 aa13.78□□□□□ -0.2
TSFM-208ENST00000543727 OR2J3O76001 311 aa13.78□□□□□ -0.2
TSFM-208ENST00000543727 REG1AP05451 166 aa13.78□□□□□ -0.2
TSFM-208ENST00000543727 OXLD1Q5BKU9 147 aa13.78□□□□□ -0.2
TSFM-208ENST00000543727 C9orf66Q5T8R8 295 aa13.78□□□□□ -0.2
TSFM-208ENST00000543727 REC114Q7Z4M0 266 aa13.78□□□□□ -0.2
TSFM-208ENST00000543727 LRTM2Q8N967 370 aa13.78□□□□□ -0.2
TSFM-208ENST00000543727 OR1P1Q8NH06 330 aa13.78□□□□□ -0.2
TSFM-208ENST00000543727 EEF1AKMT3Q96AZ1 226 aa13.78□□□□□ -0.2
TSFM-208ENST00000543727 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.78□□□□□ -0.2
TSFM-208ENST00000543727 OVOL1O14753 267 aa13.77□□□□□ -0.21
TSFM-208ENST00000543727 LYRM1O43325 122 aa13.77□□□□□ -0.21
TSFM-208ENST00000543727 HOXD3P31249 432 aaPredicted RBP13.77□□□□□ -0.21
TSFM-208ENST00000543727 CCR6P51684 374 aa13.77□□□□□ -0.21
TSFM-208ENST00000543727 ERHP84090 104 aaKnown RBP13.77□□□□□ -0.21
TSFM-208ENST00000543727 ZNF846Q147U1 533 aa13.77□□□□□ -0.21
TSFM-208ENST00000543727 PDLIM3Q53GG5 364 aaPredicted RBP13.77□□□□□ -0.21
TSFM-208ENST00000543727 OR2C3Q8N628 320 aa13.77□□□□□ -0.21
TSFM-208ENST00000543727 SLC35G3Q8N808 338 aa13.77□□□□□ -0.21
TSFM-208ENST00000543727 VN1R17PQ8TDU5 208 aa13.77□□□□□ -0.21
TSFM-208ENST00000543727 ST8SIA3O43173 380 aa13.76□□□□□ -0.21
TSFM-208ENST00000543727 IFNA17P01571 189 aa13.76□□□□□ -0.21
TSFM-208ENST00000543727 VAMP1P23763 118 aa13.76□□□□□ -0.21
TSFM-208ENST00000543727 BTCP35070 178 aa13.76□□□□□ -0.21
TSFM-208ENST00000543727 SPCS3P61009 180 aa13.76□□□□□ -0.21
TSFM-208ENST00000543727 EGFEM1PQ0D2K5 195 aa13.76□□□□□ -0.21
TSFM-208ENST00000543727 TATDN3Q17R31 274 aa13.76□□□□□ -0.21
TSFM-208ENST00000543727 DCUN1D4Q92564 292 aa13.76□□□□□ -0.21
TSFM-208ENST00000543727 CMYA5Q8N3K9 4069 aa13.75□□□□□ -0.21
TSFM-208ENST00000543727 A0A0G2JRQ6 117 aa13.75□□□□□ -0.21
TSFM-208ENST00000543727 ANKRD34BA5PLL1 514 aa13.75□□□□□ -0.21
TSFM-208ENST00000543727 SEC14L6B5MCN3 397 aa13.75□□□□□ -0.21
TSFM-208ENST00000543727 SFT2D2O95562 160 aa13.75□□□□□ -0.21
TSFM-208ENST00000543727 SULT1A3P0DMM9 295 aa13.75□□□□□ -0.21
TSFM-208ENST00000543727 SULT1A4P0DMN0 295 aa13.75□□□□□ -0.21
TSFM-208ENST00000543727 SLURP1P55000 103 aa13.75□□□□□ -0.21
TSFM-208ENST00000543727 IZUMO4Q1ZYL8 232 aa13.75□□□□□ -0.21
TSFM-208ENST00000543727 RPEL1Q2QD12 228 aa13.75□□□□□ -0.21
TSFM-208ENST00000543727 NMSQ5H8A3 153 aa13.75□□□□□ -0.21
TSFM-208ENST00000543727 DLX4Q92988 240 aaPredicted RBP13.75□□□□□ -0.21
TSFM-208ENST00000543727 ENY2Q9NPA8 101 aa13.75□□□□□ -0.21
TSFM-208ENST00000543727 CACNG5Q9UF02 275 aa13.75□□□□□ -0.21
TSFM-208ENST00000543727 CORTO00230 105 aa13.74□□□□□ -0.21
TSFM-208ENST00000543727 PLA2G10O15496 165 aa13.74□□□□□ -0.21
TSFM-208ENST00000543727 NDUFB8O95169 186 aa13.74□□□□□ -0.21
TSFM-208ENST00000543727 SLC25A6P12236 298 aa13.74□□□□□ -0.21
TSFM-208ENST00000543727 SUB1P53999 127 aaKnown RBP eCLIP13.74□□□□□ -0.21
TSFM-208ENST00000543727 DEFA5Q01523 94 aa13.74□□□□□ -0.21
TSFM-208ENST00000543727 DEFA6Q01524 100 aa13.74□□□□□ -0.21
TSFM-208ENST00000543727 PPP1R1AQ13522 171 aa13.74□□□□□ -0.21
TSFM-208ENST00000543727 KLF5Q13887 457 aaPredicted RBP13.74□□□□□ -0.21
TSFM-208ENST00000543727 C19orf35Q6ZS72 473 aa13.74□□□□□ -0.21
TSFM-208ENST00000543727 C1QL4Q86Z23 238 aa13.74□□□□□ -0.21
TSFM-208ENST00000543727 GPR146Q96CH1 333 aa13.74□□□□□ -0.21
TSFM-208ENST00000543727 ELOVL1Q9BW60 279 aa13.74□□□□□ -0.21
TSFM-208ENST00000543727 DMRT1Q9Y5R6 373 aa13.74□□□□□ -0.21
TSFM-208ENST00000543727 MEGF8Q7Z7M0 2845 aa13.74□□□□□ -0.21
TSFM-208ENST00000543727 A0A1B0GU03 582 aa13.73□□□□□ -0.21
TSFM-208ENST00000543727 LINC00854A0A1B0GVQ3 168 aa13.73□□□□□ -0.21
TSFM-208ENST00000543727 GGCTO75223 188 aaKnown RBP13.73□□□□□ -0.21
TSFM-208ENST00000543727 SNCAP37840 140 aa13.73□□□□□ -0.21
TSFM-208ENST00000543727 HOXA1P49639 335 aaPredicted RBP13.73□□□□□ -0.21
TSFM-208ENST00000543727 SMCO1Q147U7 214 aa13.73□□□□□ -0.21
TSFM-208ENST00000543727 SLC25A24Q6NUK1 477 aa13.73□□□□□ -0.21
TSFM-208ENST00000543727 MZT2BQ6NZ67 158 aa13.73□□□□□ -0.21
TSFM-208ENST00000543727 ACSM6Q6P461 480 aa13.73□□□□□ -0.21
TSFM-208ENST00000543727 Q6ZRM9 215 aa13.73□□□□□ -0.21
TSFM-208ENST00000543727 ZNF502Q8TBZ5 544 aa13.73□□□□□ -0.21
TSFM-208ENST00000543727 CCDC140Q96MF4 163 aa13.73□□□□□ -0.21
TSFM-208ENST00000543727 GAR1Q9NY12 217 aaKnown RBP13.73□□□□□ -0.21
TSFM-208ENST00000543727 TMED3Q9Y3Q3 217 aa13.73□□□□□ -0.21
TSFM-208ENST00000543727 BMPR1BO00238 502 aa13.72□□□□□ -0.21
TSFM-208ENST00000543727 UPK1BO75841 260 aa13.72□□□□□ -0.21
TSFM-208ENST00000543727 HLA-AP01891 365 aaKnown RBP13.72□□□□□ -0.21
TSFM-208ENST00000543727 PEMTQ9UBM1 199 aa13.72□□□□□ -0.21
TSFM-208ENST00000543727 MFSD2BA6NFX1 497 aa13.71□□□□□ -0.21
TSFM-208ENST00000543727 TRBV12-3P01733 135 aa13.71□□□□□ -0.21
TSFM-208ENST00000543727 MFAP2P55001 183 aa13.71□□□□□ -0.21
TSFM-208ENST00000543727 ASAH1Q13510 395 aa13.71□□□□□ -0.21
TSFM-208ENST00000543727 SPSB3Q6PJ21 355 aa13.71□□□□□ -0.21
TSFM-208ENST00000543727 LYZL2Q7Z4W2 148 aa13.71□□□□□ -0.21
TSFM-208ENST00000543727 OR9G4Q8NGQ1 327 aa13.71□□□□□ -0.21
TSFM-208ENST00000543727 COQ8AQ8NI60 647 aa13.71□□□□□ -0.21
TSFM-208ENST00000543727 C20orf85Q9H1P6 137 aa13.71□□□□□ -0.21
TSFM-208ENST00000543727 C9orf170A2RU37 121 aa13.7□□□□□ -0.22
TSFM-208ENST00000543727 LGALS9O00182 355 aa13.7□□□□□ -0.22
TSFM-208ENST00000543727 OR4E1P0C645 316 aa13.7□□□□□ -0.22
TSFM-208ENST00000543727 FCGR2BP31994 310 aaPredicted RBP13.7□□□□□ -0.22
TSFM-208ENST00000543727 ARL3P36405 182 aa13.7□□□□□ -0.22
TSFM-208ENST00000543727 HTR2BP41595 481 aa13.7□□□□□ -0.22
TSFM-208ENST00000543727 DHRS2Q13268 280 aa13.7□□□□□ -0.22
TSFM-208ENST00000543727 BSXQ3C1V8 233 aa13.7□□□□□ -0.22
TSFM-208ENST00000543727 ANKRD55Q3KP44 614 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms