RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 A0A0B4J293 547 aa6.44□□□□□ -1.38
TRIM59-208ENST00000543469 MSGN1A6NI15 193 aa6.44□□□□□ -1.38
TRIM59-208ENST00000543469 OR7C2O60412 319 aa6.44□□□□□ -1.38
TRIM59-208ENST00000543469 RPL7P18124 248 aaKnown RBP6.44□□□□□ -1.38
TRIM59-208ENST00000543469 OR10J1P30954 320 aa6.44□□□□□ -1.38
TRIM59-208ENST00000543469 TPPP2P59282 170 aa6.44□□□□□ -1.38
TRIM59-208ENST00000543469 HRH4Q9H3N8 390 aa6.44□□□□□ -1.38
TRIM59-208ENST00000543469 PXMP4Q9Y6I8 212 aa6.44□□□□□ -1.38
TRIM59-208ENST00000543469 PSG9Q00887 426 aa6.44□□□□□ -1.38
TRIM59-208ENST00000543469 ZNF600Q6ZNG1 722 aa6.44□□□□□ -1.38
TRIM59-208ENST00000543469 ZNF114Q8NC26 417 aa6.44□□□□□ -1.38
TRIM59-208ENST00000543469 FAM210AQ96ND0 272 aa6.44□□□□□ -1.38
TRIM59-208ENST00000543469 WNT10AQ9GZT5 417 aa6.44□□□□□ -1.38
TRIM59-208ENST00000543469 CENPVL3A0A0U1RRI6 287 aa6.44□□□□□ -1.38
TRIM59-208ENST00000543469 ZNF785A8K8V0 405 aa6.44□□□□□ -1.38
TRIM59-208ENST00000543469 SNAPINO95295 136 aa6.44□□□□□ -1.38
TRIM59-208ENST00000543469 RPL29P47914 159 aaKnown RBP6.44□□□□□ -1.38
TRIM59-208ENST00000543469 RND2P52198 227 aa6.44□□□□□ -1.38
TRIM59-208ENST00000543469 LYZP61626 148 aa6.44□□□□□ -1.38
TRIM59-208ENST00000543469 CST9LP1Q5W188 147 aa6.44□□□□□ -1.38
TRIM59-208ENST00000543469 CLEC9AQ6UXN8 241 aa6.44□□□□□ -1.38
TRIM59-208ENST00000543469 PSMG3-AS1Q96PY0 264 aa6.44□□□□□ -1.38
TRIM59-208ENST00000543469 TRGV9Q99603 122 aa6.44□□□□□ -1.38
TRIM59-208ENST00000543469 IGHV3OR16-10A0A075B7F0 116 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 RNASEK-C17orf49H0YIS7 233 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 I3L521 148 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 ELANEP08246 267 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 IGHV4-31P0DP07 118 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 ATP6V0CP27449 155 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 CNN1P51911 297 aaKnown RBP6.43□□□□□ -1.38
TRIM59-208ENST00000543469 TEX38Q6PEX7 206 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 DAZAP1Q96EP5 407 aaKnown RBP6.43□□□□□ -1.38
TRIM59-208ENST00000543469 OR4C12Q96R67 309 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 CITED4Q96RK1 184 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 NDUFA4L2Q9NRX3 87 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 PSMB11A5LHX3 300 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 UBE2G1P62253 170 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 GUK1Q16774 197 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 SPINK9Q5DT21 86 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 OR51G1Q8NGK1 321 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 RXFP4Q8TDU9 374 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 DNAJC4Q9NNZ3 241 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 SHANK1Q9Y566 2161 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 PDE6DO43924 150 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 NDUFA3O95167 84 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 EBI3Q14213 229 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 BPIFA4PQ86YQ2 179 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 VKORC1L1Q8N0U8 176 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 ZNF295-AS1Q8N0V1 137 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 SGMS2Q8NHU3 365 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 PARP12Q9H0J9 701 aaKnown RBP6.43□□□□□ -1.38
TRIM59-208ENST00000543469 IGSF23A1L1A6 192 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 XKRY2A2RUG3 117 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 TCF21O43680 179 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 HIST1H1EP10412 219 aaKnown RBP6.43□□□□□ -1.38
TRIM59-208ENST00000543469 SPP1P10451 314 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 TUSC1Q2TAM9 212 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 AKIRIN2Q53H80 203 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 SVBPQ8N300 66 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 Q8N7P7 452 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 C15orf54Q8N8G6 183 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 LHFPL5Q8TAF8 219 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 ST6GALNAC6Q969X2 333 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 WDR83OSQ9Y284 106 aa6.43□□□□□ -1.38
TRIM59-208ENST00000543469 M0R036 132 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 ZNF134P52741 427 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 CEBPGP53567 150 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 CX3CL1P78423 397 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 SOHLH1Q5JUK2 328 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 IGFBPL1Q8WX77 278 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 BSCL2Q96G97 398 aaPredicted RBP6.42□□□□□ -1.38
TRIM59-208ENST00000543469 NIPSNAP3BQ9BS92 247 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 RNF126Q9BV68 326 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 MED9Q9NWA0 146 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 RNF114Q9Y508 228 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 NCOR2Q9Y618 2525 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 TRAV14DV4A0A0A6YYC5 116 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 SERTM2A0A1B0GWG4 89 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 A0A1W2PPI3 338 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 PPP1R2P9O14990 202 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 LINC00869P0C866 280 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 CT45A10P0DMU9 189 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 CXCL2P19875 107 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 ZFP36P26651 326 aaKnown RBP6.42□□□□□ -1.38
TRIM59-208ENST00000543469 COL8A1P27658 744 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 AKR1C3P42330 323 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 HCP5Q6MZN7 132 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 TTC9CQ8N5M4 171 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 OR1B1Q8NGR6 318 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 DYNLRB2Q8TF09 96 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 TCRBV4S1A1TA0A5B7 111 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 F8W036 122 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 MMP23AO75900 390 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 C8orf88P0DMB2 117 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 NPPCP23582 126 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 NHLH2Q02577 135 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 RPEL1Q2QD12 228 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 LIME1Q9H400 295 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 ZNRD1Q9P1U0 126 aa6.42□□□□□ -1.38
TRIM59-208ENST00000543469 KCNIP4Q6PIL6 250 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms