RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 ZNF785A8K8V0 405 aa13.39□□□□□ -0.27
VARS2-212ENST00000542001 RPL27AP46776 148 aaKnown RBP13.39□□□□□ -0.27
VARS2-212ENST00000542001 FOXA3P55318 350 aaPredicted RBP13.39□□□□□ -0.27
VARS2-212ENST00000542001 P2RX4Q99571 388 aa13.39□□□□□ -0.27
VARS2-212ENST00000542001 MRPL18Q9H0U6 180 aaKnown RBP13.39□□□□□ -0.27
VARS2-212ENST00000542001 IGKV1-39P01597 117 aa13.39□□□□□ -0.27
VARS2-212ENST00000542001 IGKV1D-39P04432 117 aa13.39□□□□□ -0.27
VARS2-212ENST00000542001 TIMM23BQ5SRD1 257 aa13.39□□□□□ -0.27
VARS2-212ENST00000542001 IBA57Q5T440 356 aaKnown RBP13.39□□□□□ -0.27
VARS2-212ENST00000542001 PRNTQ86SH4 94 aa13.39□□□□□ -0.27
VARS2-212ENST00000542001 C20orf202A1L168 122 aa13.39□□□□□ -0.27
VARS2-212ENST00000542001 GNG7O60262 68 aa13.39□□□□□ -0.27
VARS2-212ENST00000542001 HTR1DP28221 377 aa13.39□□□□□ -0.27
VARS2-212ENST00000542001 COLCA1Q6ZS62 124 aa13.39□□□□□ -0.27
VARS2-212ENST00000542001 SFRP2Q96HF1 295 aa13.39□□□□□ -0.27
VARS2-212ENST00000542001 RNASE7Q9H1E1 156 aaKnown RBP13.39□□□□□ -0.27
VARS2-212ENST00000542001 TRANK1O15050 2925 aa13.38□□□□□ -0.27
VARS2-212ENST00000542001 HIST1H1BP16401 226 aaKnown RBP13.38□□□□□ -0.27
VARS2-212ENST00000542001 CD82P27701 267 aa13.38□□□□□ -0.27
VARS2-212ENST00000542001 PAX9P55771 341 aa13.38□□□□□ -0.27
VARS2-212ENST00000542001 FAM90A1Q86YD7 464 aa13.38□□□□□ -0.27
VARS2-212ENST00000542001 COA4Q9NYJ1 87 aa13.38□□□□□ -0.27
VARS2-212ENST00000542001 WASHC3Q9Y3C0 194 aa13.38□□□□□ -0.27
VARS2-212ENST00000542001 CGB1A6NKQ9 187 aa13.38□□□□□ -0.27
VARS2-212ENST00000542001 DDTP30046 118 aa13.38□□□□□ -0.27
VARS2-212ENST00000542001 C11orf42Q8N5U0 333 aa13.38□□□□□ -0.27
VARS2-212ENST00000542001 GCSAMQ8N6F7 178 aa13.38□□□□□ -0.27
VARS2-212ENST00000542001 STARD4Q96DR4 205 aa13.38□□□□□ -0.27
VARS2-212ENST00000542001 PPP1R14DQ9NXH3 145 aa13.38□□□□□ -0.27
VARS2-212ENST00000542001 LY6HO94772 140 aa13.38□□□□□ -0.27
VARS2-212ENST00000542001 SOD3P08294 240 aa13.38□□□□□ -0.27
VARS2-212ENST00000542001 HNRNPA3P51991 378 aaKnown RBP13.38□□□□□ -0.27
VARS2-212ENST00000542001 ZNF146Q15072 292 aa13.38□□□□□ -0.27
VARS2-212ENST00000542001 MMD2Q8IY49 270 aa13.38□□□□□ -0.27
VARS2-212ENST00000542001 RASL11BQ9BPW5 248 aa13.38□□□□□ -0.27
VARS2-212ENST00000542001 M0R2Z0 102 aa13.37□□□□□ -0.27
VARS2-212ENST00000542001 SS18L1O75177 396 aaPredicted RBP13.37□□□□□ -0.27
VARS2-212ENST00000542001 HOXA5P20719 270 aa13.37□□□□□ -0.27
VARS2-212ENST00000542001 ASPHD1Q5U4P2 390 aa13.37□□□□□ -0.27
VARS2-212ENST00000542001 ABCA2Q9BZC7 2435 aa13.37□□□□□ -0.27
VARS2-212ENST00000542001 KBTBD11-OT1A0A1B0GTJ5 212 aa13.37□□□□□ -0.27
VARS2-212ENST00000542001 C5orf52A6NGY3 159 aa13.37□□□□□ -0.27
VARS2-212ENST00000542001 DKK1O94907 266 aa13.37□□□□□ -0.27
VARS2-212ENST00000542001 IGHV3-23P01764 117 aa13.37□□□□□ -0.27
VARS2-212ENST00000542001 ASCL4Q6XD76 172 aa13.37□□□□□ -0.27
VARS2-212ENST00000542001 CBY1Q9Y3M2 126 aa13.37□□□□□ -0.27
VARS2-212ENST00000542001 TMEM250H0YL14 139 aa13.37□□□□□ -0.27
VARS2-212ENST00000542001 LYL1P12980 280 aa13.37□□□□□ -0.27
VARS2-212ENST00000542001 SRIP30626 198 aa13.37□□□□□ -0.27
VARS2-212ENST00000542001 SCGB2A2Q13296 93 aa13.37□□□□□ -0.27
VARS2-212ENST00000542001 ECSCRQ19T08 205 aa13.37□□□□□ -0.27
VARS2-212ENST00000542001 FBXL15Q9H469 300 aa13.37□□□□□ -0.27
VARS2-212ENST00000542001 IGHV3OR16-10A0A075B7F0 116 aa13.36□□□□□ -0.27
VARS2-212ENST00000542001 TRAV5A0A0B4J249 113 aa13.36□□□□□ -0.27
VARS2-212ENST00000542001 CBY3A6NI87 242 aa13.36□□□□□ -0.27
VARS2-212ENST00000542001 IFNL4K9M1U5 179 aa13.36□□□□□ -0.27
VARS2-212ENST00000542001 PYYP10082 97 aa13.36□□□□□ -0.27
VARS2-212ENST00000542001 Q6ZN92 141 aa13.36□□□□□ -0.27
VARS2-212ENST00000542001 OR4F17Q8NGA8 305 aa13.36□□□□□ -0.27
VARS2-212ENST00000542001 SEPSECSQ9HD40 501 aaKnown RBP13.36□□□□□ -0.27
VARS2-212ENST00000542001 IGHV3-49A0A0A0MS15 119 aa13.36□□□□□ -0.27
VARS2-212ENST00000542001 A0A1B0GUS0 222 aa13.36□□□□□ -0.27
VARS2-212ENST00000542001 FCER1GP30273 86 aa13.36□□□□□ -0.27
VARS2-212ENST00000542001 FAM19A2Q8N3H0 131 aa13.36□□□□□ -0.27
VARS2-212ENST00000542001 UBTD1Q9HAC8 227 aa13.36□□□□□ -0.27
VARS2-212ENST00000542001 DNAJC4Q9NNZ3 241 aa13.36□□□□□ -0.27
VARS2-212ENST00000542001 AMMECR1Q9Y4X0 333 aaPredicted RBP13.36□□□□□ -0.27
VARS2-212ENST00000542001 MPDU1O75352 247 aa13.36□□□□□ -0.27
VARS2-212ENST00000542001 P01737 135 aa13.36□□□□□ -0.27
VARS2-212ENST00000542001 IL15RAQ13261 267 aa13.36□□□□□ -0.27
VARS2-212ENST00000542001 RNF2Q99496 336 aa13.36□□□□□ -0.27
VARS2-212ENST00000542001 HSPB7Q9UBY9 170 aa13.36□□□□□ -0.27
VARS2-212ENST00000542001 PKIAP61925 76 aa13.35□□□□□ -0.27
VARS2-212ENST00000542001 MUC15Q8N387 334 aa13.35□□□□□ -0.27
VARS2-212ENST00000542001 ANAPC10Q9UM13 185 aa13.35□□□□□ -0.27
VARS2-212ENST00000542001 EYSQ5T1H1 3165 aa13.35□□□□□ -0.27
VARS2-212ENST00000542001 NDUFA2O43678 99 aa13.35□□□□□ -0.27
VARS2-212ENST00000542001 SAA1P0DJI8 122 aaPredicted RBP13.35□□□□□ -0.27
VARS2-212ENST00000542001 HOXB1P14653 301 aaPredicted RBP13.35□□□□□ -0.27
VARS2-212ENST00000542001 Q6ZR03 302 aa13.35□□□□□ -0.27
VARS2-212ENST00000542001 PNKDQ8N490 385 aa13.35□□□□□ -0.27
VARS2-212ENST00000542001 OCC1Q8TAD7 63 aa13.35□□□□□ -0.27
VARS2-212ENST00000542001 NAGKQ9UJ70 344 aa13.35□□□□□ -0.27
VARS2-212ENST00000542001 USP9YO00507 2555 aaPredicted RBP13.35□□□□□ -0.27
VARS2-212ENST00000542001 LOC389332A0A1B0GUA5 103 aa13.35□□□□□ -0.27
VARS2-212ENST00000542001 FOXH1O75593 365 aa13.35□□□□□ -0.27
VARS2-212ENST00000542001 IGLV3-1P01715 115 aa13.35□□□□□ -0.27
VARS2-212ENST00000542001 C8orf88P0DMB2 117 aa13.35□□□□□ -0.27
VARS2-212ENST00000542001 PRSS3P2Q8NHM4 247 aa13.35□□□□□ -0.27
VARS2-212ENST00000542001 VAMP3Q15836 100 aa13.34□□□□□ -0.27
VARS2-212ENST00000542001 KHDC1LQ5JSQ8 128 aa13.34□□□□□ -0.27
VARS2-212ENST00000542001 ST6GALNAC3Q8NDV1 305 aa13.34□□□□□ -0.27
VARS2-212ENST00000542001 RAB1CQ92928 201 aa13.34□□□□□ -0.27
VARS2-212ENST00000542001 NEU1Q99519 415 aa13.34□□□□□ -0.27
VARS2-212ENST00000542001 IGKV1D-17A0A075B6S4 117 aa13.34□□□□□ -0.27
VARS2-212ENST00000542001 DIRC3C9JPN6 131 aa13.34□□□□□ -0.27
VARS2-212ENST00000542001 HYPMO75409 117 aa13.34□□□□□ -0.27
VARS2-212ENST00000542001 OR2J3O76001 311 aa13.34□□□□□ -0.27
VARS2-212ENST00000542001 WT1P19544 449 aaPredicted RBP13.34□□□□□ -0.27
VARS2-212ENST00000542001 GPR6P46095 362 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms