RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 NDUFA3O95167 84 aa22.11■■□□□ 1.13
CCM2-218ENST00000541586 BRS3P32247 399 aa22.11■■□□□ 1.13
CCM2-218ENST00000541586 PLGLAQ15195 96 aa22.11■■□□□ 1.13
CCM2-218ENST00000541586 TMEM170AQ8WVE7 144 aa22.11■■□□□ 1.13
CCM2-218ENST00000541586 DFFBO76075 338 aa22.1■■□□□ 1.13
CCM2-218ENST00000541586 SLC38A11Q08AI6 406 aa22.1■■□□□ 1.13
CCM2-218ENST00000541586 FAM74A1Q5RGS3 127 aa22.1■■□□□ 1.13
CCM2-218ENST00000541586 LILRB2Q8N423 598 aa22.1■■□□□ 1.13
CCM2-218ENST00000541586 TMED6Q8WW62 240 aa22.1■■□□□ 1.13
CCM2-218ENST00000541586 KIAA1456Q9P272 454 aa22.1■■□□□ 1.13
CCM2-218ENST00000541586 A0A1B0GW64 132 aa22.09■■□□□ 1.13
CCM2-218ENST00000541586 ACTL6BO94805 426 aa22.09■■□□□ 1.13
CCM2-218ENST00000541586 IGHV4-59P01825 116 aa22.09■■□□□ 1.13
CCM2-218ENST00000541586 FAM106CPP0CH98 169 aa22.09■■□□□ 1.13
CCM2-218ENST00000541586 MAS1LP35410 378 aa22.09■■□□□ 1.13
CCM2-218ENST00000541586 TNXAQ16473 311 aa22.09■■□□□ 1.13
CCM2-218ENST00000541586 LRRC75BQ2VPJ9 315 aa22.09■■□□□ 1.13
CCM2-218ENST00000541586 SLC24A4Q8NFF2 622 aa22.09■■□□□ 1.13
CCM2-218ENST00000541586 OR10P1Q8NGE3 313 aa22.09■■□□□ 1.13
CCM2-218ENST00000541586 H3BUX3 64 aa22.09■■□□□ 1.13
CCM2-218ENST00000541586 OR8U8P0C7N1 319 aa22.09■■□□□ 1.13
CCM2-218ENST00000541586 TMEM11P17152 192 aa22.09■■□□□ 1.13
CCM2-218ENST00000541586 IER3P46695 156 aa22.09■■□□□ 1.13
CCM2-218ENST00000541586 PCNPQ8WW12 178 aaKnown RBP22.09■■□□□ 1.13
CCM2-218ENST00000541586 GINS3Q9BRX5 216 aa22.09■■□□□ 1.13
CCM2-218ENST00000541586 PRDM13Q9H4Q3 707 aa22.09■■□□□ 1.13
CCM2-218ENST00000541586 FCN1O00602 326 aa22.08■■□□□ 1.12
CCM2-218ENST00000541586 COMPP49747 757 aaPredicted RBP22.08■■□□□ 1.12
CCM2-218ENST00000541586 A0A1W2PN81 502 aa22.07■■□□□ 1.12
CCM2-218ENST00000541586 RPS10-NUDT3A0A1W2PQS6 291 aa22.07■■□□□ 1.12
CCM2-218ENST00000541586 INS-IGF2F8WCM5 200 aa22.07■■□□□ 1.12
CCM2-218ENST00000541586 FBXO24O75426 580 aa22.07■■□□□ 1.12
CCM2-218ENST00000541586 CA2P00918 260 aa22.07■■□□□ 1.12
CCM2-218ENST00000541586 NPY1RP25929 384 aa22.07■■□□□ 1.12
CCM2-218ENST00000541586 CHRNA7P36544 502 aa22.07■■□□□ 1.12
CCM2-218ENST00000541586 GNB1P62873 340 aa22.07■■□□□ 1.12
CCM2-218ENST00000541586 LY6EQ16553 131 aa22.07■■□□□ 1.12
CCM2-218ENST00000541586 TUSC1Q2TAM9 212 aa22.07■■□□□ 1.12
CCM2-218ENST00000541586 HSD17B11Q8NBQ5 300 aa22.07■■□□□ 1.12
CCM2-218ENST00000541586 SSMEM1Q8WWF3 244 aa22.07■■□□□ 1.12
CCM2-218ENST00000541586 PINX1Q96BK5 328 aaKnown RBP22.07■■□□□ 1.12
CCM2-218ENST00000541586 RPL27AP46776 148 aaKnown RBP22.06■■□□□ 1.12
CCM2-218ENST00000541586 SSBP2P81877 361 aaPredicted RBP22.06■■□□□ 1.12
CCM2-218ENST00000541586 ETV3LQ6ZN32 361 aa22.06■■□□□ 1.12
CCM2-218ENST00000541586 BTBD17A6NE02 478 aa22.06■■□□□ 1.12
CCM2-218ENST00000541586 SCAF4O95104 1147 aaKnown RBP22.06■■□□□ 1.12
CCM2-218ENST00000541586 RAB14P61106 215 aa22.06■■□□□ 1.12
CCM2-218ENST00000541586 RAB11AP62491 216 aa22.06■■□□□ 1.12
CCM2-218ENST00000541586 C5orf64Q2M2E5 130 aa22.06■■□□□ 1.12
CCM2-218ENST00000541586 CLLU1Q5K131 121 aa22.06■■□□□ 1.12
CCM2-218ENST00000541586 EIF5AL1Q6IS14 154 aaKnown RBP22.06■■□□□ 1.12
CCM2-218ENST00000541586 ESM1Q9NQ30 184 aa22.06■■□□□ 1.12
CCM2-218ENST00000541586 PLXNB1O43157 2135 aa22.05■■□□□ 1.12
CCM2-218ENST00000541586 NCBP2LA6PVI3 153 aaKnown RBP22.05■■□□□ 1.12
CCM2-218ENST00000541586 ERHP84090 104 aaKnown RBP22.05■■□□□ 1.12
CCM2-218ENST00000541586 WT1-ASQ06250 92 aa22.05■■□□□ 1.12
CCM2-218ENST00000541586 ATP6V1FQ16864 119 aa22.05■■□□□ 1.12
CCM2-218ENST00000541586 BSXQ3C1V8 233 aa22.05■■□□□ 1.12
CCM2-218ENST00000541586 PIFOQ8TCI5 191 aa22.05■■□□□ 1.12
CCM2-218ENST00000541586 TCF21O43680 179 aa22.04■■□□□ 1.12
CCM2-218ENST00000541586 IFNA5P01569 189 aa22.04■■□□□ 1.12
CCM2-218ENST00000541586 IFNA4P05014 189 aa22.04■■□□□ 1.12
CCM2-218ENST00000541586 SH3BGRL3Q9H299 93 aa22.04■■□□□ 1.12
CCM2-218ENST00000541586 PRSS46E5RG02 174 aa22.03■■□□□ 1.12
CCM2-218ENST00000541586 SPP1P10451 314 aa22.03■■□□□ 1.12
CCM2-218ENST00000541586 SRSF2Q01130 221 aaKnown RBP22.03■■□□□ 1.12
CCM2-218ENST00000541586 SLC25A32Q9H2D1 315 aa22.03■■□□□ 1.12
CCM2-218ENST00000541586 DNAJC9-AS1A6NH13 148 aa22.03■■□□□ 1.12
CCM2-218ENST00000541586 NMBP08949 121 aa22.03■■□□□ 1.12
CCM2-218ENST00000541586 RNASE2P10153 161 aaKnown RBP22.03■■□□□ 1.12
CCM2-218ENST00000541586 ATP6V0CP27449 155 aa22.03■■□□□ 1.12
CCM2-218ENST00000541586 SNCAP37840 140 aa22.03■■□□□ 1.12
CCM2-218ENST00000541586 HILS1P60008 231 aa22.03■■□□□ 1.12
CCM2-218ENST00000541586 TMEM147Q9BVK8 224 aa22.03■■□□□ 1.12
CCM2-218ENST00000541586 SETD2Q9BYW2 2564 aaPredicted RBP22.02■■□□□ 1.12
CCM2-218ENST00000541586 IGLC7A0M8Q6 106 aa22.02■■□□□ 1.12
CCM2-218ENST00000541586 SEC11BP0C7V7 166 aa22.02■■□□□ 1.12
CCM2-218ENST00000541586 OR13C7P0DN81 318 aa22.02■■□□□ 1.12
CCM2-218ENST00000541586 ATP5IP56385 69 aaPredicted RBP22.02■■□□□ 1.12
CCM2-218ENST00000541586 AANATQ16613 207 aa22.02■■□□□ 1.12
CCM2-218ENST00000541586 C2orf83Q53S99 150 aa22.02■■□□□ 1.12
CCM2-218ENST00000541586 SLC25A24Q6NUK1 477 aa22.02■■□□□ 1.12
CCM2-218ENST00000541586 TMEM219Q86XT9 240 aa22.02■■□□□ 1.12
CCM2-218ENST00000541586 SRSF12Q8WXF0 261 aaKnown RBP22.02■■□□□ 1.12
CCM2-218ENST00000541586 UQCC1Q9NVA1 299 aa22.02■■□□□ 1.12
CCM2-218ENST00000541586 UBE2L5PA0A1B0GUS4 154 aa22.01■■□□□ 1.11
CCM2-218ENST00000541586 RUNX1Q01196 453 aa22.01■■□□□ 1.11
CCM2-218ENST00000541586 NDUFA5Q16718 116 aa22.01■■□□□ 1.11
CCM2-218ENST00000541586 OR5R1Q8NH85 324 aa22.01■■□□□ 1.11
CCM2-218ENST00000541586 PLA2G2EQ9NZK7 142 aa22.01■■□□□ 1.11
CCM2-218ENST00000541586 JMJD1CQ15652 2540 aa22.01■■□□□ 1.11
CCM2-218ENST00000541586 TEX22C9J3V5 150 aa22■■□□□ 1.11
CCM2-218ENST00000541586 VWC2Q2TAL6 325 aa22■■□□□ 1.11
CCM2-218ENST00000541586 SLC7A5P1Q8MH63 180 aa22■■□□□ 1.11
CCM2-218ENST00000541586 JMJD8Q96S16 334 aa22■■□□□ 1.11
CCM2-218ENST00000541586 C1RLQ9NZP8 487 aa22■■□□□ 1.11
CCM2-218ENST00000541586 RFNGQ9Y644 331 aa22■■□□□ 1.11
CCM2-218ENST00000541586 CNIH1O95406 144 aa22■■□□□ 1.11
CCM2-218ENST00000541586 Q8N9W7 124 aa22■■□□□ 1.11
CCM2-218ENST00000541586 SCGB1C1Q8TD33 95 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms