RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 TMEM222Q9H0R3 208 aa7.08□□□□□ -1.28
SNHG1-215ENST00000540904 KCNIP3Q9Y2W7 256 aa7.08□□□□□ -1.28
SNHG1-215ENST00000540904 DMRT1Q9Y5R6 373 aa7.08□□□□□ -1.28
SNHG1-215ENST00000540904 LINC00854A0A1B0GVQ3 168 aa7.07□□□□□ -1.28
SNHG1-215ENST00000540904 WI2-2373I1.2A0A1W2PRP0 233 aa7.07□□□□□ -1.28
SNHG1-215ENST00000540904 MFSD2BA6NFX1 497 aa7.07□□□□□ -1.28
SNHG1-215ENST00000540904 PPP5D1E7EU14 171 aa7.07□□□□□ -1.28
SNHG1-215ENST00000540904 ST8SIA3O43173 380 aa7.07□□□□□ -1.28
SNHG1-215ENST00000540904 CDS2O95674 445 aa7.07□□□□□ -1.28
SNHG1-215ENST00000540904 IFNA17P01571 189 aa7.07□□□□□ -1.28
SNHG1-215ENST00000540904 HLA-AP01891 365 aaKnown RBP7.07□□□□□ -1.28
SNHG1-215ENST00000540904 HSPE1P61604 102 aaKnown RBP7.07□□□□□ -1.28
SNHG1-215ENST00000540904 PRCDQ00LT1 54 aa7.07□□□□□ -1.28
SNHG1-215ENST00000540904 DHODHQ02127 395 aa7.07□□□□□ -1.28
SNHG1-215ENST00000540904 TATDN3Q17R31 274 aa7.07□□□□□ -1.28
SNHG1-215ENST00000540904 KLK9Q2XQG4 91 aa7.07□□□□□ -1.28
SNHG1-215ENST00000540904 SPINK9Q5DT21 86 aa7.07□□□□□ -1.28
SNHG1-215ENST00000540904 TMEM268Q5VZI3 342 aa7.07□□□□□ -1.28
SNHG1-215ENST00000540904 CLEC19AQ6UXS0 136 aa7.07□□□□□ -1.28
SNHG1-215ENST00000540904 ZNF429Q86V71 674 aa7.07□□□□□ -1.28
SNHG1-215ENST00000540904 OR9G4Q8NGQ1 327 aa7.07□□□□□ -1.28
SNHG1-215ENST00000540904 LHFPL5Q8TAF8 219 aa7.07□□□□□ -1.28
SNHG1-215ENST00000540904 DEDD2Q8WXF8 326 aa7.07□□□□□ -1.28
SNHG1-215ENST00000540904 RBPMSQ93062 196 aaKnown RBP7.07□□□□□ -1.28
SNHG1-215ENST00000540904 CXorf58Q96LI9 332 aa7.07□□□□□ -1.28
SNHG1-215ENST00000540904 CCDC140Q96MF4 163 aa7.07□□□□□ -1.28
SNHG1-215ENST00000540904 OR4C12Q96R67 309 aa7.07□□□□□ -1.28
SNHG1-215ENST00000540904 SDHCQ99643 169 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-215ENST00000540904 ELOVL1Q9BW60 279 aa7.07□□□□□ -1.28
SNHG1-215ENST00000540904 PLEKHA3Q9HB20 300 aa7.07□□□□□ -1.28
SNHG1-215ENST00000540904 PRR13Q9NZ81 148 aa7.07□□□□□ -1.28
SNHG1-215ENST00000540904 THYN1Q9P016 225 aa7.07□□□□□ -1.28
SNHG1-215ENST00000540904 ZMAT5Q9UDW3 170 aaKnown RBP7.07□□□□□ -1.28
SNHG1-215ENST00000540904 KLK9Q9UKQ9 250 aa7.07□□□□□ -1.28
SNHG1-215ENST00000540904 F11RQ9Y624 299 aaKnown RBP7.07□□□□□ -1.28
SNHG1-215ENST00000540904 TRBV7-1A0A0A6YYK4 115 aa7.06□□□□□ -1.28
SNHG1-215ENST00000540904 IGHV3-21A0A0B4J1V1 117 aa7.06□□□□□ -1.28
SNHG1-215ENST00000540904 A0A0G2JRQ6 117 aa7.06□□□□□ -1.28
SNHG1-215ENST00000540904 K7EIL1 84 aa7.06□□□□□ -1.28
SNHG1-215ENST00000540904 GGCTO75223 188 aaKnown RBP7.06□□□□□ -1.28
SNHG1-215ENST00000540904 OR2C1O95371 312 aa7.06□□□□□ -1.28
SNHG1-215ENST00000540904 LY86O95711 162 aa7.06□□□□□ -1.28
SNHG1-215ENST00000540904 ARL3P36405 182 aa7.06□□□□□ -1.28
SNHG1-215ENST00000540904 MFAP2P55001 183 aa7.06□□□□□ -1.28
SNHG1-215ENST00000540904 SUPT4H1P63272 117 aaKnown RBP7.06□□□□□ -1.28
SNHG1-215ENST00000540904 DEFB121Q5J5C9 76 aa7.06□□□□□ -1.28
SNHG1-215ENST00000540904 FAM209BQ5JX69 171 aa7.06□□□□□ -1.28
SNHG1-215ENST00000540904 HAPLN4Q86UW8 402 aa7.06□□□□□ -1.28
SNHG1-215ENST00000540904 SELENOHQ8IZQ5 122 aaKnown RBP7.06□□□□□ -1.28
SNHG1-215ENST00000540904 SLC35G3Q8N808 338 aa7.06□□□□□ -1.28
SNHG1-215ENST00000540904 GALNT14Q96FL9 552 aa7.06□□□□□ -1.28
SNHG1-215ENST00000540904 SLC25A21Q9BQT8 299 aaPredicted RBP7.06□□□□□ -1.28
SNHG1-215ENST00000540904 PDCD10Q9BUL8 212 aa7.06□□□□□ -1.28
SNHG1-215ENST00000540904 ZC4H2Q9NQZ6 224 aa7.06□□□□□ -1.28
SNHG1-215ENST00000540904 A6NHS1 94 aa7.05□□□□□ -1.28
SNHG1-215ENST00000540904 CLEC3BP05452 202 aa7.05□□□□□ -1.28
SNHG1-215ENST00000540904 ANXA3P12429 323 aa7.05□□□□□ -1.28
SNHG1-215ENST00000540904 IL7P13232 177 aa7.05□□□□□ -1.28
SNHG1-215ENST00000540904 VAMP1P23763 118 aa7.05□□□□□ -1.28
SNHG1-215ENST00000540904 GPR183P32249 361 aa7.05□□□□□ -1.28
SNHG1-215ENST00000540904 HOXA1P49639 335 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-215ENST00000540904 CCR6P51684 374 aa7.05□□□□□ -1.28
SNHG1-215ENST00000540904 ERHP84090 104 aaKnown RBP7.05□□□□□ -1.28
SNHG1-215ENST00000540904 TMEM187Q14656 261 aa7.05□□□□□ -1.28
SNHG1-215ENST00000540904 RBMS2Q15434 407 aaKnown RBP7.05□□□□□ -1.28
SNHG1-215ENST00000540904 CNPY1Q3B7I2 92 aa7.05□□□□□ -1.28
SNHG1-215ENST00000540904 TMEM128Q5BJH2 165 aa7.05□□□□□ -1.28
SNHG1-215ENST00000540904 IL34Q6ZMJ4 242 aa7.05□□□□□ -1.28
SNHG1-215ENST00000540904 Q6ZRM9 215 aa7.05□□□□□ -1.28
SNHG1-215ENST00000540904 FAM219AQ8IW50 185 aa7.05□□□□□ -1.28
SNHG1-215ENST00000540904 OR2C3Q8N628 320 aa7.05□□□□□ -1.28
SNHG1-215ENST00000540904 OR1L6Q8NGR2 347 aa7.05□□□□□ -1.28
SNHG1-215ENST00000540904 OR1P1Q8NH06 330 aa7.05□□□□□ -1.28
SNHG1-215ENST00000540904 ZNF502Q8TBZ5 544 aa7.05□□□□□ -1.28
SNHG1-215ENST00000540904 MISP3Q96FF7 219 aa7.05□□□□□ -1.28
SNHG1-215ENST00000540904 PRR25Q96S07 402 aa7.05□□□□□ -1.28
SNHG1-215ENST00000540904 CACNG5Q9UF02 275 aa7.05□□□□□ -1.28
SNHG1-215ENST00000540904 ZNF256Q9Y2P7 627 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-215ENST00000540904 TMEM56-RWDD3S4R434 201 aa7.05□□□□□ -1.28
SNHG1-215ENST00000540904 NAP1L6A6NFF2 107 aa7.04□□□□□ -1.28
SNHG1-215ENST00000540904 OR2T8A6NH00 312 aa7.04□□□□□ -1.28
SNHG1-215ENST00000540904 CENPXA8MT69 81 aa7.04□□□□□ -1.28
SNHG1-215ENST00000540904 K7EIM0 57 aa7.04□□□□□ -1.28
SNHG1-215ENST00000540904 NXPH3O95157 252 aa7.04□□□□□ -1.28
SNHG1-215ENST00000540904 CSN3P07498 182 aa7.04□□□□□ -1.28
SNHG1-215ENST00000540904 SNCAP37840 140 aa7.04□□□□□ -1.28
SNHG1-215ENST00000540904 SRPXP78539 464 aa7.04□□□□□ -1.28
SNHG1-215ENST00000540904 PLET1Q6UQ28 207 aa7.04□□□□□ -1.28
SNHG1-215ENST00000540904 LYZL2Q7Z4W2 148 aa7.04□□□□□ -1.28
SNHG1-215ENST00000540904 LGI3Q8N145 548 aa7.04□□□□□ -1.28
SNHG1-215ENST00000540904 CENPSQ8N2Z9 138 aa7.04□□□□□ -1.28
SNHG1-215ENST00000540904 UBAC2Q8NBM4 344 aa7.04□□□□□ -1.28
SNHG1-215ENST00000540904 VN1R17PQ8TDU5 208 aa7.04□□□□□ -1.28
SNHG1-215ENST00000540904 SCARB1Q8WTV0 552 aa7.04□□□□□ -1.28
SNHG1-215ENST00000540904 IL22RA2Q969J5 263 aa7.04□□□□□ -1.28
SNHG1-215ENST00000540904 PINX1Q96BK5 328 aaKnown RBP7.04□□□□□ -1.28
SNHG1-215ENST00000540904 GPR146Q96CH1 333 aa7.04□□□□□ -1.28
SNHG1-215ENST00000540904 ENY2Q9NPA8 101 aa7.04□□□□□ -1.28
SNHG1-215ENST00000540904 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-215ENST00000540904 C21orf62Q9NYP8 219 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms