RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 OR11H4Q8NGC9 324 aa5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 OR5B3Q8NH48 314 aa5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 OR5R1Q8NH85 324 aa5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 SMIM8Q96KF7 97 aa5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 RBM14Q96PK6 669 aaKnown RBP5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 CIB3Q96Q77 187 aaPredicted RBP5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 SLC25A33Q9BSK2 321 aa5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 RNF126Q9BV68 326 aa5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 MFFQ9GZY8 342 aa5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 PLEKHA3Q9HB20 300 aa5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 TMEM14BQ9NUH8 114 aa5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 TCF19Q9Y242 345 aa5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 ZNF257Q9Y2Q1 563 aa5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 HSPB11Q9Y547 144 aa5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 MXRA5Q9NR99 2828 aa5.29□□□□□ -1.56
CLTCL1-206ENST00000540896 A0A1W2PN81 502 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 A6NDX4 124 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 MSGN1A6NI15 193 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 G3V3Q6 166 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 H3BP45 60 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 HOXA3O43365 443 aaPredicted RBP5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 KCNAB3O43448 404 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 NDUFA3O95167 84 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 LY86O95711 162 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 CA2P00918 260 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 CRYGBP07316 175 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 C4BPBP20851 252 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 RPL12P30050 165 aaKnown RBP5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 CHRNA7P36544 502 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 SNCAP37840 140 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 IER3P46695 156 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 COMPP49747 757 aaPredicted RBP5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 TAS2R30P59541 319 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 ERHP84090 104 aaKnown RBP5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 FXYD3Q14802 87 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 SPANXN5Q5MJ07 72 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 ACOT7LQ6ZUV0 252 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 C9orf139Q6ZV77 190 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 STX12Q86Y82 276 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 OR2C3Q8N628 320 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 Q8N6K4 173 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 SIGLECL1Q8N7X8 197 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 PIFOQ8TCI5 191 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 SSMEM1Q8WWF3 244 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 SLC25A31Q9H0C2 315 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 PLSCR3Q9NRY6 295 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 CDC42EP3Q9UKI2 254 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 TNFSF18Q9UNG2 199 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 MOB4Q9Y3A3 225 aa5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 STRAPQ9Y3F4 350 aaKnown RBP5.28□□□□□ -1.56
CLTCL1-206ENST00000540896 A0A0D9SG52 128 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 FAM24AA6NFZ4 105 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 M0QZK8 103 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 FGF16O43320 207 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 TSC22D2O75157 780 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 CRLF1O75462 422 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 CST7O76096 145 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 IFNA4P05014 189 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 APELAP0DMC3 54 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 OR13C7P0DN81 318 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 HKR1P10072 659 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 LYL1P12980 280 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 SRD5A1P18405 259 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 SUB1P53999 127 aaKnown RBP eCLIP5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 PAX9P55771 341 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 RAB11AP62491 216 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 CX3CL1P78423 397 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 PRCDQ00LT1 54 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 TMEM267Q0VDI3 215 aaPredicted RBP5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 OR2F1Q13607 317 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 LGALSLQ3ZCW2 172 aaPredicted RBP5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 AARDQ4LEZ3 155 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 C10orf55Q5SWW7 151 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 ZNF562Q6V9R5 426 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 Q6YL49 198 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 TMUB2Q71RG4 321 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 C16orf82Q7Z2V1 217 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 Q8N9W7 124 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 OR10W1Q8NGF6 305 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 ARPC1AQ92747 370 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 ARL6Q9H0F7 186 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 PARP11Q9NR21 331 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 NDUFA4L2Q9NRX3 87 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 WSB1Q9Y6I7 421 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 U3KQ87 197 aa5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 ANK3Q12955 4377 aaKnown RBP5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 FN1P02751 2386 aaKnown RBP5.27□□□□□ -1.57
CLTCL1-206ENST00000540896 KANTRA0A1W2PQU2 76 aa5.26□□□□□ -1.57
CLTCL1-206ENST00000540896 IGSF23A1L1A6 192 aa5.26□□□□□ -1.57
CLTCL1-206ENST00000540896 SH2D7A6NKC9 451 aaPredicted RBP5.26□□□□□ -1.57
CLTCL1-206ENST00000540896 TMEM50AO95807 157 aa5.26□□□□□ -1.57
CLTCL1-206ENST00000540896 HLA-DRB1P01911 266 aa5.26□□□□□ -1.57
CLTCL1-206ENST00000540896 REG1AP05451 166 aa5.26□□□□□ -1.57
CLTCL1-206ENST00000540896 OR8U8P0C7N1 319 aa5.26□□□□□ -1.57
CLTCL1-206ENST00000540896 METTL15P1P0C7V9 234 aa5.26□□□□□ -1.57
CLTCL1-206ENST00000540896 DEFA4P12838 97 aa5.26□□□□□ -1.57
CLTCL1-206ENST00000540896 CXCL2P19875 107 aa5.26□□□□□ -1.57
CLTCL1-206ENST00000540896 NPY1RP25929 384 aa5.26□□□□□ -1.57
CLTCL1-206ENST00000540896 S100A11P31949 105 aa5.26□□□□□ -1.57
CLTCL1-206ENST00000540896 VDAC2P45880 294 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms