RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 A0A1W2PN81 502 aa8.25□□□□□ -1.09
VPS33A-204ENST00000540669 TMEM89A2RUT3 159 aa8.25□□□□□ -1.09
VPS33A-204ENST00000540669 C5orf51A6NDU8 294 aa8.25□□□□□ -1.09
VPS33A-204ENST00000540669 C15orf62A8K5M9 175 aa8.25□□□□□ -1.09
VPS33A-204ENST00000540669 PMS2P5A8MQ11 134 aa8.25□□□□□ -1.09
VPS33A-204ENST00000540669 H3BUA1 57 aa8.25□□□□□ -1.09
VPS33A-204ENST00000540669 TSC22D2O75157 780 aa8.25□□□□□ -1.09
VPS33A-204ENST00000540669 FBXO24O75426 580 aa8.25□□□□□ -1.09
VPS33A-204ENST00000540669 RBMXL2O75526 392 aaKnown RBP8.25□□□□□ -1.09
VPS33A-204ENST00000540669 IGHG4P01861 327 aa8.25□□□□□ -1.09
VPS33A-204ENST00000540669 PSMB6P28072 239 aa8.25□□□□□ -1.09
VPS33A-204ENST00000540669 CHRNA7P36544 502 aa8.25□□□□□ -1.09
VPS33A-204ENST00000540669 PROK1P58294 105 aa8.25□□□□□ -1.09
VPS33A-204ENST00000540669 SRSF2Q01130 221 aaKnown RBP8.25□□□□□ -1.09
VPS33A-204ENST00000540669 Q5BKY6 102 aa8.25□□□□□ -1.09
VPS33A-204ENST00000540669 PRSS54Q6PEW0 395 aa8.25□□□□□ -1.09
VPS33A-204ENST00000540669 TMEM14EPQ6UXP3 125 aa8.25□□□□□ -1.09
VPS33A-204ENST00000540669 LINC01006Q8NI28 216 aa8.25□□□□□ -1.09
VPS33A-204ENST00000540669 GRPEL2Q8TAA5 225 aa8.25□□□□□ -1.09
VPS33A-204ENST00000540669 DTD1Q8TEA8 209 aa8.25□□□□□ -1.09
VPS33A-204ENST00000540669 SMIM8Q96KF7 97 aa8.25□□□□□ -1.09
VPS33A-204ENST00000540669 FANCD2OSQ96PS1 177 aa8.25□□□□□ -1.09
VPS33A-204ENST00000540669 OR4C12Q96R67 309 aa8.25□□□□□ -1.09
VPS33A-204ENST00000540669 RAB40CQ96S21 281 aa8.25□□□□□ -1.09
VPS33A-204ENST00000540669 P2RX4Q99571 388 aa8.25□□□□□ -1.09
VPS33A-204ENST00000540669 MDFIQ99750 246 aa8.25□□□□□ -1.09
VPS33A-204ENST00000540669 PLEKHA3Q9HB20 300 aa8.25□□□□□ -1.09
VPS33A-204ENST00000540669 PARP11Q9NR21 331 aa8.25□□□□□ -1.09
VPS33A-204ENST00000540669 ZFP57Q9NU63 452 aa8.25□□□□□ -1.09
VPS33A-204ENST00000540669 F11RQ9Y624 299 aaKnown RBP8.25□□□□□ -1.09
VPS33A-204ENST00000540669 hCG_2014768A0A024R1R8 64 aa8.24□□□□□ -1.09
VPS33A-204ENST00000540669 TRAV41A0A0B4J266 112 aa8.24□□□□□ -1.09
VPS33A-204ENST00000540669 C13orf42A0A1B0GVH6 325 aa8.24□□□□□ -1.09
VPS33A-204ENST00000540669 MSGN1A6NI15 193 aa8.24□□□□□ -1.09
VPS33A-204ENST00000540669 FAM25EA8MYX2 175 aa8.24□□□□□ -1.09
VPS33A-204ENST00000540669 G3V318 75 aa8.24□□□□□ -1.09
VPS33A-204ENST00000540669 ACTL6BO94805 426 aa8.24□□□□□ -1.09
VPS33A-204ENST00000540669 SLC25A4P12235 298 aa8.24□□□□□ -1.09
VPS33A-204ENST00000540669 PSMB8P28062 276 aa8.24□□□□□ -1.09
VPS33A-204ENST00000540669 ATP5IP56385 69 aaPredicted RBP8.24□□□□□ -1.09
VPS33A-204ENST00000540669 GNB1P62873 340 aa8.24□□□□□ -1.09
VPS33A-204ENST00000540669 C2orf83Q53S99 150 aa8.24□□□□□ -1.09
VPS33A-204ENST00000540669 C19orf35Q6ZS72 473 aa8.24□□□□□ -1.09
VPS33A-204ENST00000540669 LFNGQ8NES3 379 aa8.24□□□□□ -1.09
VPS33A-204ENST00000540669 OR1P1Q8NH06 330 aa8.24□□□□□ -1.09
VPS33A-204ENST00000540669 TAF15Q92804 592 aaKnown RBP eCLIP8.24□□□□□ -1.09
VPS33A-204ENST00000540669 NOL4LQ96MY1 436 aaPredicted RBP8.24□□□□□ -1.09
VPS33A-204ENST00000540669 CIB3Q96Q77 187 aaPredicted RBP8.24□□□□□ -1.09
VPS33A-204ENST00000540669 RANGRFQ9HD47 186 aaPredicted RBP8.24□□□□□ -1.09
VPS33A-204ENST00000540669 LYRM2Q9NU23 88 aaPredicted RBP8.24□□□□□ -1.09
VPS33A-204ENST00000540669 OR5AC2Q9NZP5 309 aa8.24□□□□□ -1.09
VPS33A-204ENST00000540669 SSSCA1O60232 199 aa8.23□□□□□ -1.09
VPS33A-204ENST00000540669 MED6O75586 246 aa8.23□□□□□ -1.09
VPS33A-204ENST00000540669 NXPH3O95157 252 aa8.23□□□□□ -1.09
VPS33A-204ENST00000540669 IFNA17P01571 189 aa8.23□□□□□ -1.09
VPS33A-204ENST00000540669 OPN1MWP04001 364 aa8.23□□□□□ -1.09
VPS33A-204ENST00000540669 OPN1MW2P0DN77 364 aa8.23□□□□□ -1.09
VPS33A-204ENST00000540669 OPN1MW3P0DN78 364 aa8.23□□□□□ -1.09
VPS33A-204ENST00000540669 CD83Q01151 205 aa8.23□□□□□ -1.09
VPS33A-204ENST00000540669 CD300CQ08708 224 aa8.23□□□□□ -1.09
VPS33A-204ENST00000540669 KIAA0141Q14154 515 aaPredicted RBP8.23□□□□□ -1.09
VPS33A-204ENST00000540669 SPINK9Q5DT21 86 aa8.23□□□□□ -1.09
VPS33A-204ENST00000540669 HAPLN4Q86UW8 402 aa8.23□□□□□ -1.09
VPS33A-204ENST00000540669 SLC24A4Q8NFF2 622 aa8.23□□□□□ -1.09
VPS33A-204ENST00000540669 OR2T35Q8NGX2 323 aa8.23□□□□□ -1.09
VPS33A-204ENST00000540669 OR2T6Q8NHC8 308 aa8.23□□□□□ -1.09
VPS33A-204ENST00000540669 PDCD10Q9BUL8 212 aa8.23□□□□□ -1.09
VPS33A-204ENST00000540669 MAGT1Q9H0U3 335 aa8.23□□□□□ -1.09
VPS33A-204ENST00000540669 DNHD1Q96M86 4753 aa8.23□□□□□ -1.09
VPS33A-204ENST00000540669 RNF222A6NCQ9 220 aa8.22□□□□□ -1.09
VPS33A-204ENST00000540669 K7EIM0 57 aa8.22□□□□□ -1.09
VPS33A-204ENST00000540669 CNIH1O95406 144 aa8.22□□□□□ -1.09
VPS33A-204ENST00000540669 PET100P0DJ07 73 aa8.22□□□□□ -1.09
VPS33A-204ENST00000540669 OR13C7P0DN81 318 aa8.22□□□□□ -1.09
VPS33A-204ENST00000540669 NPY1RP25929 384 aa8.22□□□□□ -1.09
VPS33A-204ENST00000540669 HTR2BP41595 481 aa8.22□□□□□ -1.09
VPS33A-204ENST00000540669 HOXA1P49639 335 aaPredicted RBP8.22□□□□□ -1.09
VPS33A-204ENST00000540669 ECSCRQ19T08 205 aa8.22□□□□□ -1.09
VPS33A-204ENST00000540669 TCTEX1D4Q5JR98 221 aa8.22□□□□□ -1.09
VPS33A-204ENST00000540669 TMEM65Q6PI78 240 aa8.22□□□□□ -1.09
VPS33A-204ENST00000540669 C10orf99Q6UWK7 81 aa8.22□□□□□ -1.09
VPS33A-204ENST00000540669 AKAP14Q86UN6 197 aa8.22□□□□□ -1.09
VPS33A-204ENST00000540669 OR11H4Q8NGC9 324 aa8.22□□□□□ -1.09
VPS33A-204ENST00000540669 ZNF414Q96IQ9 312 aa8.22□□□□□ -1.09
VPS33A-204ENST00000540669 GSKIPQ9P0R6 139 aa8.22□□□□□ -1.09
VPS33A-204ENST00000540669 MBD2Q9UBB5 411 aa8.22□□□□□ -1.09
VPS33A-204ENST00000540669 U3KQ87 197 aa8.22□□□□□ -1.09
VPS33A-204ENST00000540669 CMYA5Q8N3K9 4069 aa8.21□□□□□ -1.1
VPS33A-204ENST00000540669 IGSF23A1L1A6 192 aa8.21□□□□□ -1.1
VPS33A-204ENST00000540669 CLPSL1A2RUU4 121 aa8.21□□□□□ -1.1
VPS33A-204ENST00000540669 CEBPZOSA8MTT3 80 aa8.21□□□□□ -1.1
VPS33A-204ENST00000540669 E5RGE8 158 aa8.21□□□□□ -1.1
VPS33A-204ENST00000540669 F8W735 103 aaPredicted RBP8.21□□□□□ -1.1
VPS33A-204ENST00000540669 I3L2K1 104 aa8.21□□□□□ -1.1
VPS33A-204ENST00000540669 C1QBP02746 253 aa8.21□□□□□ -1.1
VPS33A-204ENST00000540669 IAPPP10997 89 aa8.21□□□□□ -1.1
VPS33A-204ENST00000540669 MDKP21741 143 aaPredicted RBP8.21□□□□□ -1.1
VPS33A-204ENST00000540669 FCGR2BP31994 310 aaPredicted RBP8.21□□□□□ -1.1
VPS33A-204ENST00000540669 P2RY1P47900 373 aa8.21□□□□□ -1.1
VPS33A-204ENST00000540669 FGL1Q08830 312 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms