RNA–Protein interactions for RNA: ENST00000540352.5

MDM2-226, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-226ENST00000540352 SCN5AQ14524 2016 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 TRBV5-4A0A0C4DH59 114 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 SMIM28A0A1B0GU29 152 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 F2Z2F3 143 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 CCDC179H3BU77 68 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 SDCBPO00560 298 aaPredicted RBP3.91□□□□□ -1.78
MDM2-226ENST00000540352 DHRS3O75911 302 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 APOMO95445 188 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 IGHV3-7P01780 117 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 LGALS2P05162 132 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 RHOCP08134 193 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 CYBAP13498 195 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 GABRG2P18507 467 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 RPS12P25398 132 aaKnown RBP3.91□□□□□ -1.78
MDM2-226ENST00000540352 CD27P26842 260 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 PEBP1P30086 187 aaKnown RBP3.91□□□□□ -1.78
MDM2-226ENST00000540352 RGRP47804 291 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 XGP55808 180 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 SEC61GP60059 68 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 PFN3P60673 137 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 RPL27P61353 136 aaKnown RBP3.91□□□□□ -1.78
MDM2-226ENST00000540352 PSG4Q00888 419 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 ATP5G2Q06055 141 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 FHL1Q13642 323 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 EDDM3AQ14507 147 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 TMEM187Q14656 261 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 CDKN3Q16667 212 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 ODF3L2Q3SX64 289 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 TTC32Q5I0X7 151 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 UTF1Q5T230 341 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 OR4C11Q6IEV9 310 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 PRR22Q8IZ63 422 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 ZNF645Q8N7E2 425 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 RBMXL3Q8N7X1 1067 aaKnown RBP3.91□□□□□ -1.78
MDM2-226ENST00000540352 GRAPLQ8TC17 118 aaPredicted RBP3.91□□□□□ -1.78
MDM2-226ENST00000540352 LMX1AQ8TE12 382 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 GTSF1Q8WW33 167 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 LHX4Q969G2 390 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 PRSS27Q9BQR3 290 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 TTTY10Q9BZA0 68 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 KCNK15Q9H427 330 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 PELI2Q9HAT8 420 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 ZNF286AQ9HBT8 521 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 PRTFDC1Q9NRG1 225 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 KCNIP2Q9NS61 270 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 C20orf141Q9NUB4 165 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 SLC39A9Q9NUM3 307 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 HRASLS2Q9NWW9 162 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 MDFICQ9P1T7 246 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 OR2W1Q9Y3N9 320 aa3.91□□□□□ -1.78
MDM2-226ENST00000540352 SMCHD1A6NHR9 2005 aa3.9□□□□□ -1.78
MDM2-226ENST00000540352 TNRC6AQ8NDV7 1962 aaKnown RBP3.9□□□□□ -1.78
MDM2-226ENST00000540352 LTBP1Q14766 1721 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 IGKV6D-21A0A0A0MT36 114 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 CTXND1A0A1B0GTU2 59 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 A0A1W2PPI3 338 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 A0A1W2PPV9 198 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 FAM24AA6NFZ4 105 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 FOXI3A8MTJ6 420 aaPredicted RBP3.9□□□□□ -1.79
MDM2-226ENST00000540352 E9PLD3 99 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 C11orf98E9PRG8 122 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.9□□□□□ -1.79
MDM2-226ENST00000540352 RS1O15537 224 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 TNFSF12O43508 249 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 PRKNO60260 465 aaPredicted RBP3.9□□□□□ -1.79
MDM2-226ENST00000540352 NDUFB2O95178 105 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 NTN1O95631 604 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 APCSP02743 223 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 GYPBP06028 91 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 C8orf89P0DMQ9 161 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 ORM2P19652 201 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 NTF3P20783 257 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 BLVRBP30043 206 aaPredicted RBP3.9□□□□□ -1.79
MDM2-226ENST00000540352 GLRXP35754 106 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 ASIPP42127 132 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 KIR2DS2P43631 304 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 NKX2-1P43699 371 aaPredicted RBP3.9□□□□□ -1.79
MDM2-226ENST00000540352 IER3P46695 156 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 DLX6P56179 175 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 QRFPP83859 136 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 TNFAIP6P98066 277 aaPredicted RBP3.9□□□□□ -1.79
MDM2-226ENST00000540352 CXCL9Q07325 125 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 GAGE2BQ13066 116 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 ZNF726P1Q15940 193 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 CEACAM16Q2WEN9 425 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 GAGE2EQ4V326 116 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 MEIG1Q5JSS6 88 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 SERTAD4-AS1Q5TG53 156 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 ASPHD1Q5U4P2 390 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 SLC35E4Q6ICL7 350 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 EBLN2Q6P2I7 272 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.9□□□□□ -1.792e-7■□□□□ 10.1
MDM2-226ENST00000540352 TMEM219Q86XT9 240 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 LYPD6Q86Y78 171 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 ZNF114Q8NC26 417 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 OR9G1Q8NH87 305 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 SSC4DQ8WTU2 575 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 PPDPFLQ8WWR9 84 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 NAT6Q93015 286 aa3.9□□□□□ -1.79
MDM2-226ENST00000540352 RPEQ96AT9 228 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms