RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 REG1AP05451 166 aa9.27□□□□□ -0.93
PBX1-212ENST00000540236 VDAC2P45880 294 aaPredicted RBP9.27□□□□□ -0.93
PBX1-212ENST00000540236 COX19Q49B96 90 aa9.27□□□□□ -0.93
PBX1-212ENST00000540236 TMEM92Q6UXU6 159 aa9.27□□□□□ -0.93
PBX1-212ENST00000540236 CTHRC1Q96CG8 243 aa9.27□□□□□ -0.93
PBX1-212ENST00000540236 TRAV8-1A0A0A6YYK1 113 aa9.27□□□□□ -0.93
PBX1-212ENST00000540236 ST8SIA1Q92185 356 aa9.27□□□□□ -0.93
PBX1-212ENST00000540236 JMJD8Q96S16 334 aa9.27□□□□□ -0.93
PBX1-212ENST00000540236 UBE2ZQ9H832 354 aaPredicted RBP9.27□□□□□ -0.93
PBX1-212ENST00000540236 IGHV3OR15-7A0A075B7D8 119 aa9.27□□□□□ -0.93
PBX1-212ENST00000540236 TRGV10A0A0A0MS01 117 aa9.27□□□□□ -0.93
PBX1-212ENST00000540236 ZNF716A6NP11 495 aa9.27□□□□□ -0.93
PBX1-212ENST00000540236 EFEMP2O95967 443 aa9.27□□□□□ -0.93
PBX1-212ENST00000540236 EVI2AP22794 236 aa9.27□□□□□ -0.93
PBX1-212ENST00000540236 TICRRQ7Z2Z1 1910 aa9.27□□□□□ -0.93
PBX1-212ENST00000540236 IGKV1-12A0A0C4DH73 117 aa9.26□□□□□ -0.93
PBX1-212ENST00000540236 NCBP2LA6PVI3 153 aaKnown RBP9.26□□□□□ -0.93
PBX1-212ENST00000540236 AHRRA9YTQ3 701 aa9.26□□□□□ -0.93
PBX1-212ENST00000540236 IGKV1D-12P01611 117 aa9.26□□□□□ -0.93
PBX1-212ENST00000540236 RPL13AP40429 203 aaKnown RBP9.26□□□□□ -0.93
PBX1-212ENST00000540236 KCNE4Q8WWG9 221 aa9.26□□□□□ -0.93
PBX1-212ENST00000540236 IL23AQ9NPF7 189 aa9.26□□□□□ -0.93
PBX1-212ENST00000540236 FGFBP3Q8TAT2 258 aa9.26□□□□□ -0.93
PBX1-212ENST00000540236 ZNF296Q8WUU4 475 aaPredicted RBP9.26□□□□□ -0.93
PBX1-212ENST00000540236 FAM168AQ92567 244 aa9.26□□□□□ -0.93
PBX1-212ENST00000540236 RPEQ96AT9 228 aa9.26□□□□□ -0.93
PBX1-212ENST00000540236 RTL8AQ9BWD3 113 aa9.26□□□□□ -0.93
PBX1-212ENST00000540236 EPDR1Q9UM22 224 aa9.26□□□□□ -0.93
PBX1-212ENST00000540236 AMMECR1Q9Y4X0 333 aaPredicted RBP9.26□□□□□ -0.93
PBX1-212ENST00000540236 TNRC6AQ8NDV7 1962 aaKnown RBP9.26□□□□□ -0.93
PBX1-212ENST00000540236 ACP7Q6ZNF0 438 aa9.26□□□□□ -0.93
PBX1-212ENST00000540236 ACP1P24666 158 aa9.26□□□□□ -0.93
PBX1-212ENST00000540236 DRD3P35462 400 aa9.26□□□□□ -0.93
PBX1-212ENST00000540236 COA6Q5JTJ3 125 aaKnown RBP9.26□□□□□ -0.93
PBX1-212ENST00000540236 FAM53AQ6NSI3 398 aaPredicted RBP9.26□□□□□ -0.93
PBX1-212ENST00000540236 SPEM1Q8N4L4 309 aa9.26□□□□□ -0.93
PBX1-212ENST00000540236 NPIPB3Q92617 1050 aa9.25□□□□□ -0.93
PBX1-212ENST00000540236 TMEM189A5PLL7 270 aa9.25□□□□□ -0.93
PBX1-212ENST00000540236 MYOD1P15172 320 aa9.25□□□□□ -0.93
PBX1-212ENST00000540236 NPPCP23582 126 aa9.25□□□□□ -0.93
PBX1-212ENST00000540236 VEGFBP49765 207 aa9.25□□□□□ -0.93
PBX1-212ENST00000540236 NMSQ5H8A3 153 aa9.25□□□□□ -0.93
PBX1-212ENST00000540236 WIPI1Q5MNZ9 446 aaPredicted RBP9.25□□□□□ -0.93
PBX1-212ENST00000540236 CDX2Q99626 313 aaPredicted RBP9.25□□□□□ -0.93
PBX1-212ENST00000540236 FOXS1O43638 330 aa9.25□□□□□ -0.93
PBX1-212ENST00000540236 ZFAND5O76080 213 aa9.25□□□□□ -0.93
PBX1-212ENST00000540236 CTGFP29279 349 aa9.25□□□□□ -0.93
PBX1-212ENST00000540236 CKS2P33552 79 aa9.25□□□□□ -0.93
PBX1-212ENST00000540236 LOXL3P58215 753 aa9.25□□□□□ -0.93
PBX1-212ENST00000540236 RIGQ13278 110 aa9.25□□□□□ -0.93
PBX1-212ENST00000540236 KIAA1549Q9HCM3 1950 aa9.25□□□□□ -0.93
PBX1-212ENST00000540236 IGKV1-5P01602 117 aa9.25□□□□□ -0.93
PBX1-212ENST00000540236 SRD5A2P31213 254 aa9.25□□□□□ -0.93
PBX1-212ENST00000540236 ZNF645Q8N7E2 425 aa9.25□□□□□ -0.93
PBX1-212ENST00000540236 RND1Q92730 232 aa9.25□□□□□ -0.93
PBX1-212ENST00000540236 FER1L6-AS2Q96M78 137 aa9.25□□□□□ -0.93
PBX1-212ENST00000540236 HS3ST6Q96QI5 342 aa9.25□□□□□ -0.93
PBX1-212ENST00000540236 SMKR1H3BMG3 65 aa9.25□□□□□ -0.93
PBX1-212ENST00000540236 KLRB1Q12918 225 aa9.24□□□□□ -0.93
PBX1-212ENST00000540236 SPATA12Q7Z6I5 190 aa9.24□□□□□ -0.93
PBX1-212ENST00000540236 TM4SF19Q96DZ7 209 aa9.24□□□□□ -0.93
PBX1-212ENST00000540236 PLXNB2O15031 1838 aa9.24□□□□□ -0.93
PBX1-212ENST00000540236 TMEM30CPA0ZSE6 113 aa9.24□□□□□ -0.93
PBX1-212ENST00000540236 CX3CL1P78423 397 aa9.24□□□□□ -0.93
PBX1-212ENST00000540236 ABHD17BQ5VST6 288 aa9.24□□□□□ -0.93
PBX1-212ENST00000540236 COMMD5Q9GZQ3 224 aa9.24□□□□□ -0.93
PBX1-212ENST00000540236 ATG2BQ96BY7 2078 aa9.24□□□□□ -0.93
PBX1-212ENST00000540236 TMEM238LA0A1B0GVL6 79 aa9.24□□□□□ -0.93
PBX1-212ENST00000540236 COL8A2P25067 703 aa9.24□□□□□ -0.93
PBX1-212ENST00000540236 C10orf126Q8N4M7 172 aa9.24□□□□□ -0.93
PBX1-212ENST00000540236 TMEM178AQ8NBL3 297 aa9.24□□□□□ -0.93
PBX1-212ENST00000540236 MGST2Q99735 147 aa9.24□□□□□ -0.93
PBX1-212ENST00000540236 V9GYV3 84 aa9.24□□□□□ -0.93
PBX1-212ENST00000540236 FREM3P0C091 2139 aa9.24□□□□□ -0.93
PBX1-212ENST00000540236 TRPM6Q9BX84 2022 aa9.24□□□□□ -0.93
PBX1-212ENST00000540236 TNFRSF1AP19438 455 aa9.24□□□□□ -0.93
PBX1-212ENST00000540236 RPL39P5Q59GN2 51 aa9.24□□□□□ -0.93
PBX1-212ENST00000540236 RNFT1Q5M7Z0 435 aa9.24□□□□□ -0.93
PBX1-212ENST00000540236 OR2H2O95918 312 aa9.24□□□□□ -0.93
PBX1-212ENST00000540236 WNT2P09544 360 aa9.24□□□□□ -0.93
PBX1-212ENST00000540236 GAGE2BQ13066 116 aa9.24□□□□□ -0.93
PBX1-212ENST00000540236 GAGE2EQ4V326 116 aa9.24□□□□□ -0.93
PBX1-212ENST00000540236 HARBI1Q96MB7 349 aa9.24□□□□□ -0.93
PBX1-212ENST00000540236 GAGE2DQ9UEU5 116 aa9.24□□□□□ -0.93
PBX1-212ENST00000540236 DOCK6Q96HP0 2047 aa9.24□□□□□ -0.93
PBX1-212ENST00000540236 MLNRO43193 412 aa9.23□□□□□ -0.93
PBX1-212ENST00000540236 NCR2O95944 276 aa9.23□□□□□ -0.93
PBX1-212ENST00000540236 LEPP41159 167 aa9.23□□□□□ -0.93
PBX1-212ENST00000540236 REG1BP48304 166 aa9.23□□□□□ -0.93
PBX1-212ENST00000540236 YAE1D1Q9NRH1 226 aa9.23□□□□□ -0.93
PBX1-212ENST00000540236 KIR2DS5A0A0G2JLQ3 304 aa9.23□□□□□ -0.93
PBX1-212ENST00000540236 A0A0G2JNG1 304 aa9.23□□□□□ -0.93
PBX1-212ENST00000540236 KIR2DS3K7RE56 304 aa9.23□□□□□ -0.93
PBX1-212ENST00000540236 DUX1O43812 170 aa9.23□□□□□ -0.93
PBX1-212ENST00000540236 YPEL3P61236 119 aaPredicted RBP9.23□□□□□ -0.93
PBX1-212ENST00000540236 KIR2DS5Q14953 304 aa9.23□□□□□ -0.93
PBX1-212ENST00000540236 SLC25A47Q6Q0C1 308 aa9.23□□□□□ -0.93
PBX1-212ENST00000540236 C1RLQ9NZP8 487 aa9.23□□□□□ -0.93
PBX1-212ENST00000540236 EFNB3Q15768 340 aa9.23□□□□□ -0.93
PBX1-212ENST00000540236 OR2H1Q9GZK4 316 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms