RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 PRR13Q9NZ81 148 aa17.02■□□□□ 0.32
TRIM65-202ENST00000540128 DMRT1Q9Y5R6 373 aa17.02■□□□□ 0.32
TRIM65-202ENST00000540128 IGHV4OR15-8A0A075B7B6 117 aa17.01■□□□□ 0.31
TRIM65-202ENST00000540128 A0A087WW49 117 aa17.01■□□□□ 0.31
TRIM65-202ENST00000540128 DUXBA0A1W2PPF3 345 aa17.01■□□□□ 0.31
TRIM65-202ENST00000540128 UPK1BO75841 260 aa17.01■□□□□ 0.31
TRIM65-202ENST00000540128 NDUFB8O95169 186 aa17.01■□□□□ 0.31
TRIM65-202ENST00000540128 DUS4LO95620 317 aaKnown RBP17.01■□□□□ 0.31
TRIM65-202ENST00000540128 VAMP1P23763 118 aa17.01■□□□□ 0.31
TRIM65-202ENST00000540128 ASAH1Q13510 395 aa17.01■□□□□ 0.31
TRIM65-202ENST00000540128 C15orf32Q32M92 178 aa17.01■□□□□ 0.31
TRIM65-202ENST00000540128 ANKRD55Q3KP44 614 aa17.01■□□□□ 0.31
TRIM65-202ENST00000540128 PDLIM3Q53GG5 364 aaPredicted RBP17.01■□□□□ 0.31
TRIM65-202ENST00000540128 NMSQ5H8A3 153 aa17.01■□□□□ 0.31
TRIM65-202ENST00000540128 FAM209BQ5JX69 171 aa17.01■□□□□ 0.31
TRIM65-202ENST00000540128 LYZL2Q7Z4W2 148 aa17.01■□□□□ 0.31
TRIM65-202ENST00000540128 TBC1D24Q9ULP9 559 aa17.01■□□□□ 0.31
TRIM65-202ENST00000540128 F11RQ9Y624 299 aaKnown RBP17.01■□□□□ 0.31
TRIM65-202ENST00000540128 OR1L6Q8NGR2 347 aa17■□□□□ 0.31
TRIM65-202ENST00000540128 MCRIP2Q9BUT9 160 aaKnown RBP17■□□□□ 0.31
TRIM65-202ENST00000540128 PEF1Q9UBV8 284 aaKnown RBP17■□□□□ 0.31
TRIM65-202ENST00000540128 CACNG5Q9UF02 275 aa17■□□□□ 0.31
TRIM65-202ENST00000540128 CACFD1Q9UGQ2 172 aa17■□□□□ 0.31
TRIM65-202ENST00000540128 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.99■□□□□ 0.31
TRIM65-202ENST00000540128 C9orf170A2RU37 121 aa16.99■□□□□ 0.31
TRIM65-202ENST00000540128 CYB5BO43169 146 aa16.99■□□□□ 0.31
TRIM65-202ENST00000540128 TCRBP04435 133 aa16.99■□□□□ 0.31
TRIM65-202ENST00000540128 IGLL1P15814 213 aa16.99■□□□□ 0.31
TRIM65-202ENST00000540128 MECP2P51608 486 aaKnown RBP16.99■□□□□ 0.31
TRIM65-202ENST00000540128 MFAP2P55001 183 aa16.99■□□□□ 0.31
TRIM65-202ENST00000540128 SPCS3P61009 180 aa16.99■□□□□ 0.31
TRIM65-202ENST00000540128 IFITM3Q01628 133 aa16.99■□□□□ 0.31
TRIM65-202ENST00000540128 KPRPQ5T749 579 aaPredicted RBP16.99■□□□□ 0.31
TRIM65-202ENST00000540128 ZNF114Q8NC26 417 aa16.99■□□□□ 0.31
TRIM65-202ENST00000540128 OR1P1Q8NH06 330 aa16.99■□□□□ 0.31
TRIM65-202ENST00000540128 PLEKHA3Q9HB20 300 aa16.99■□□□□ 0.31
TRIM65-202ENST00000540128 THYN1Q9P016 225 aa16.99■□□□□ 0.31
TRIM65-202ENST00000540128 ANKRD34BA5PLL1 514 aa16.98■□□□□ 0.31
TRIM65-202ENST00000540128 IFNA17P01571 189 aa16.98■□□□□ 0.31
TRIM65-202ENST00000540128 ZP3P21754 424 aa16.98■□□□□ 0.31
TRIM65-202ENST00000540128 RAB25P57735 213 aa16.98■□□□□ 0.31
TRIM65-202ENST00000540128 ERHP84090 104 aaKnown RBP16.98■□□□□ 0.31
TRIM65-202ENST00000540128 EXOSC2Q13868 293 aaKnown RBP16.98■□□□□ 0.31
TRIM65-202ENST00000540128 OXLD1Q5BKU9 147 aa16.98■□□□□ 0.31
TRIM65-202ENST00000540128 PDCD10Q9BUL8 212 aa16.98■□□□□ 0.31
TRIM65-202ENST00000540128 G3V4G9 280 aa16.97■□□□□ 0.31
TRIM65-202ENST00000540128 TRBV12-3P01733 135 aa16.97■□□□□ 0.31
TRIM65-202ENST00000540128 OR4E1P0C645 316 aa16.97■□□□□ 0.31
TRIM65-202ENST00000540128 SULT1A3P0DMM9 295 aa16.97■□□□□ 0.31
TRIM65-202ENST00000540128 SULT1A4P0DMN0 295 aa16.97■□□□□ 0.31
TRIM65-202ENST00000540128 SLC25A24Q6NUK1 477 aa16.97■□□□□ 0.31
TRIM65-202ENST00000540128 MZT2BQ6NZ67 158 aa16.97■□□□□ 0.31
TRIM65-202ENST00000540128 VN1R17PQ8TDU5 208 aa16.97■□□□□ 0.31
TRIM65-202ENST00000540128 DCUN1D4Q92564 292 aa16.97■□□□□ 0.31
TRIM65-202ENST00000540128 DLX4Q92988 240 aaPredicted RBP16.97■□□□□ 0.31
TRIM65-202ENST00000540128 CXorf58Q96LI9 332 aa16.97■□□□□ 0.31
TRIM65-202ENST00000540128 A0A1B0GU03 582 aa16.96■□□□□ 0.31
TRIM65-202ENST00000540128 WIPF1O43516 503 aa16.96■□□□□ 0.31
TRIM65-202ENST00000540128 SLC25A6P12236 298 aa16.96■□□□□ 0.31
TRIM65-202ENST00000540128 ANXA7P20073 488 aaKnown RBP16.96■□□□□ 0.31
TRIM65-202ENST00000540128 HOXD3P31249 432 aaPredicted RBP16.96■□□□□ 0.31
TRIM65-202ENST00000540128 SLURP1P55000 103 aa16.96■□□□□ 0.31
TRIM65-202ENST00000540128 DHRS2Q13268 280 aa16.96■□□□□ 0.31
TRIM65-202ENST00000540128 PVRIGQ6DKI7 326 aa16.96■□□□□ 0.31
TRIM65-202ENST00000540128 LYG2Q86SG7 212 aa16.96■□□□□ 0.31
TRIM65-202ENST00000540128 EEF1AKMT3Q96AZ1 226 aa16.96■□□□□ 0.31
TRIM65-202ENST00000540128 GPR61Q9BZJ8 451 aa16.96■□□□□ 0.31
TRIM65-202ENST00000540128 C20orf85Q9H1P6 137 aa16.96■□□□□ 0.31
TRIM65-202ENST00000540128 TRBV7-1A0A0A6YYK4 115 aa16.95■□□□□ 0.3
TRIM65-202ENST00000540128 HLA-AP01891 365 aaKnown RBP16.95■□□□□ 0.3
TRIM65-202ENST00000540128 KLF5Q13887 457 aaPredicted RBP16.95■□□□□ 0.3
TRIM65-202ENST00000540128 SMCO1Q147U7 214 aa16.95■□□□□ 0.3
TRIM65-202ENST00000540128 BEAN1Q3B7T3 259 aa16.95■□□□□ 0.3
TRIM65-202ENST00000540128 SPINK9Q5DT21 86 aa16.95■□□□□ 0.3
TRIM65-202ENST00000540128 CCDC140Q96MF4 163 aa16.95■□□□□ 0.3
TRIM65-202ENST00000540128 TMED3Q9Y3Q3 217 aa16.95■□□□□ 0.3
TRIM65-202ENST00000540128 FAM240BA0A1B0GVZ2 78 aa16.94■□□□□ 0.3
TRIM65-202ENST00000540128 BMPR1BO00238 502 aa16.94■□□□□ 0.3
TRIM65-202ENST00000540128 OVOL1O14753 267 aa16.94■□□□□ 0.3
TRIM65-202ENST00000540128 PITX3O75364 302 aa16.94■□□□□ 0.3
TRIM65-202ENST00000540128 ZNF502Q8TBZ5 544 aa16.94■□□□□ 0.3
TRIM65-202ENST00000540128 ATP6V0BQ99437 205 aa16.94■□□□□ 0.3
TRIM65-202ENST00000540128 MFSD2BA6NFX1 497 aa16.93■□□□□ 0.3
TRIM65-202ENST00000540128 BSXQ3C1V8 233 aa16.93■□□□□ 0.3
TRIM65-202ENST00000540128 C4orf46Q504U0 113 aa16.93■□□□□ 0.3
TRIM65-202ENST00000540128 C1QL4Q86Z23 238 aa16.93■□□□□ 0.3
TRIM65-202ENST00000540128 ENY2Q9NPA8 101 aa16.93■□□□□ 0.3
TRIM65-202ENST00000540128 HSPB7Q9UBY9 170 aa16.93■□□□□ 0.3
TRIM65-202ENST00000540128 K7EIM0 57 aa16.92■□□□□ 0.3
TRIM65-202ENST00000540128 SNCAP37840 140 aa16.92■□□□□ 0.3
TRIM65-202ENST00000540128 HOXA1P49639 335 aaPredicted RBP16.92■□□□□ 0.3
TRIM65-202ENST00000540128 COQ8AQ8NI60 647 aa16.92■□□□□ 0.3
TRIM65-202ENST00000540128 MITD1Q8WV92 249 aa16.92■□□□□ 0.3
TRIM65-202ENST00000540128 NUDT15Q9NV35 164 aa16.92■□□□□ 0.3
TRIM65-202ENST00000540128 I3L2K1 104 aa16.91■□□□□ 0.3
TRIM65-202ENST00000540128 CLEC3BP05452 202 aa16.91■□□□□ 0.3
TRIM65-202ENST00000540128 H2AFB2P0C5Z0 115 aa16.91■□□□□ 0.3
TRIM65-202ENST00000540128 RNASE2P10153 161 aaKnown RBP16.91■□□□□ 0.3
TRIM65-202ENST00000540128 SUB1P53999 127 aaKnown RBP eCLIP16.91■□□□□ 0.3
TRIM65-202ENST00000540128 TNFRSF9Q07011 255 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms