RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 J3QT63 122 aa6.33□□□□□ -1.4
CCDC60-204ENST00000539847 NUPR1O60356 82 aa6.33□□□□□ -1.4
CCDC60-204ENST00000539847 TOMM40O96008 361 aa6.33□□□□□ -1.4
CCDC60-204ENST00000539847 NPSP0C0P6 89 aa6.33□□□□□ -1.4
CCDC60-204ENST00000539847 OR5G3P0C626 314 aa6.33□□□□□ -1.4
CCDC60-204ENST00000539847 STAG3L2P0CL84 134 aa6.33□□□□□ -1.4
CCDC60-204ENST00000539847 STAG3L3P0CL85 134 aa6.33□□□□□ -1.4
CCDC60-204ENST00000539847 TIMP3P35625 211 aa6.33□□□□□ -1.4
CCDC60-204ENST00000539847 CHRNA7P36544 502 aa6.33□□□□□ -1.4
CCDC60-204ENST00000539847 PCP4P48539 62 aa6.33□□□□□ -1.4
CCDC60-204ENST00000539847 PRRX1P54821 245 aa6.33□□□□□ -1.4
CCDC60-204ENST00000539847 RASL11AQ6T310 242 aa6.33□□□□□ -1.4
CCDC60-204ENST00000539847 MRPL21Q7Z2W9 205 aaKnown RBP6.33□□□□□ -1.4
CCDC60-204ENST00000539847 DRAM1Q8N682 238 aa6.33□□□□□ -1.4
CCDC60-204ENST00000539847 ZNF645Q8N7E2 425 aa6.33□□□□□ -1.4
CCDC60-204ENST00000539847 SIGLECL1Q8N7X8 197 aa6.33□□□□□ -1.4
CCDC60-204ENST00000539847 OR2M7Q8NG81 312 aa6.33□□□□□ -1.4
CCDC60-204ENST00000539847 FAM173AQ9BQD7 235 aa6.33□□□□□ -1.4
CCDC60-204ENST00000539847 SRXN1Q9BYN0 137 aa6.33□□□□□ -1.4
CCDC60-204ENST00000539847 TTTY12Q9BZ98 90 aa6.33□□□□□ -1.4
CCDC60-204ENST00000539847 FGF23Q9GZV9 251 aaPredicted RBP6.33□□□□□ -1.4
CCDC60-204ENST00000539847 OPN3Q9H1Y3 402 aaPredicted RBP6.33□□□□□ -1.4
CCDC60-204ENST00000539847 PLA2G2DQ9UNK4 145 aa6.33□□□□□ -1.4
CCDC60-204ENST00000539847 FAM215AQ9Y5M1 114 aa6.33□□□□□ -1.4
CCDC60-204ENST00000539847 A0A0G2JNJ9 132 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 A0A1W2PN81 502 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 A0A1W2PPV4 95 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 NKX6-3A6NJ46 265 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 ANKRD30BLA7E2S9 258 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 ZNHIT1O43257 154 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 TNFSF12O43508 249 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 ZNF253O75346 499 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 NDUFB4O95168 129 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 TNFRSF6BO95407 300 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 RAC2P15153 192 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 B4GALT1P15291 398 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 CDKN1BP46527 198 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 RAB7AP51149 207 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 GPM6AP51674 278 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 ATP5IP56385 69 aaPredicted RBP6.32□□□□□ -1.4
CCDC60-204ENST00000539847 ERVK11-1P61568 191 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 PLGLB1Q02325 96 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 TGFBR3Q03167 851 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 ZNF90Q03938 601 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 ZNF146Q15072 292 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 PMCHL1Q16048 86 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 PRSS8Q16651 343 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 DEFB113Q30KQ7 82 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 FAM162BQ5T6X4 162 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 C1orf185Q5T7R7 199 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 PRAMEF20Q5VT98 475 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 CST9LP1Q5W188 147 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 OR8G2PQ6IF36 304 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 GGNQ86UU5 652 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 BCL6BQ8N143 479 aaPredicted RBP6.32□□□□□ -1.4
CCDC60-204ENST00000539847 RPRMLQ8N4K4 120 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 Q8N7P7 452 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 CPEB3Q8NE35 698 aaKnown RBP6.32□□□□□ -1.4
CCDC60-204ENST00000539847 SPATA3Q8NHX4 192 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 FGFBP3Q8TAT2 258 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 DTD1Q8TEA8 209 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 NRGNQ92686 78 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 RNASE6Q93091 150 aaKnown RBP6.32□□□□□ -1.4
CCDC60-204ENST00000539847 UHRF2Q96PU4 802 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 HSPB9Q9BQS6 159 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 SFXN3Q9BWM7 321 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 SLC25A22Q9H936 323 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 OSTCQ9NRP0 149 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 DEPPQ9NTK1 212 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 TMEM140Q9NV12 185 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 BEX4Q9NWD9 120 aaPredicted RBP6.32□□□□□ -1.4
CCDC60-204ENST00000539847 MRPL27Q9P0M9 148 aaKnown RBP6.32□□□□□ -1.4
CCDC60-204ENST00000539847 Q9UFV3 132 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 TP53TG3Q9ULZ0 132 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 TBL2Q9Y4P3 447 aaKnown RBP6.32□□□□□ -1.4
CCDC60-204ENST00000539847 ARID1AO14497 2285 aa6.32□□□□□ -1.4
CCDC60-204ENST00000539847 IGHV3-15A0A0B4J1V0 119 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 MBD3L4A6NDZ8 208 aaPredicted RBP6.31□□□□□ -1.4
CCDC60-204ENST00000539847 MBD3L3A6NE82 208 aaPredicted RBP6.31□□□□□ -1.4
CCDC60-204ENST00000539847 SH2D1BO14796 132 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 IGLC2P0DOY2 106 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 IGLC3P0DOY3 106 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 CCL3P10147 92 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 BMP5P22003 454 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 COMPP49747 757 aaPredicted RBP6.31□□□□□ -1.4
CCDC60-204ENST00000539847 LINC00310P59036 64 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 RHOBP62745 196 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 CX3CL1P78423 397 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 UBE2V1Q13404 147 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 OR5I1Q13606 314 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 RTL8BQ17RB0 113 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 HLA-DRB5Q30154 266 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 ZNF718Q3SXZ3 478 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 LEMD1Q68G75 181 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 TMEM200BQ69YZ2 307 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 SLC35E4Q6ICL7 350 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 BAGE3Q86Y29 109 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 BAGE2Q86Y30 109 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 C17orf78Q8N4C9 275 aa6.31□□□□□ -1.4
CCDC60-204ENST00000539847 TMEM251Q8N6I4 163 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms