RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 SSBP3Q9BWW4 388 aaPredicted RBP16.63■□□□□ 0.25
TMEM260-203ENST00000539559 JPT1Q9UK76 154 aa16.63■□□□□ 0.25
TMEM260-203ENST00000539559 SAA2-SAA4A0A096LPE2 208 aa16.63■□□□□ 0.25
TMEM260-203ENST00000539559 SAA2P0DJI9 122 aaPredicted RBP16.63■□□□□ 0.25
TMEM260-203ENST00000539559 GNG10P50151 68 aa16.63■□□□□ 0.25
TMEM260-203ENST00000539559 ZNF83P51522 516 aa16.63■□□□□ 0.25
TMEM260-203ENST00000539559 SUMO1P63165 101 aaKnown RBP16.63■□□□□ 0.25
TMEM260-203ENST00000539559 SRSF6Q13247 344 aaKnown RBP16.63■□□□□ 0.25
TMEM260-203ENST00000539559 IGF2-ASQ6U949 168 aa16.63■□□□□ 0.25
TMEM260-203ENST00000539559 TMEM136Q6ZRR5 245 aa16.63■□□□□ 0.25
TMEM260-203ENST00000539559 SFXN3Q9BWM7 321 aa16.63■□□□□ 0.25
TMEM260-203ENST00000539559 A0A1W2PS18 150 aa16.63■□□□□ 0.25
TMEM260-203ENST00000539559 GGTLC3B5MD39 225 aa16.63■□□□□ 0.25
TMEM260-203ENST00000539559 ZNF253O75346 499 aa16.63■□□□□ 0.25
TMEM260-203ENST00000539559 MT-CO2P00403 227 aa16.63■□□□□ 0.25
TMEM260-203ENST00000539559 CCL11P51671 97 aa16.63■□□□□ 0.25
TMEM260-203ENST00000539559 PRR20EP86478 221 aa16.63■□□□□ 0.25
TMEM260-203ENST00000539559 PRR20CP86479 221 aa16.63■□□□□ 0.25
TMEM260-203ENST00000539559 PRR20DP86480 221 aa16.63■□□□□ 0.25
TMEM260-203ENST00000539559 PRR20BP86481 221 aa16.63■□□□□ 0.25
TMEM260-203ENST00000539559 PRR20AP86496 221 aa16.63■□□□□ 0.25
TMEM260-203ENST00000539559 CT45A1Q5HYN5 189 aa16.63■□□□□ 0.25
TMEM260-203ENST00000539559 CT45A3Q8NHU0 189 aa16.63■□□□□ 0.25
TMEM260-203ENST00000539559 ENY2Q9NPA8 101 aa16.63■□□□□ 0.25
TMEM260-203ENST00000539559 DSCAMO60469 2012 aa16.62■□□□□ 0.25
TMEM260-203ENST00000539559 NTF3P20783 257 aa16.62■□□□□ 0.25
TMEM260-203ENST00000539559 C21orf62-AS1Q17RA5 79 aa16.62■□□□□ 0.25
TMEM260-203ENST00000539559 MAJINQ3KP22 176 aa16.62■□□□□ 0.25
TMEM260-203ENST00000539559 SPATA45Q537H7 98 aa16.62■□□□□ 0.25
TMEM260-203ENST00000539559 DMRTA1Q5VZB9 504 aa16.62■□□□□ 0.25
TMEM260-203ENST00000539559 LYG1Q8N1E2 194 aa16.62■□□□□ 0.25
TMEM260-203ENST00000539559 DDB2Q92466 427 aa16.62■□□□□ 0.25
TMEM260-203ENST00000539559 FAM168AQ92567 244 aa16.62■□□□□ 0.25
TMEM260-203ENST00000539559 ZNF586Q9NXT0 402 aa16.62■□□□□ 0.25
TMEM260-203ENST00000539559 CALYQ9NYX4 217 aa16.62■□□□□ 0.25
TMEM260-203ENST00000539559 GCSAMQ8N6F7 178 aa16.62■□□□□ 0.25
TMEM260-203ENST00000539559 OR4S2Q8NH73 311 aa16.62■□□□□ 0.25
TMEM260-203ENST00000539559 GNB1LQ9BYB4 327 aa16.62■□□□□ 0.25
TMEM260-203ENST00000539559 IDI2-AS1Q9NZ38 188 aa16.62■□□□□ 0.25
TMEM260-203ENST00000539559 FAM90A9PA6NNJ1 464 aa16.61■□□□□ 0.25
TMEM260-203ENST00000539559 HSPE1P61604 102 aaKnown RBP16.61■□□□□ 0.25
TMEM260-203ENST00000539559 RAB31Q13636 194 aa16.61■□□□□ 0.25
TMEM260-203ENST00000539559 C9orf106Q8NAJ2 232 aa16.61■□□□□ 0.25
TMEM260-203ENST00000539559 BMPR1BO00238 502 aa16.61■□□□□ 0.25
TMEM260-203ENST00000539559 KIR2DL2P43627 348 aaPredicted RBP16.61■□□□□ 0.25
TMEM260-203ENST00000539559 CX3CL1P78423 397 aa16.61■□□□□ 0.25
TMEM260-203ENST00000539559 MORN5Q5VZ52 161 aa16.61■□□□□ 0.25
TMEM260-203ENST00000539559 VHLLQ6RSH7 139 aa16.61■□□□□ 0.25
TMEM260-203ENST00000539559 MOGAT3Q86VF5 341 aa16.61■□□□□ 0.25
TMEM260-203ENST00000539559 OR9G1Q8NH87 305 aa16.61■□□□□ 0.25
TMEM260-203ENST00000539559 CLCF1Q9UBD9 225 aa16.61■□□□□ 0.25
TMEM260-203ENST00000539559 TRAV5A0A0B4J249 113 aa16.6■□□□□ 0.25
TMEM260-203ENST00000539559 AREGP15514 252 aa16.6■□□□□ 0.25
TMEM260-203ENST00000539559 OR51B2Q9Y5P1 312 aa16.6■□□□□ 0.25
TMEM260-203ENST00000539559 TRAV9-1A0A075B6T8 112 aa16.6■□□□□ 0.25
TMEM260-203ENST00000539559 IGHV2OR16-5A0A0B4J2B6 119 aa16.6■□□□□ 0.25
TMEM260-203ENST00000539559 TRGV8A0A0C4DH27 118 aa16.6■□□□□ 0.25
TMEM260-203ENST00000539559 LCN12Q6JVE5 192 aa16.6■□□□□ 0.25
TMEM260-203ENST00000539559 Q6ZVH6 145 aa16.6■□□□□ 0.25
TMEM260-203ENST00000539559 FDCSPQ8NFU4 85 aa16.6■□□□□ 0.25
TMEM260-203ENST00000539559 CHODLQ9H9P2 273 aa16.6■□□□□ 0.25
TMEM260-203ENST00000539559 PLEKHA3Q9HB20 300 aa16.6■□□□□ 0.25
TMEM260-203ENST00000539559 TMEM14BQ9NUH8 114 aa16.6■□□□□ 0.25
TMEM260-203ENST00000539559 IL19Q9UHD0 177 aa16.6■□□□□ 0.25
TMEM260-203ENST00000539559 IGHV1-18A0A0C4DH31 117 aa16.59■□□□□ 0.25
TMEM260-203ENST00000539559 MGST3O14880 152 aa16.59■□□□□ 0.25
TMEM260-203ENST00000539559 NBL1P41271 181 aa16.59■□□□□ 0.25
TMEM260-203ENST00000539559 TIGITQ495A1 244 aa16.59■□□□□ 0.25
TMEM260-203ENST00000539559 STARD4Q96DR4 205 aa16.59■□□□□ 0.25
TMEM260-203ENST00000539559 RBM14Q96PK6 669 aaKnown RBP16.59■□□□□ 0.25
TMEM260-203ENST00000539559 SLC45A2Q9UMX9 530 aa16.59■□□□□ 0.25
TMEM260-203ENST00000539559 IGLV2-8P01709 118 aa16.59■□□□□ 0.25
TMEM260-203ENST00000539559 WT1P19544 449 aaPredicted RBP16.59■□□□□ 0.25
TMEM260-203ENST00000539559 TRAT1Q6PIZ9 186 aa16.59■□□□□ 0.25
TMEM260-203ENST00000539559 DEFB108BQ8NET1 73 aa16.59■□□□□ 0.25
TMEM260-203ENST00000539559 NEUROG1Q92886 237 aa16.59■□□□□ 0.25
TMEM260-203ENST00000539559 CDC42EP3Q9UKI2 254 aa16.59■□□□□ 0.25
TMEM260-203ENST00000539559 CNOT1A5YKK6 2376 aaKnown RBP16.59■□□□□ 0.25
TMEM260-203ENST00000539559 SRRM5B3KS81 715 aa16.58■□□□□ 0.25
TMEM260-203ENST00000539559 IGHV3-48P01763 117 aa16.58■□□□□ 0.25
TMEM260-203ENST00000539559 IGKV1-16P04430 117 aa16.58■□□□□ 0.25
TMEM260-203ENST00000539559 C3orf79P0CE67 100 aa16.58■□□□□ 0.25
TMEM260-203ENST00000539559 RAB7AP51149 207 aa16.58■□□□□ 0.25
TMEM260-203ENST00000539559 C17orf58Q2M2W7 97 aa16.58■□□□□ 0.25
TMEM260-203ENST00000539559 C1orf174Q8IYL3 243 aa16.58■□□□□ 0.25
TMEM260-203ENST00000539559 STPG4Q8N801 248 aa16.58■□□□□ 0.25
TMEM260-203ENST00000539559 KCNS1Q96KK3 526 aa16.58■□□□□ 0.25
TMEM260-203ENST00000539559 J3QR06 171 aa16.58■□□□□ 0.24
TMEM260-203ENST00000539559 SPRY3O43610 288 aa16.58■□□□□ 0.24
TMEM260-203ENST00000539559 MMP23AO75900 390 aa16.58■□□□□ 0.24
TMEM260-203ENST00000539559 IBA57Q5T440 356 aaKnown RBP16.58■□□□□ 0.24
TMEM260-203ENST00000539559 C11orf42Q8N5U0 333 aa16.58■□□□□ 0.24
TMEM260-203ENST00000539559 OR10W1Q8NGF6 305 aa16.58■□□□□ 0.24
TMEM260-203ENST00000539559 OR2V2Q96R30 315 aa16.58■□□□□ 0.24
TMEM260-203ENST00000539559 LAMA5O15230 3695 aa16.57■□□□□ 0.24
TMEM260-203ENST00000539559 SRRM4A7MD48 611 aaKnown RBP16.57■□□□□ 0.24
TMEM260-203ENST00000539559 CTRLP40313 264 aa16.57■□□□□ 0.24
TMEM260-203ENST00000539559 MRPS11P82912 194 aaKnown RBP16.57■□□□□ 0.24
TMEM260-203ENST00000539559 SLAQ13239 276 aa16.57■□□□□ 0.24
TMEM260-203ENST00000539559 SNRNP40Q96DI7 357 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms