RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 UCP3P55916 312 aa16.65■□□□□ 0.26
SCARB1-206ENST00000539320 RNASE12Q5GAN4 147 aaKnown RBP16.65■□□□□ 0.26
SCARB1-206ENST00000539320 OR1L6Q8NGR2 347 aa16.65■□□□□ 0.26
SCARB1-206ENST00000539320 AP3S1Q92572 193 aa16.65■□□□□ 0.26
SCARB1-206ENST00000539320 ATP6V0BQ99437 205 aa16.65■□□□□ 0.26
SCARB1-206ENST00000539320 NAA50Q9GZZ1 169 aaKnown RBP16.65■□□□□ 0.26
SCARB1-206ENST00000539320 IGHV3-21A0A0B4J1V1 117 aa16.64■□□□□ 0.25
SCARB1-206ENST00000539320 M0QYG6 137 aa16.64■□□□□ 0.25
SCARB1-206ENST00000539320 ANKRD55Q3KP44 614 aa16.64■□□□□ 0.25
SCARB1-206ENST00000539320 SPSB3Q6PJ21 355 aa16.64■□□□□ 0.25
SCARB1-206ENST00000539320 SEC22AQ96IW7 307 aa16.64■□□□□ 0.25
SCARB1-206ENST00000539320 K7EIM0 57 aa16.63■□□□□ 0.25
SCARB1-206ENST00000539320 CTF1Q16619 201 aa16.63■□□□□ 0.25
SCARB1-206ENST00000539320 RBPMS2Q6ZRY4 209 aaKnown RBP16.63■□□□□ 0.25
SCARB1-206ENST00000539320 SCARB1Q8WTV0 552 aa16.63■□□□□ 0.25
SCARB1-206ENST00000539320 DAZ1Q9NQZ3 744 aaKnown RBP16.63■□□□□ 0.25
SCARB1-206ENST00000539320 CSMD3Q7Z407 3707 aa16.62■□□□□ 0.25
SCARB1-206ENST00000539320 F8W735 103 aaPredicted RBP16.62■□□□□ 0.25
SCARB1-206ENST00000539320 NDUFA4O00483 81 aa16.62■□□□□ 0.25
SCARB1-206ENST00000539320 IGKV1-39P01597 117 aa16.62■□□□□ 0.25
SCARB1-206ENST00000539320 IGKV1D-39P04432 117 aa16.62■□□□□ 0.25
SCARB1-206ENST00000539320 Q56UQ5 140 aa16.62■□□□□ 0.25
SCARB1-206ENST00000539320 RNASE10Q5GAN6 216 aaKnown RBP16.62■□□□□ 0.25
SCARB1-206ENST00000539320 H2BFWTQ7Z2G1 175 aa16.62■□□□□ 0.25
SCARB1-206ENST00000539320 UBAC2Q8NBM4 344 aa16.62■□□□□ 0.25
SCARB1-206ENST00000539320 OR1P1Q8NH06 330 aa16.62■□□□□ 0.25
SCARB1-206ENST00000539320 OR4A16Q8NH70 328 aa16.62■□□□□ 0.25
SCARB1-206ENST00000539320 MRGPRFQ96AM1 343 aa16.62■□□□□ 0.25
SCARB1-206ENST00000539320 CHRDL1Q9BU40 450 aa16.62■□□□□ 0.25
SCARB1-206ENST00000539320 EXTL2Q9UBQ6 330 aa16.62■□□□□ 0.25
SCARB1-206ENST00000539320 PGAM2P15259 253 aa16.61■□□□□ 0.25
SCARB1-206ENST00000539320 ZNF182P17025 639 aaPredicted RBP16.61■□□□□ 0.25
SCARB1-206ENST00000539320 OR2C3Q8N628 320 aa16.61■□□□□ 0.25
SCARB1-206ENST00000539320 C5orf66Q9H5L9 145 aa16.61■□□□□ 0.25
SCARB1-206ENST00000539320 LCE6AA0A183 80 aa16.6■□□□□ 0.25
SCARB1-206ENST00000539320 ADMP35318 185 aa16.6■□□□□ 0.25
SCARB1-206ENST00000539320 RND3P61587 244 aa16.6■□□□□ 0.25
SCARB1-206ENST00000539320 PRCDQ00LT1 54 aa16.6■□□□□ 0.25
SCARB1-206ENST00000539320 ARRDC1Q8N5I2 433 aa16.6■□□□□ 0.25
SCARB1-206ENST00000539320 OR52I2Q8NH67 350 aa16.6■□□□□ 0.25
SCARB1-206ENST00000539320 SPAG8Q99932 426 aaPredicted RBP16.6■□□□□ 0.25
SCARB1-206ENST00000539320 GGTLC1Q9BX51 225 aa16.6■□□□□ 0.25
SCARB1-206ENST00000539320 KLK11Q9UBX7 282 aa16.6■□□□□ 0.25
SCARB1-206ENST00000539320 TBPP20226 339 aa16.59■□□□□ 0.25
SCARB1-206ENST00000539320 GPR107Q5VW38 600 aa16.59■□□□□ 0.25
SCARB1-206ENST00000539320 LHFPL1Q86WI0 220 aa16.59■□□□□ 0.25
SCARB1-206ENST00000539320 ZNF114Q8NC26 417 aa16.59■□□□□ 0.25
SCARB1-206ENST00000539320 MISP3Q96FF7 219 aa16.59■□□□□ 0.25
SCARB1-206ENST00000539320 ZNF486Q96H40 463 aaPredicted RBP16.59■□□□□ 0.25
SCARB1-206ENST00000539320 C20orf24Q9BUV8 137 aa16.59■□□□□ 0.25
SCARB1-206ENST00000539320 GAR1Q9NY12 217 aaKnown RBP16.59■□□□□ 0.25
SCARB1-206ENST00000539320 MTFP1Q9UDX5 166 aa16.59■□□□□ 0.25
SCARB1-206ENST00000539320 DNAH1Q9P2D7 4330 aa16.58■□□□□ 0.25
SCARB1-206ENST00000539320 CD3DP04234 171 aa16.58■□□□□ 0.24
SCARB1-206ENST00000539320 MRPS26Q9BYN8 205 aaKnown RBP16.58■□□□□ 0.24
SCARB1-206ENST00000539320 LYSTQ99698 3801 aa16.58■□□□□ 0.24
SCARB1-206ENST00000539320 LOC102724200A0A096LPH7 203 aaPredicted RBP16.57■□□□□ 0.24
SCARB1-206ENST00000539320 TSPAN4O14817 238 aa16.57■□□□□ 0.24
SCARB1-206ENST00000539320 PI3P19957 117 aa16.57■□□□□ 0.24
SCARB1-206ENST00000539320 PPP5CP53041 499 aa16.57■□□□□ 0.24
SCARB1-206ENST00000539320 PIGPP57054 158 aa16.57■□□□□ 0.24
SCARB1-206ENST00000539320 HSPE1P61604 102 aaKnown RBP16.57■□□□□ 0.24
SCARB1-206ENST00000539320 LAMTOR1Q6IAA8 161 aa16.57■□□□□ 0.24
SCARB1-206ENST00000539320 IL17DQ8TAD2 202 aa16.57■□□□□ 0.24
SCARB1-206ENST00000539320 IGHV3OR16-8A0A075B7F1 116 aa16.56■□□□□ 0.24
SCARB1-206ENST00000539320 I3L2K1 104 aa16.56■□□□□ 0.24
SCARB1-206ENST00000539320 K7EMT4 169 aa16.56■□□□□ 0.24
SCARB1-206ENST00000539320 ZNF207O43670 478 aaKnown RBP16.56■□□□□ 0.24
SCARB1-206ENST00000539320 FCGR2BP31994 310 aaPredicted RBP16.56■□□□□ 0.24
SCARB1-206ENST00000539320 AKR1C2P52895 323 aa16.56■□□□□ 0.24
SCARB1-206ENST00000539320 RELQ04864 619 aaPredicted RBP16.56■□□□□ 0.24
SCARB1-206ENST00000539320 C15orf40Q8WUR7 153 aa16.56■□□□□ 0.24
SCARB1-206ENST00000539320 ABHD1Q96SE0 405 aa16.56■□□□□ 0.24
SCARB1-206ENST00000539320 C15orf62A8K5M9 175 aa16.55■□□□□ 0.24
SCARB1-206ENST00000539320 NUPL2O15504 423 aaKnown RBP16.55■□□□□ 0.24
SCARB1-206ENST00000539320 CTSGP08311 255 aa16.55■□□□□ 0.24
SCARB1-206ENST00000539320 MFAP4P55083 255 aa16.55■□□□□ 0.24
SCARB1-206ENST00000539320 IZUMO4Q1ZYL8 232 aa16.55■□□□□ 0.24
SCARB1-206ENST00000539320 TP53RKQ96S44 253 aa16.55■□□□□ 0.24
SCARB1-206ENST00000539320 MT-CO2P00403 227 aa16.54■□□□□ 0.24
SCARB1-206ENST00000539320 IGKV1-5P01602 117 aa16.54■□□□□ 0.24
SCARB1-206ENST00000539320 CD74P04233 296 aa16.54■□□□□ 0.24
SCARB1-206ENST00000539320 TAS2R19P59542 299 aa16.54■□□□□ 0.24
SCARB1-206ENST00000539320 ERHP84090 104 aaKnown RBP16.54■□□□□ 0.24
SCARB1-206ENST00000539320 SPINK9Q5DT21 86 aa16.54■□□□□ 0.24
SCARB1-206ENST00000539320 GPR141Q7Z602 305 aa16.54■□□□□ 0.24
SCARB1-206ENST00000539320 TMEM229BQ8NBD8 167 aa16.54■□□□□ 0.24
SCARB1-206ENST00000539320 ZNF414Q96IQ9 312 aa16.54■□□□□ 0.24
SCARB1-206ENST00000539320 TXN2Q99757 166 aa16.54■□□□□ 0.24
SCARB1-206ENST00000539320 MIXL1Q9H2W2 232 aa16.54■□□□□ 0.24
SCARB1-206ENST00000539320 COPZ2Q9P299 210 aa16.54■□□□□ 0.24
SCARB1-206ENST00000539320 UBQLN2Q9UHD9 624 aa16.54■□□□□ 0.24
SCARB1-206ENST00000539320 OR4C46A6NHA9 309 aa16.53■□□□□ 0.24
SCARB1-206ENST00000539320 ATG12O94817 140 aa16.53■□□□□ 0.24
SCARB1-206ENST00000539320 P0C879 139 aa16.53■□□□□ 0.24
SCARB1-206ENST00000539320 SLC35G3Q8N808 338 aa16.53■□□□□ 0.24
SCARB1-206ENST00000539320 CCDC71LQ8N9Z2 235 aa16.53■□□□□ 0.24
SCARB1-206ENST00000539320 OR4D10Q8NGI6 311 aa16.53■□□□□ 0.24
SCARB1-206ENST00000539320 PINX1Q96BK5 328 aaKnown RBP16.53■□□□□ 0.24
SCARB1-206ENST00000539320 C3orf85A0A1B0GTC6 90 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms