RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 TAS2R31P59538 309 aa10.24□□□□□ -0.77
SMARCA4-206ENST00000538456 VBP1P61758 197 aa10.24□□□□□ -0.77
SMARCA4-206ENST00000538456 LSM3P62310 102 aaKnown RBP10.24□□□□□ -0.77
SMARCA4-206ENST00000538456 WT1-ASQ06250 92 aa10.24□□□□□ -0.77
SMARCA4-206ENST00000538456 Q56UQ5 140 aa10.24□□□□□ -0.77
SMARCA4-206ENST00000538456 NR2C2APQ86WQ0 139 aa10.24□□□□□ -0.77
SMARCA4-206ENST00000538456 GBGT1Q8N5D6 347 aa10.24□□□□□ -0.77
SMARCA4-206ENST00000538456 DMBX1Q8NFW5 382 aa10.24□□□□□ -0.77
SMARCA4-206ENST00000538456 SRSF8Q9BRL6 282 aaKnown RBP10.24□□□□□ -0.77
SMARCA4-206ENST00000538456 HINT2Q9BX68 163 aa10.24□□□□□ -0.77
SMARCA4-206ENST00000538456 SMPXQ9UHP9 88 aa10.24□□□□□ -0.77
SMARCA4-206ENST00000538456 ETV7Q9Y603 341 aa10.24□□□□□ -0.77
SMARCA4-206ENST00000538456 IGHV3OR16-13A0A075B7E8 117 aa10.23□□□□□ -0.77
SMARCA4-206ENST00000538456 IGHV3-74A0A0B4J1X5 117 aa10.23□□□□□ -0.77
SMARCA4-206ENST00000538456 C15orf62A8K5M9 175 aa10.23□□□□□ -0.77
SMARCA4-206ENST00000538456 F8W735 103 aaPredicted RBP10.23□□□□□ -0.77
SMARCA4-206ENST00000538456 K7EMT4 169 aa10.23□□□□□ -0.77
SMARCA4-206ENST00000538456 RBFOX2O43251 390 aaKnown RBP eCLIP10.23□□□□□ -0.77
SMARCA4-206ENST00000538456 SSX5O60225 188 aa10.23□□□□□ -0.77
SMARCA4-206ENST00000538456 NQO2P16083 231 aa10.23□□□□□ -0.77
SMARCA4-206ENST00000538456 FCGR2CP31995 323 aa10.23□□□□□ -0.77
SMARCA4-206ENST00000538456 ARPC4P59998 168 aa10.23□□□□□ -0.77
SMARCA4-206ENST00000538456 GVQW1Q8N7I0 195 aa10.23□□□□□ -0.77
SMARCA4-206ENST00000538456 OR51H1Q8NH63 302 aa10.23□□□□□ -0.77
SMARCA4-206ENST00000538456 SCARB1Q8WTV0 552 aa10.23□□□□□ -0.77
SMARCA4-206ENST00000538456 RHPN1-AS1Q9BWJ2 59 aa10.23□□□□□ -0.77
SMARCA4-206ENST00000538456 TXNL4BQ9NX01 149 aaKnown RBP10.23□□□□□ -0.77
SMARCA4-206ENST00000538456 IGHV7-4-1A0A0J9YVY3 117 aa10.22□□□□□ -0.77
SMARCA4-206ENST00000538456 CHEK1O14757 476 aa10.22□□□□□ -0.77
SMARCA4-206ENST00000538456 YIF1AO95070 293 aa10.22□□□□□ -0.77
SMARCA4-206ENST00000538456 HPRT1P00492 218 aa10.22□□□□□ -0.77
SMARCA4-206ENST00000538456 TRAPPC2P0DI81 140 aa10.22□□□□□ -0.77
SMARCA4-206ENST00000538456 TRAPPC2BP0DI82 140 aa10.22□□□□□ -0.77
SMARCA4-206ENST00000538456 ZNF182P17025 639 aaPredicted RBP10.22□□□□□ -0.77
SMARCA4-206ENST00000538456 FXYD4P59646 89 aa10.22□□□□□ -0.77
SMARCA4-206ENST00000538456 CATR1Q13166 79 aa10.22□□□□□ -0.77
SMARCA4-206ENST00000538456 TMEM187Q14656 261 aa10.22□□□□□ -0.77
SMARCA4-206ENST00000538456 POU2AF1Q16633 256 aa10.22□□□□□ -0.77
SMARCA4-206ENST00000538456 LINC00336Q6ZUF6 198 aa10.22□□□□□ -0.77
SMARCA4-206ENST00000538456 TMEM116Q8NCL8 245 aa10.22□□□□□ -0.77
SMARCA4-206ENST00000538456 DYNC2LI1Q8TCX1 351 aa10.22□□□□□ -0.77
SMARCA4-206ENST00000538456 TSC22D3Q99576 134 aa10.22□□□□□ -0.77
SMARCA4-206ENST00000538456 SLC5A7Q9GZV3 580 aa10.22□□□□□ -0.77
SMARCA4-206ENST00000538456 F11RQ9Y624 299 aaKnown RBP10.22□□□□□ -0.77
SMARCA4-206ENST00000538456 TEX50A0A1B0GTY4 177 aa10.21□□□□□ -0.77
SMARCA4-206ENST00000538456 A0A1B0GVY2 172 aa10.21□□□□□ -0.77
SMARCA4-206ENST00000538456 C11orf94C9JXX5 98 aa10.21□□□□□ -0.77
SMARCA4-206ENST00000538456 K7EIM0 57 aa10.21□□□□□ -0.77
SMARCA4-206ENST00000538456 PPYP01298 95 aa10.21□□□□□ -0.77
SMARCA4-206ENST00000538456 FCER2P06734 321 aa10.21□□□□□ -0.77
SMARCA4-206ENST00000538456 MED14OSP0DP75 135 aa10.21□□□□□ -0.77
SMARCA4-206ENST00000538456 CMC4P56277 68 aaPredicted RBP10.21□□□□□ -0.77
SMARCA4-206ENST00000538456 AADACL3Q5VUY0 350 aa10.21□□□□□ -0.77
SMARCA4-206ENST00000538456 LEMD1Q68G75 181 aa10.21□□□□□ -0.77
SMARCA4-206ENST00000538456 THOC7Q6I9Y2 204 aaKnown RBP10.21□□□□□ -0.77
SMARCA4-206ENST00000538456 C22orf42Q6IC83 251 aa10.21□□□□□ -0.77
SMARCA4-206ENST00000538456 CMTM3Q96MX0 182 aa10.21□□□□□ -0.77
SMARCA4-206ENST00000538456 CTSGP08311 255 aa10.2□□□□□ -0.78
SMARCA4-206ENST00000538456 TGFBR1P36897 503 aa10.2□□□□□ -0.78
SMARCA4-206ENST00000538456 RELQ04864 619 aaPredicted RBP10.2□□□□□ -0.78
SMARCA4-206ENST00000538456 MSMO1Q15800 293 aa10.2□□□□□ -0.78
SMARCA4-206ENST00000538456 HSD17B13Q7Z5P4 300 aaPredicted RBP10.2□□□□□ -0.78
SMARCA4-206ENST00000538456 TMEM17Q86X19 198 aa10.2□□□□□ -0.78
SMARCA4-206ENST00000538456 Q8NAQ8 132 aa10.2□□□□□ -0.78
SMARCA4-206ENST00000538456 ZBTB34Q8NCN2 500 aa10.2□□□□□ -0.78
SMARCA4-206ENST00000538456 BEST4Q8NFU0 473 aa10.2□□□□□ -0.78
SMARCA4-206ENST00000538456 OR1L8Q8NGR8 309 aa10.2□□□□□ -0.78
SMARCA4-206ENST00000538456 LSM10Q969L4 123 aaKnown RBP10.2□□□□□ -0.78
SMARCA4-206ENST00000538456 ZNF414Q96IQ9 312 aa10.2□□□□□ -0.78
SMARCA4-206ENST00000538456 RNF167Q9H6Y7 350 aa10.2□□□□□ -0.78
SMARCA4-206ENST00000538456 PLEKHA2Q9HB19 425 aa10.2□□□□□ -0.78
SMARCA4-206ENST00000538456 CCDC59Q9P031 241 aaKnown RBP10.2□□□□□ -0.78
SMARCA4-206ENST00000538456 NSG2Q9Y328 171 aa10.2□□□□□ -0.78
SMARCA4-206ENST00000538456 AGRNO00468 2067 aa10.19□□□□□ -0.78
SMARCA4-206ENST00000538456 IGHV4-4A0A075B6R2 117 aa10.19□□□□□ -0.78
SMARCA4-206ENST00000538456 IGHV4-28A0A0C4DH34 117 aa10.19□□□□□ -0.78
SMARCA4-206ENST00000538456 MARCH11A6NNE9 402 aa10.19□□□□□ -0.78
SMARCA4-206ENST00000538456 NUPL2O15504 423 aaKnown RBP10.19□□□□□ -0.78
SMARCA4-206ENST00000538456 FGF2P09038 288 aa10.19□□□□□ -0.78
SMARCA4-206ENST00000538456 HLA-DMBP28068 263 aa10.19□□□□□ -0.78
SMARCA4-206ENST00000538456 ERVK-16P61578 105 aa10.19□□□□□ -0.78
SMARCA4-206ENST00000538456 ZNF818PQ6ZRF7 136 aa10.19□□□□□ -0.78
SMARCA4-206ENST00000538456 Q6ZTC4 211 aa10.19□□□□□ -0.78
SMARCA4-206ENST00000538456 LGALS14Q8TCE9 139 aa10.19□□□□□ -0.78
SMARCA4-206ENST00000538456 GIMAP1Q8WWP7 306 aa10.19□□□□□ -0.78
SMARCA4-206ENST00000538456 ATP6V0BQ99437 205 aa10.19□□□□□ -0.78
SMARCA4-206ENST00000538456 NDUFA4L2Q9NRX3 87 aa10.19□□□□□ -0.78
SMARCA4-206ENST00000538456 COMMD9Q9P000 198 aa10.19□□□□□ -0.78
SMARCA4-206ENST00000538456 TRAV14DV4A0A0A6YYC5 116 aa10.18□□□□□ -0.78
SMARCA4-206ENST00000538456 C15orf61A6NNL5 157 aa10.18□□□□□ -0.78
SMARCA4-206ENST00000538456 RBMY1A1P0DJD3 496 aaKnown RBP10.18□□□□□ -0.78
SMARCA4-206ENST00000538456 RBMY1CP0DJD4 496 aa10.18□□□□□ -0.78
SMARCA4-206ENST00000538456 DEFB131AP59861 70 aa10.18□□□□□ -0.78
SMARCA4-206ENST00000538456 PAFAH1B2P68402 229 aa10.18□□□□□ -0.78
SMARCA4-206ENST00000538456 RBMY1FQ15415 496 aaKnown RBP10.18□□□□□ -0.78
SMARCA4-206ENST00000538456 FAM90A2PQ658T7 463 aa10.18□□□□□ -0.78
SMARCA4-206ENST00000538456 LINC00299Q6ZSB3 139 aa10.18□□□□□ -0.78
SMARCA4-206ENST00000538456 TCF24Q7RTU0 167 aa10.18□□□□□ -0.78
SMARCA4-206ENST00000538456 SLC25A46Q96AG3 418 aa10.18□□□□□ -0.78
SMARCA4-206ENST00000538456 MISP3Q96FF7 219 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms